Contig 004669:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF049G02-                   AAAACCTTTTTCAGTCTAGAGTGCAATCCAACATGAGGAATCAGAAGCCAG
rJMFF007M06-                                GTCTAGAGTGCAATCCAACATGAGGAATCAGAAGCCAG
                      ____________________________________________________________
consensus                      AAAACCTTTTTCAGTCTAGAGTGCAATCCAACATGAGGAATCAGAAGCCAG
 
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rJMFF049G02-          GATTCATCATTTACATGCACAAGTAGAGTCTTTAGAGAAAACCATTACAGCATCAACAAG
rJMFF007M06-          GATTCATCATTTACATGCACAAGTAGAGTCTTTAGAGAAAACCATTACAGCATCAACAAG
                      ____________________________________________________________
consensus             GATTCATCATTTACATGCACAAGTAGAGTCTTTAGAGAAAACCATTACAGCATCAACAAG
 
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rJMFF049G02-          AAGAAAGCATAGAATTGTCTGAATGAAGTCACATAACATACACACATCTAAACCAGATCC
rJMFF007M06-          AAGAAAGCATAGAATTGTCTGAATGAAGTCACATAACATACACACATCTAAACCAGATCC
                      ____________________________________________________________
consensus             AAGAAAGCATAGAATTGTCTGAATGAAGTCACATAACATACACACATCTAAACCAGATCC
 
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rJMFF049G02-          TCCTTTGACTGGTTCTGGCCCTTTTTTATGCCTAATTGTATGTCTTCTCCGCCGGGGTTG
rJMFF007M06-          TCCTTTGACTGGTTCTGGCCCTTTTTTATGCCTAATTGTATGTCTTCTCCGCCGGGGTTG
                      ____________________________________________________________
consensus             TCCTTTGACTGGTTCTGGCCCTTTTTTATGCCTAATTGTATGTCTTCTCCGCCGGGGTTG
 
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rJMFF049G02-          CCATCAGGGAAGGATTTCTTCTCACAGTAAATGGCATACAATATCAACTGCACTGCTCCT
rJMFF007M06-          CCATCAGGGAAGGATTTCTTCTCACAGTAAATGGCATACAATATCAACTGCACTGCTCCT
                      ____________________________________________________________
consensus             CCATCAGGGAAGGATTTCTTCTCACAGTAAATGGCATACAATATCAACTGCACTGCTCCT
 
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rJMFF049G02-          AAGCCACACCCAAAACCATTTGGTATAGCAACAAAGGGGTCCTTTCCCAGCAATCCAAAG
rJMFF007M06-          AAGCCACACCCAAAACCATTTGGTATAGCAACAAAGGGGTCCTTTCCCAGCAATCCAAAG
                      ____________________________________________________________
consensus             AAGCCACACCCAAAACCATTTGGTATAGCAACAAAGGGGTCCTTTCCCAGCAATCCAAAG
 
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rJMFF049G02-          ATGAACCATGAAGTGCCACACAAGAACACAAACAGAGACAAGAAGAATGGCATGAACTCC
rJMFF007M06-          ATGAACCATGAAGTGCCACACAAGAACACAAACAGAGACAAGAAGAATGGCATGAACTCC
JMFF007M06+                                    ACACAAACAGAGACAAGAAGAATGGCATGAACTCC
                      ____________________________________________________________
consensus             ATGAACCATGAAGTGCCACACAAGAACACAAACAGAGACAAGAAGAATGGCATGAACTCC
 
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rJMFF049G02-          ACACTCTTTGTTTTAATCACTAGCCTTATGATTGACAGAGGTGAGCCATACATAATAATG
rJMFF007M06-          ACACTCTTTGTTTTAATCACTAGCCTTATGATTGACAGAGGTGAGCCATACATAATAATG
JMFF007M06+           ACACTCTTTGTTTTAATCACTAGCCTTATGATTGACAGAGGTGAGCCATACATAATAATG
                      ____________________________________________________________
consensus             ACACTCTTTGTTTTAATCACTAGCCTTATGATTGACAGAGGTGAGCCATACATAATAATG
 
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rJMFF049G02-          GAGAGGATTGTTGCCGCAACGCCACAGAAAAGCTTCCTGGTTTTTCCATGCAATGCAAGC
rJMFF007M06-          GAGAGGATTGTTGCCGCAACGCCACAGAAAAGCTTCCTGGTTTTTCCATGCAATGCAAGC
JMFF007M06+           GAGAGGATTGTTGCCGCAACGCCACAGAAAAGCTTCCTGGTTTTTCCATGCAATGCAAGC
JMFF049G02+                                   CAGAAAAGCTTCCTGGTTTTTCCATGCAATGCAAGC
                      ____________________________________________________________
consensus             GAGAGGATTGTTGCCGCAACGCCACAGAAAAGCTTCCTGGTTTTTCCATGCAATGCAAGC
 
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rJMFF049G02-          AAGGAAACCAAAGCGACAGCAGCAAATATAAGAAGGGATAAGATGAAGATTGCTCCTATC
rJMFF007M06-          AAGGAAACCAAAGCGACAGCAGCAAATATAAGAAGGGATAAGATGAAGATTGCTCCTATC
JMFF007M06+           AAGGAAACCAAAGCGACAGCAGCAAATATAAGAAGGGATAAGATGAAGATTGCTCCTATC
JMFF049G02+           AAGGAAACCAAAGCGACAGCAGCAAATATAAGAAGGGATAAGATGAAGATTGCTCCTATC
                      ____________________________________________________________
consensus             AAGGAAACCAAAGCGACAGCAGCAAATATAAGAAGGGATAAGATGAAGATTGCTCCTATC
 
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rJMFF049G02-          TTCTTCTTTGCCTTCTT                                           
rJMFF007M06-          TTCTTCTTTGCCTTCTTTGGTGCAAATATAAGGAATACCAACACATAAATGAACTCAATT
JMFF007M06+           TTCTTCTTTGCCTTCTTTGGTGCAAATATAAGGAATACCAACACATAAATGAACTCAATT
JMFF049G02+           TTCTTCTTTGCCTTCTTTGGTGCAAATATAAGGAATACCAACACATAAATGAACTCAATT
                      ____________________________________________________________
consensus             TTCTTCTTTGCCTTCTTTGGTGCAAATATAAGGAATACCAACACATAAATGAACTCAATT
 
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rJMFF007M06-          ACAGCACCAGTCCCATTGATTGTTGACACAAGCAAGTTGTTAGGTGACACAAAAGGCATA
JMFF007M06+           ACAGCACCAGTCCCATTGATTGTTGACACAAGCAAGTTGTTAGGTGACACAAAAGGCATA
JMFF049G02+           ACAGCACCAGTCCCATTGATTGTTGACACAAGCAAGTTGTTAGGTGACACAAAAGGCATA
                      ____________________________________________________________
consensus             ACAGCACCAGTCCCATTGATTGTTGACACAAGCAAGTTGTTAGGTGACACAAAAGGCATA
 
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rJMFF007M06-          CCATACCAAGCAGAAAGCAAACAGTTGAGCATGGTCATGACATAGGGCAAGCCAG     
JMFF007M06+           CCATACCAAGCAGAAAGCAAACAGTTGAGCATGGTCATGACATAGGGCAAGCCAGAAAAC
JMFF049G02+           CCATACCAAGCAGAAAGCAAACAGTTGAGCATGGTCATGACATAGGGCAAGCCAGAAAAC
                      ____________________________________________________________
consensus             CCATACCAAGCAGAAAGCAAACAGTTGAGCATGGTCATGACATAGGGCAAGCCAGAAAAC
 
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JMFF007M06+           TGTTCAGTCGATTTTTTTGCGACGATCCTCTTAAATGTAATCAATGGTGCCAGGAAGAGG
JMFF049G02+           TGTTCAGTCGATTTTTTTGCGACGATCCTCTTAAATGTAATCAATGGTGCCAGGAAGAGG
                      ____________________________________________________________
consensus             TGTTCAGTCGATTTTTTTGCGACGATCCTCTTAAATGTAATCAATGGTGCCAGGAAGAGG
 
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JMFF007M06+           AACAAAGCAGTGACATTTCCAAAGACCCCGAGCACAAAATGCAGAGTATTAACAACGTTA
JMFF049G02+           AACAAAGCAGTGACATTTCCAAAGATCCCGAGCACAAAATGCAGAGTATTAACAACGTTA
                      ____________________________________________________________
consensus             AACAAAGCAGTGACATTTCCAAAGATCCCGAGCACAAAATGCAGAGTATTAACAACGTTA
 
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JMFF007M06+           CCCATCTGGTTCAGCTCACAATACTCAATCCGGATGTAGAAAAGAAGCCAGCCAAGAAGG
JMFF049G02+           CCCATCTGGTTCAGCTCACAATACTCAATCCGGATGTAGAAAAGAAGCCAGCCAAGAAGG
                      ____________________________________________________________
consensus             CCCATCTGGTTCAGCTCACAATACTCAATCCGGATGTAGAAAAGAAGCCAGCCAAGAAGG
 
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JMFF007M06+           GATTTTGAAGAAAACCCAGAAGAAGAAAGAGTCCAAGAACTGAAAGCAGATCAGAGTCCA
JMFF049G02+           GATTTTGAAGAAAACCCAGAAGAAGAAAGAGTCCAAGAACTGAAAGCAGATCAGAGTCCA
                      ____________________________________________________________
consensus             GATTTTGAAGAAAACCCAGAAGAAGAAAGAGTCCAAGAACTGAAAGCAGATCAGAGTCCA
 
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JMFF007M06+           AGAACTGATTTT                                                
JMFF049G02+           AGAACTGATTTTGAACTAAAAAAAAATCAGAGTGGAAATTAAAATGAAATGAAATGAAAA
                      ____________________________________________________________
consensus             AGAACTGATTTTGAACTAAAAAAAAATCAGAGTGGAAATTAAAATGAAATGAAATGAAAA
 
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JMFF049G02+           GAGTGGTCTAAAGAAATAGGGTGGGTTGTGTCATAAAGAGAGCGTTTTGCAGTTGTACGT
                      ____________________________________________________________
consensus             GAGTGGTCTAAAGAAATAGGGTGGGTTGTGTCATAAAGAGAGCGTTTTGCAGTTGTACGT