Contig 004678:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D20Sequence563004678 (2)ref|XP_011084379.1|6e-48PREDICTED: serine/threonine-protein kinase CDL1-like [Sesamum indicum]740004171 (2)ref|XP_009798942.1|6e-105PREDICTED: serine/threonine-protein kinase PBS1-like [Nicotiana sylvestris]
JMFF050O24Sequence636004678 (2)ref|XP_011084379.1|7e-78PREDICTED: serine/threonine-protein kinase CDL1-like [Sesamum indicum]608004171 (2)ref|XP_009798942.1|2e-20PREDICTED: serine/threonine-protein kinase PBS1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF050O24+                                  CATGTAGATGGTCCTCGAGGGATCNTAATGGCATGTA
                      ____________________________________________________________
consensus                                    CATGTAGATGGTCCTCGAGGGATCNTAATGGCATGTA
 
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JMFF013D20+                                ATCTCCATCAGCACAATACCCGATCAAATTGACCAGGTT
JMFF050O24+           CTCATAAACCAATAGTCTTTGATCTCCATCAGCACAATACCCGATCAAATTGACCAGGTT
                      ____________________________________________________________
consensus             CTCATAAACCAATAGTCTTTGATCTCCATCAGCACAATACCCGATCAAATTGACCAGGTT
 
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JMFF013D20+           CGGATGATGAAGTAGGCTCAACATCAGAACCTCAACGAGGGAATTCCCTGTTTCCTTGCA
JMFF050O24+           CGGATGATGAAGTAGGCTCAACATCAGAACCTCAACGA-GGAATTCCCTGTTTCCTTGCA
                      ____________________________________________________________
consensus             CGGATGATGAAGTAGGCTCAACATCAGAACCTCAACGAGGGAATTCCCTGTTTCCTTGCA
 
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JMFF013D20+           ATCCATTTCGATCTAGTTGTTTGATAGCGACAATCTGATTCGTGCTCTCTAAACGCCCCT
JMFF050O24+           ATCCATTTCGATCTAGTTGTTTGATAGCGACAATCTGATTCGTGCTCTCTAAACGCCCCT
                      ____________________________________________________________
consensus             ATCCATTTCGATCTAGTTGTTTGATAGCGACAATCTGATTCGTGCTCTCTAAACGCCCCT
 
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JMFF013D20+           TGTATACCCTGCCAAATCCTCCCTCACCTAAAAGACAGTCGGCCCTGAAATTCTTCGTTG
JMFF050O24+           TGTATACCCTGCCAAATCCTCCCTCACCTAAAAGACAGTCGGCCCTGAAATTCTTCGTTG
                      ____________________________________________________________
consensus             TGTATACCCTGCCAAATCCTCCCTCACCTAAAAGACAGTCGGCCCTGAAATTCTTCGTTG
 
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JMFF013D20+           CAGCAGCCAATTCACGAAATCTAAATGTATGGGCAGCAATACGACCCGAACCTCCATTCT
JMFF050O24+           CAGCAGCCAATTCACGAAATCTAAATGTATGGGCAGCAATACGACCCGAACCTCCATTCT
                      ____________________________________________________________
consensus             CAGCAGCCAATTCACGAAATCTAAATGTATGGGCAGCAATACGACCCGAACCTCCATTCT
 
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JMFF013D20+           TCGATCCTTCCTTTCTTTCGTCCAGTGAAGAATCCAGCTTTACTTTATCTGAAACTAATG
JMFF050O24+           TCGATCCTTCCTTTCTTTCGTCCAGTGAAGAATCCAGCTTTACTTTATCTGAAACTAATG
                      ____________________________________________________________
consensus             TCGATCCTTCCTTTCTTTCGTCCAGTGAAGAATCCAGCTTTACTTTATCTGAAACTAATG
 
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JMFF013D20+           TTGATGGGATCTGATCATCGGACTTATTGCTTTGCTGCTGCTTTGTTTTGTTCTTTGATT
JMFF050O24+           TTGATGGGATCTGATCATCGGACTTATTGCTTTGCTGCTGCTTTGTTTTGTTCTTTGATT
                      ____________________________________________________________
consensus             TTGATGGGATCTGATCATCGGACTTATTGCTTTGCTGCTGCTTTGTTTTGTTCTTTGATT
 
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JMFF013D20+           TCCCAGTGCAAAGGAACAAACCCATTGTTGTATACTTTGAGTAAGTTTGTCAGTGGCTCT
JMFF050O24+           TCCCAGTGCAAAGGAACAAACCCATTGTTGTATACTTTGAGTAAGTTTGTCAGTGGCTCT
                      ____________________________________________________________
consensus             TCCCAGTGCAAAGGAACAAACCCATTGTTGTATACTTTGAGTAAGTTTGTCAGTGGCTCT
 
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JMFF013D20+           CCTTGAGATAGACAGAGAAGGAAGAGACGGGAAGGGAATGGAAGGGAAAGGAAATGAAGG
JMFF050O24+           CCTTGAGATAGACAGAGAAGGAAGAGACGGGAAGGGAATGGAAGGGAAAGGAAATGAAGG
                      ____________________________________________________________
consensus             CCTTGAGATAGACAGAGAAGGAAGAGACGGGAAGGGAATGGAAGGGAAAGGAAATGAAGG
 
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JMFF013D20+           AGAGAGAAGGAGACCAAACAGGATTTCAGACAGCAGAGAGAGAT                
JMFF050O24+           AGAGAGAAGGAGACCAAACAGGATTTCAGACAGCAGAGAGAGATGGATTAAAATTCGGAC
                      ____________________________________________________________
consensus             AGAGAGAAGGAGACCAAACAGGATTTCAGACAGCAGAGAGAGATGGATTAAAATTCGGAC