Contig 004670:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049J12Sequence615004670 (2)ref|XP_009759204.1|8e-67PREDICTED: arogenate dehydrogenase 1, chloroplastic-like isoform X2 [Nicotiana 359013849 (2)ref|XP_004240892.1|8e-21PREDICTED: arogenate dehydrogenase 1, chloroplastic-like [Solanum lycopersicum]
JMSF004O15Sequence219004670 (2)

Alignment

This contig is upended


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JMFF049J12+ AGCCAAGTCTTTCCA
                      ____________________________________________________________
consensus AGCCAAGTCTTTCCA
 
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JMFF049J12+ CCCATCTCTCCCGCTTTCTGGTCCAAACATCGGGTGAGTGCAGAGCAAGTCCGAGTCCTC
                      ____________________________________________________________
consensus CCCATCTCTCCCGCTTTCTGGTCCAAACATCGGGTGAGTGCAGAGCAAGTCCGAGTCCTC
 
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JMFF049J12+ GGGCAACACCTGCAGAAGGATATCTCTGGGGTGTTCTTTTACTGACAGTACGTCGACAAA
                      ____________________________________________________________
consensus GGGCAACACCTGCAGAAGGATATCTCTGGGGTGTTCTTTTACTGACAGTACGTCGACAAA
 
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JMFF049J12+ GAGTGTTTGCCGTCTCAGGCAATGAAATGGCATAGACTTGACAACTTGTTTTAGCGACAG
                      ____________________________________________________________
consensus GAGTGTTTGCCGTCTCAGGCAATGAAATGGCATAGACTTGACAACTTGTTTTAGCGACAG
 
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JMFF049J12+ GATTGATGTGCATATAAGTATAGCATCATTGTCTGATTCGAAAAGCGCAGCCATATCCCT
                      ____________________________________________________________
consensus GATTGATGTGCATATAAGTATAGCATCATTGTCTGATTCGAAAAGCGCAGCCATATCCCT
 
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JMFF049J12+ GTAGAATGATGCTATTCCGAGATGTTTGCAGACTTCTGAGTAATCTGATCTCGAAGATGC
                      ____________________________________________________________
consensus GTAGAATGATGCTATTCCGAGATGTTTGCAGACTTCTGAGTAATCTGATCTCGAAGATGC
 
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JMFF049J12+ TGTTATGGAATGGCCTTGTTTGATCATGGTTTTTGCCAGGAACTGGGCGAAAGGGCCAAA
                      ____________________________________________________________
consensus TGTTATGGAATGGCCTTGTTTGATCATGGTTTTTGCCAGGAACTGGGCGAAAGGGCCAAA
 
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JMSF004O15+ TCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
JMFF049J12+ CCCAACAATTCCAATCTTCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
                      ____________________________________________________________
consensus CCCAACAATTCCAATCTTCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
 
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JMSF004O15+ GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
JMFF049J12+ GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
                      ____________________________________________________________
consensus GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
 
. : . : . : . : . : . :
JMSF004O15+ TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
JMFF049J12+ TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
                      ____________________________________________________________
consensus TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
 
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JMSF004O15+ GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGC
JMFF049J12+ GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGCTCAAATT
                      ____________________________________________________________
consensus GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGCTCAAATT