clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF049J12 | Sequence | 615 | 004670 (2) | ref|XP_009759204.1| | 8e-67 | PREDICTED: arogenate dehydrogenase 1, chloroplastic-like isoform X2 [Nicotiana | 359 | 013849 (2) | ref|XP_004240892.1| | 8e-21 | PREDICTED: arogenate dehydrogenase 1, chloroplastic-like [Solanum lycopersicum] |
JMSF004O15 | Sequence | 219 | 004670 (2) |
This contig is upended
. : . : . : . : . : . :
JMFF049J12+ AGCCAAGTCTTTCCA
____________________________________________________________
consensus AGCCAAGTCTTTCCA
. : . : . : . : . : . :
JMFF049J12+ CCCATCTCTCCCGCTTTCTGGTCCAAACATCGGGTGAGTGCAGAGCAAGTCCGAGTCCTC
____________________________________________________________
consensus CCCATCTCTCCCGCTTTCTGGTCCAAACATCGGGTGAGTGCAGAGCAAGTCCGAGTCCTC
. : . : . : . : . : . :
JMFF049J12+ GGGCAACACCTGCAGAAGGATATCTCTGGGGTGTTCTTTTACTGACAGTACGTCGACAAA
____________________________________________________________
consensus GGGCAACACCTGCAGAAGGATATCTCTGGGGTGTTCTTTTACTGACAGTACGTCGACAAA
. : . : . : . : . : . :
JMFF049J12+ GAGTGTTTGCCGTCTCAGGCAATGAAATGGCATAGACTTGACAACTTGTTTTAGCGACAG
____________________________________________________________
consensus GAGTGTTTGCCGTCTCAGGCAATGAAATGGCATAGACTTGACAACTTGTTTTAGCGACAG
. : . : . : . : . : . :
JMFF049J12+ GATTGATGTGCATATAAGTATAGCATCATTGTCTGATTCGAAAAGCGCAGCCATATCCCT
____________________________________________________________
consensus GATTGATGTGCATATAAGTATAGCATCATTGTCTGATTCGAAAAGCGCAGCCATATCCCT
. : . : . : . : . : . :
JMFF049J12+ GTAGAATGATGCTATTCCGAGATGTTTGCAGACTTCTGAGTAATCTGATCTCGAAGATGC
____________________________________________________________
consensus GTAGAATGATGCTATTCCGAGATGTTTGCAGACTTCTGAGTAATCTGATCTCGAAGATGC
. : . : . : . : . : . :
JMFF049J12+ TGTTATGGAATGGCCTTGTTTGATCATGGTTTTTGCCAGGAACTGGGCGAAAGGGCCAAA
____________________________________________________________
consensus TGTTATGGAATGGCCTTGTTTGATCATGGTTTTTGCCAGGAACTGGGCGAAAGGGCCAAA
. : . : . : . : . : . :
JMSF004O15+ TCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
JMFF049J12+ CCCAACAATTCCAATCTTCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
____________________________________________________________
consensus CCCAACAATTCCAATCTTCATGGTTTGTTTCTGATGATGACAAAGAACAAGTAGACATGA
. : . : . : . : . : . :
JMSF004O15+ GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
JMFF049J12+ GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
____________________________________________________________
consensus GAGAAAAATGATGTGTTGATGAGGTTTTAAGGTAACACTAAACTGTAGTGATATGTATTG
. : . : . : . : . : . :
JMSF004O15+ TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
JMFF049J12+ TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
____________________________________________________________
consensus TCTGGAATGGGAGATCCTTGCACGTCTCTTCTTAGCAAAGGTTGGGGATCGGATATGGTT
. : . : . : . : . : . :
JMSF004O15+ GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGC
JMFF049J12+ GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGCTCAAATT
____________________________________________________________
consensus GATCCATTGGCACTTGGCAGATGCTGAGTAGAGTCTCACCCTCTCAGCTCAGCTCAAATT