Contig 004660:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF035E21+                                              GTACTTCTCAACATCTGGATATATT
                      ____________________________________________________________
consensus                                                GTACTTCTCAACATCTGGATATATT
 
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JMFF035E21+           GACTGAATTATTGCATCAAAGATGGGATCGTCTCTTAACGAACGCCGAGCACAGTGTATG
                      ____________________________________________________________
consensus             GACTGAATTATTGCATCAAAGATGGGATCGTCTCTTAACGAACGCCGAGCACAGTGTATG
 
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JMFF035E21+           CGGCAAGCAGGACACTCATTGTTCCCCAATCTCATTGACTTATCAATGCACTCCCTGCAA
                      ____________________________________________________________
consensus             CGGCAAGCAGGACACTCATTGTTCCCCAATCTCATTGACTTATCAATGCACTCCCTGCAA
 
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JMFF035E21+           AAACGGTGTTGGCACCCCATCACAACACGAGTTCTCTTGATGATACATAAAAAGCCAACA
                      ____________________________________________________________
consensus             AAACGGTGTTGGCACCCCATCACAACACGAGTTCTCTTGATGATACATAAAAAGCCAACA
 
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JMFF035E21+           ATACTTGGACAAATAGGGGCAGGCATTCTACACCTCTACGAGCTTCAAGTACTCAAAAAA
JMSF044O05+                                                ACGAGCTTCAAGTACTCAAAAAA
                      ____________________________________________________________
consensus             ATACTTGGACAAATAGGGGCAGGCATTCTACACCTCTACGAGCTTCAAGTACTCAAAAAA
 
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JMFF035E21+           AGTTGCATCACAACTCTAGCAAAAATGCAAAAATTTATAATAGTATATATTTAAATTTTA
JMSF044O05+           AGTTGCATCACAACTCTAGCAAAAATGCAAAAATTTATAATAGTATATATTTAAATTTTA
                      ____________________________________________________________
consensus             AGTTGCATCACAACTCTAGCAAAAATGCAAAAATTTATAATAGTATATATTTAAATTTTA
 
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JMFF035E21+           AAATAATAAAAGATAAATGTCTGAGTACCTAGGCATATTGGGCATTGTACATTGCCACGA
JMSF044O05+           AAATAATAAAAGATAAATGTCTGAGTACCTAGGCATATTGGGCATTGTACATTGCCACGA
JMFS009F09+                                       CTAGGCATATTGGGCATTGTACATTGCCACGA
                      ____________________________________________________________
consensus             AAATAATAAAAGATAAATGTCTGAGTACCTAGGCATATTGGGCATTGTACATTGCCACGA
 
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JMFF035E21+           ATATCTGATCGTGACACAGAAATCAACTCGTCAAAGTCTTCAGGATCAGTTCCACTCCCA
JMSF044O05+           ATATCTGATCGTGACACAGAAATCAACTCGTCAAAGTCTTCAGGATCAGTTCCACTCCCA
JMFS009F09+           ATATCTGATCGTGACACAGAAATCAACTCGTCAAAGTCTTCAGGATCAGTTCCACTCCCA
JMFF047H08+                                       CGTCAAAGTCTTCAGGATCAGTTCCACTCCCA
                      ____________________________________________________________
consensus             ATATCTGATCGTGACACAGAAATCAACTCGTCAAAGTCTTCAGGATCAGTTCCACTCCCA
 
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JMFF035E21+           TCAGAATCATCCTCAGAAGATTCTCTGATTGATTCCTGATCATGATTGGGCGCCTGCTCC
JMSF044O05+           TCAGAATCATCCTCAGAAGATTCTCTGATTGATTCCTGATCATGATTGGGCGCCTGCTCC
JMFS009F09+           TCAGAATCATCCTCAGAAGATTCTCTGATTGATTCCTGATCATGATTGGGCGCCTGCTCC
JMFF047H08+           TCAGAATCATCCTCAGAAGATTCTCTGATTGATTCCTGATCATGATTGGGCGCCTGCTCC
                      ____________________________________________________________
consensus             TCAGAATCATCCTCAGAAGATTCTCTGATTGATTCCTGATCATGATTGGGCGCCTGCTCC
 
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JMFF035E21+           TCCAGCTGCGCCCGTTCCTGCTCTCCCGTTTCTAGCTGGATTCGTTGCTGCTGTTGCTGT
JMSF044O05+           TCCAGCTGCGCCCGTTCCTGCTCTCCCGTTTCTAGCTGGATTCGTTGCTGCTGTTGCTGT
JMFS009F09+           TCCAGCTGCGCCCGTTCCTGCTCTCCCGTTTCTAGCTGGATTCGTTGCTGCTGTTGCTGT
JMFF047H08+           TCCAGCTGCGCCCGTTCCTGCTCTCCCGTTTCTAGCTGGATTCGTTGCTGCTGTTGCTGT
                      ____________________________________________________________
consensus             TCCAGCTGCGCCCGTTCCTGCTCTCCCGTTTCTAGCTGGATTCGTTGCTGCTGTTGCTGT
 
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JMFF035E21+           AGCTCGTCTTCCGGAGCTCGGTTTTGTTCCGCGCCGC                       
JMSF044O05+           AGCTCGTCTTCCGGAGCTCGGTTTTGTTCCCCGCCGCCACCACCGCGACGTCGAGATTGC
JMFS009F09+           AGCTCGTCTTCCGGAGCTCGGTTTTGTTCCCCGCCGCCACCACCGCGACGTCGAGATTGC
JMFF047H08+           AGCTCGTCTTCCGGAGCTCGGTTTTGTTCCCCGCCGCCACCACCGCGACGTCGAGATTGC
                      ____________________________________________________________
consensus             AGCTCGTCTTCCGGAGCTCGGTTTTGTTCCCCGCCGCCACCACCGCGACGTCGAGATTGC
 
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JMSF044O05+           TTCCCACGGCGCCGTTGATTCCGCCGGTGTTGGGGCTGATACAAGCTCTCATCATNGTCT
JMFS009F09+           TTCCCACGGCGCCGTTGATTCCGCCGGTGTTGGGGCTGATACAAGCTCTCATCATCGTCT
JMFF047H08+           TTCCCACGGCGCCGTTGATTCCGCCGGTGTTGGGGCTGATACAAGCTCTCATCATCGTCT
                      ____________________________________________________________
consensus             TTCCCACGGCGCCGTTGATTCCGCCGGTGTTGGGGCTGATACAAGCTCTCATCATCGTCT
 
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JMSF044O05+           TCGTCNTGATAATTCGACGAATAGCGCTTCTGCGCCGGCATTTCCCTCCTCTCTGCGCCC
JMFS009F09+           TCGTCCTGATAATTCGACGAATAGCGCTTCTGCGCCGGCATTTCCCTCCTCTCTGCGCCC
JMFF047H08+           TCGTCCTGATAATTCGACGAATAGCGCTTCTGCGCCGGCATTTCCCTCCTCTCTGCGCCC
                      ____________________________________________________________
consensus             TCGTCCTGATAATTCGACGAATAGCGCTTCTGCGCCGGCATTTCCCTCCTCTCTGCGCCC
 
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JMSF044O05+           ACGCTTTGCCTTTACAGATTATTGGCTCCTCCCTCCGTCATCTATATGCACATATCAACA
JMFS009F09+           ACGCTTTGCCTTTACAGATTATTGGCTCCTCCCTCCGTCATCTATATGCACATATCAACA
JMFF047H08+           ACGCTTTGCCTTTACAGATTATTGGCTCCTCCCTCCGTCATCTATATGCACATATCAACA
                      ____________________________________________________________
consensus             ACGCTTTGCCTTTACAGATTATTGGCTCCTCCCTCCGTCATCTATATGCACATATCAACA
 
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JMSF044O05+           TATACGCATACGTATATTTGTAATCTATATACATATAAGTGGAGATATTCAAAGAAGAAG
JMFS009F09+           TATACGCATACGTATATTTGTAATCTATATACATATAAGTGGAGATATTCAAAGAAGAAG
JMFF047H08+           TATACGCATACGTATATTTGTAATCTATATACATATAAGTGGAGATATTCAAAGAAGAAG
                      ____________________________________________________________
consensus             TATACGCATACGTATATTTGTAATCTATATACATATAAGTGGAGATATTCAAAGAAGAAG
 
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JMSF044O05+           CAAAATTGGGAGAGGGCAAANTGATAAGAATGTATATGTAAACTGTGCTCTTCGCTTTCT
JMFS009F09+           CAAAATTGGGAGAGGGCAAATTGATAAGAATGTATATGTAAACTGTGCTCTTCGCTTTCT
JMFF047H08+           CAAAATTGGGAGAGGGCAAATTGATAAGAATGTATATGTAAACTGTGCTCTTCGCTTTCT
                      ____________________________________________________________
consensus             CAAAATTGGGAGAGGGCAAATTGATAAGAATGTATATGTAAACTGTGCTCTTCGCTTTCT
 
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JMSF044O05+           ACGAAGAGAAAGAGACGAAAGGGGAGGACTAGACGC                        
JMFS009F09+           ACGAAGAGAAAGAGACGAAAGGGGAGGACTAGACGCAAGATTTTTCACTTTTTTT     
JMFF047H08+           ACGAAGAGAAAGAGACGAAAGGGGAGGACTAGACGCAAGATTTTTCACTTTTTTTTCCTC
                      ____________________________________________________________
consensus             ACGAAGAGAAAGAGACGAAAGGGGAGGACTAGACGCAAGATTTTTCACTTTTTTTTCCTC