Contig 004674:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027P23Sequence561004674 (3)emb|CAC19789.1|1e-18MYB-like DNA-binding protein [Catharanthus roseus]751005565 (3)dbj|BAF38405.1|2e-71telomere binding protein [Nicotiana tabacum]
JMFF050I07Sequence617004674 (3)emb|CAC19789.1|9e-20MYB-like DNA-binding protein [Catharanthus roseus]608005565 (3)ref|XP_009785792.1|6e-52PREDICTED: telomere repeat-binding protein 3-like isoform X1 [Nicotiana sylvest
JMSF037J03Sequence683004674 (3)emb|CAC19789.1|6e-21MYB-like DNA-binding protein [Catharanthus roseus]728005565 (3)dbj|BAF38405.1|7e-72telomere binding protein [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037J03+ TACAGTGCGATCGTTAGCTACAGTTAAGTCTTCTTCTATATGCGTTTCAATTTCAATC
                      ____________________________________________________________
consensus TACAGTGCGATCGTTAGCTACAGTTAAGTCTTCTTCTATATGCGTTTCAATTTCAATC
 
. : . : . : . : . : . :
JMSF037J03+ CCGAGTTTGCCATTGCCATTAAACACCTTCGAAGTCTGTTCCTGGAGCGAACAATCTTTG
JMFF050I07+ GGAGCGAACAATCTTTG
                      ____________________________________________________________
consensus CCGAGTTTGCCATTGCCATTAAACACCTTCGAAGTCTGTTCCTGGAGCGAACAATCTTTG
 
. : . : . : . : . : . :
JMSF037J03+ GGATACAAAGATCCACCAAAACCATTATCCTCGATTTTCTGCACTTCAATAACGGGATCA
JMFF027P23+ TGCACTTCAATAACGGGATCA
JMFF050I07+ GGATACAAAGATCCACCAAAACCATTATCCTCGATNTTCTGCACTTCAATAACGGGATCA
                      ____________________________________________________________
consensus GGATACAAAGATCCACCAAAACCATTATCCTCGATTTTCTGCACTTCAATAACGGGATCA
 
. : . : . : . : . : . :
JMSF037J03+ GATACCGAGCTTCCCTGATCAGATTTCACATATTTCCCTGAAGCTTCAATCTTTTCTTGC
JMFF027P23+ GATACCGAGCTTCCCTGATCAGATTTCACATATTTCCCTGAAGCTTCAATCTTTTCTTGC
JMFF050I07+ GATACCGAGCTTCCCTGATCAGATTTCACATATTTCCCTGAAGCTTCAATCTTTTCTTGC
                      ____________________________________________________________
consensus GATACCGAGCTTCCCTGATCAGATTTCACATATTTCCCTGAAGCTTCAATCTTTTCTTGC
 
. : . : . : . : . : . :
JMSF037J03+ TTAACAATACCTTTCTCCTCATCTGCAGCAATATTACTAGAAGCAGAGCTTTCACTCTCC
JMFF027P23+ TTAACAATACCTTTCTCNTCATCTGCAGCAATATTACTAGAAGCAGAGCTTTCACTCTCN
JMFF050I07+ TTAACAATACCTTTCTCCTCATCTGCAGCAATATTACTAGAAGCAGAGCTTTCACTCTCC
                      ____________________________________________________________
consensus TTAACAATACCTTTCTCCTCATCTGCAGCAATATTACTAGAAGCAGAGCTTTCACTCTCC
 
. : . : . : . : . : . :
JMSF037J03+ TGCAAAAGCTTCCCAGCCACAGTGGCCAACAATTCAAATGCACAAATTTGATTATCCTCC
JMFF027P23+ TGCAAAAGCTTCCCAGCCACAGTGGCCAACAATTCAAATGCACAAATTTGATTATCCTCC
JMFF050I07+ TGCAAAAGCTTCCCAGCCACAGTGGCCAACAATTCAAATGCACAAATTTGATTATCCTCC
                      ____________________________________________________________
consensus TGCAAAAGCTTCCCAGCCACAGTGGCCAACAATTCAAATGCACAAATTTGATTATCCTCC
 
. : . : . : . : . : . :
JMSF037J03+ AAACTTTTGAGGGGGTGTCTCCTTCGAACTGATCTGGGACCTCTAGGCACACAGGGAATC
JMFF027P23+ AAACTTTTGAGGGGGTGTCTCCTTCGAACTGATCTGGGACCTCTAGGCACACAGGGAATC
JMFF050I07+ AAACTTTTGAGGGGGTGTCTCCTTCGAACTGATCTGGGACCTCTAGGCACACAGGGAATC
                      ____________________________________________________________
consensus AAACTTTTGAGGGGGTGTCTCCTTCGAACTGATCTGGGACCTCTAGGCACACAGGGAATC
 
. : . : . : . : . : . :
JMSF037J03+ TGAAACCCACCAAAACCATACTCCAATCTCTTCTTCAGCACCATCTCTTAACCAGCATAC
JMFF027P23+ TGAAACCCACCAAAACCATACTCCAATCTCTTCTTCAGCACCATCTCTTAACCAGCATAC
JMFF050I07+ TGAAACCCACCAAAACCATACTCCAATCTCTTCTTCAGCACCATCTCTTAACCAGCATAC
                      ____________________________________________________________
consensus TGAAACCCACCAAAACCATACTCCAATCTCTTCTTCAGCACCATCTCTTAACCAGCATAC
 
. : . : . : . : . : . :
JMSF037J03+ CAAGAACAGATAACTATGTGCAGTGAAATTATGGTAATTTGATCTGAGGTGAAGAAAAAC
JMFF027P23+ CAAGAACAGATAACTATGTGCAGTGAAATTATGGTAATTTGATCTGAGGTGAAGAAAAAC
JMFF050I07+ CAAGAACAGATAACTATGTGCAGTGAAATTATGGTAATTTGATCTGAGGTGAAGAAAAAC
                      ____________________________________________________________
consensus CAAGAACAGATAACTATGTGCAGTGAAATTATGGTAATTTGATCTGAGGTGAAGAAAAAC
 
. : . : . : . : . : . :
JMSF037J03+ TGTACAGATTCAGTGTGGTAAGAATGAAAGAATGAACATTTTTGTATACATAATTTGATC
JMFF027P23+ TGTACAGATTCAGTGTGGTAAGAATGAAAGAATGAACATTTTTGTATACATAATTTGATC
JMFF050I07+ TGTACAGATTCAGTGTGGTAAGAATGAAAGAATGAACATTTTTGTATACATAATTTGATC
                      ____________________________________________________________
consensus TGTACAGATTCAGTGTGGTAAGAATGAAAGAATGAACATTTTTGTATACATAATTTGATC
 
. : . : . : . : . : . :
JMSF037J03+ CAAGTGAAGAAGTTGTGGACAGGATTTGAAAACCTCCGAGCTTGGGTGAAAAACACACAA
JMFF027P23+ CAAGTGAAGAAGTTGTGGACAGGATTTGAAAACCTCCGAGCTTGGGTGAAAAACACACAA
JMFF050I07+ CAAGTGAAGAAGTTGTGGACAGGATTTGAAAACCTCCGAGCTTGGGTGAAAAACACACAA
                      ____________________________________________________________
consensus CAAGTGAAGAAGTTGTGGACAGGATTTGAAAACCTCCGAGCTTGGGTGAAAAACACACAA
 
. : . : . : . : . : . :
JMSF037J03+ CCAAACAGTGCTTAAACCCCTTTC
JMFF027P23+ CCAAACAGTGCTTAAACCCCTTTCTCTCTCTCTCTCTCTCTCTCCCTCTATCTCTGATGC
JMFF050I07+ CCAAACAGTGCTTAAACCCCTTTCTCTCTCTCTCTCTCTCTCTCCCTCTATCTCTGATGC
                      ____________________________________________________________
consensus CCAAACAGTGCTTAAACCCCTTTCTCTCTCTCTCTCTCTCTCTCCCTCTATCTCTGATGC