Contig 004666:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013M05Sequence107004666 (4)574004666 (4)ref|XP_009595431.1|115PREDICTED: uncharacterized protein LOC104091733 [Nicotiana tomentosiformis]
JMFF048L24Sequence395004666 (4)ref|XP_009595431.1|92.0PREDICTED: uncharacterized protein LOC104091733 [Nicotiana tomentosiformis]408001228 (2)emb|CBI22027.3|4e-32unnamed protein product [Vitis vinifera]
JMFN017L21Sequence603004666 (4)ref|XP_009595431.1|114PREDICTED: uncharacterized protein LOC104091733 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF013M05-              AAAAGAAACAATTAATTCAGAAAATTAAAAAGTTACACATATATATGCCTCGATCA
JMFN017L21+                                                     ATATATATGCCTCGATCA
                      ____________________________________________________________
consensus                 AAAAGAAACAATTAATTCAGAAAATTAAAAAGTTACACATATATATGCCTCGATCA
 
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rJMFF013M05-          GCTCAAACCTTGCCGGATCCTACTCGTCTTCTTCATCAATCGAGAATATCATGGAGCTAT
JMFN017L21+           GCTCAAACCTGGCCGGATCCTACTCGTCTTCTTCATCAATCGAGAATATCATGGAGCTA-
                      ____________________________________________________________
consensus             GCTCAAACCTTGCCGGATCCTACTCGTCTTCTTCATCAATCGAGAATATCATGGAGCTAT
 
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rJMFF013M05-          TTCTCTTACGCGCGATACTGTCATTGGCGGAGGCCACGGCGGCGGTGGGGGAGCAACAGG
JMFN017L21+           TNCTCTTACGCGCGATACTGTCATTGGCGGAGGCCACGGCGGCGGTGGGGGAGCAACAGG
                      ____________________________________________________________
consensus             TTCTCTTACGCGCGATACTGTCATTGGCGGAGGCCACGGCGGCGGTGGGGGAGCAACAGG
 
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rJMFF013M05-          GGGAAGGCGACTGGGATGCGGCGGGATCGACGGCGGCGGCGGCCAAAGCTAGACAACCGT
JMFN017L21+           GGGAAGGCGACTGGGATGCGGCGGGATCGACGGCGGCGGCGGCCAAAGCTAGACAACCGT
                      ____________________________________________________________
consensus             GGGAAGGCGACTGGGATGCGGCGGGATCGACGGCGGCGGCGGCCAAAGCTAGACAACCGT
 
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rJMFF013M05-          CGCTCCAGGATCGGCGGATGGGGTACGACACGTGCGCGTACTTGAGGGAATGGTGGCAAT
JMFN017L21+           CGCTCCAGGATCGGCGGATGGGGTACGACACGTGCGCGTACTTGAGGGAATGGTGGCAAT
JMFF048L24+                                   ACGACACGTGCGCGTACTTGAGGGAATGGTGGCAAT
                      ____________________________________________________________
consensus             CGCTCCAGGATCGGCGGATGGGGTACGACACGTGCGCGTACTTGAGGGAATGGTGGCAAT
 
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rJMFF013M05-          TCCCGCGCGATTTGTGCAACGCGCAGCCGCAGTTTTTGTGGTAGGGGCGGCGTTGGATGC
JMFN017L21+           TCCCGCGCGATTTGTGCAACGCGCAGCCGCAGTTTTTGTGGTAGGGGCGGCGTTGGATGC
JMFF048L24+           TCCCGCGCGATTTGTGCAACGCGCAGCCGCAGTTTTTGTGGTAGGGGCGGCGTTGGATGC
                      ____________________________________________________________
consensus             TCCCGCGCGATTTGTGCAACGCGCAGCCGCAGTTTTTGTGGTAGGGGCGGCGTTGGATGC
 
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rJMFF013M05-          CGGTGTCGTGCCCGGAAATGCTCCCCTCGAACATACCCCGAAGAAACCCATCGCCGGCCG
JMFN017L21+           CGGTGTCGTGCCCGGAAATGCTCCCCTCGAACATACCCCGAAGAAACCCATCGCCGGCCG
JMFF048L24+           CGGTGTCGTGCCCGGAAATGCTCCCCTCGAACATACCCCGAAGAAACCCATCGCCGGCCG
                      ____________________________________________________________
consensus             CGGTGTCGTGCCCGGAAATGCTCCCCTCGAACATACCCCGAAGAAACCCATCGCCGGCCG
 
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rJMFF013M05-          CTCCGGCGTTCATTTCTGTATAGCGCCGGCCGAGCGTGCGCTTGCTTGCTCTTCAACACG
JMFN017L21+           CTCCGGCGTTCATTTCTGTATAGCGCCGGCCGAGCGTGCGCTTGCTTGCTCTTCAACACG
JMFF048L24+           CTCCGGCGTTCATTTCTGTATAGCGCCGGCCGAGCGTGCGCTTGCTTGCTCTTCAACACG
                      ____________________________________________________________
consensus             CTCCGGCGTTCATTTCTGTATAGCGCCGGCCGAGCGTGCGCTTGCTTGCTCTTCAACACG
 
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rJMFF013M05-          ATTTATATGAATATTATGAATTTTGTTAAACGGAGAAAAAAAAAAAAAA           
JMFN017L21+           ATTTATATGAATATTATGAATTTTGTTAAACGGAGAAAAAAAAAAAAAAAACAAAAGGGC
JMFF013M05+                                                 AAAAAAAAAAAAACAAAAGGGC
JMFF048L24+           ATTTATATGAATATTATGAATTTTGTTAAACGGAG-AAAAAAAAAAAAAAACAAAAGGGC
                      ____________________________________________________________
consensus             ATTTATATGAATATTATGAATTTTGTTAAACGGAGAAAAAAAAAAAAAAAACAAAAGGGC
 
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JMFN017L21+           AGAGGAGAGATGAGATGGGAGAGAAGAAAATGGAGAAATAAATAAAAACTGGAATTGAAG
JMFF013M05+           AGAGGAGAGATGAGATGGGAGAGAAGAAAATGGAGAAATAAATAAAAACTGGAATTGAAG
JMFF048L24+           AGAGGAGAGATGAGATGGGAGAGAAGAAAATGGAGAAATAAATAAAAACTGGAATTGAAG
                      ____________________________________________________________
consensus             AGAGGAGAGATGAGATGGGAGAGAAGAAAATGGAGAAATAAATAAAAACTGGAATTGAAG
 
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JMFN017L21+           CTAGGGAAGAAAGCTAAGAAATAAAAAA                                
JMFF013M05+           CTAGGGAAGAAAGCTAAGAAAT                                      
JMFF048L24+           CTAGGGAAGAAAGCTAAGAAATAAAAAAGGTTGGGTTGTTATTTTCTACTCTGATCTAAC
                      ____________________________________________________________
consensus             CTAGGGAAGAAAGCTAAGAAATAAAAAAGGTTGGGTTGTTATTTTCTACTCTGATCTAAC