Contig 004659:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032I15Sequence596004659 (2)ref|XP_009783849.1|2e-86PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 [Nicotia708013837 (2)ref|XP_006356906.1|2e-59PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like [So
JMFF047F13Sequence634004659 (2)ref|XP_009783849.1|2e-94PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 [Nicotia601013837 (2)ref|XP_006356906.1|2e-38PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like [So

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF047F13+ TTAGAGATTCCTCTCGAAAATCCACTGCTCTTTC
                      ____________________________________________________________
consensus TTAGAGATTCCTCTCGAAAATCCACTGCTCTTTC
 
. : . : . : . : . : . :
JMFF032I15+ TAAGTGATGCAAGATAATCCTCCCTTGAAAGGTTTTGCATTTCTTCAAGGTCCCTTG
JMFF047F13+ TTCTAAGTGATGCAAGATAATCCTCCCTTGAAAGGTTTTGCATTTCTTCAAGGTCCCTTG
                      ____________________________________________________________
consensus TTCTAAGTGATGCAAGATAATCCTCCCTTGAAAGGTTTTGCATTTCTTCAAGGTCCCTTG
 
. : . : . : . : . : . :
JMFF032I15+ TATAATCTGTTACTGGAAAATTAATGAGTGTTCCAGGACCCCAATATTTCAAAGCAGCAA
JMFF047F13+ TATAATCTGTTACTGGAAAATTAATGAGTGTTCCAGGACCCCAATATTTCAAAGCAGCAA
                      ____________________________________________________________
consensus TATAATCTGTTACTGGAAAATTAATGAGTGTTCCAGGACCCCAATATTTCAAAGCAGCAA
 
. : . : . : . : . : . :
JMFF032I15+ GATCATATGCTCTGGCAGCAGCCTCCTCATCATCATATGCACCCAAATAAACTTGTTTTC
JMFF047F13+ GATCATATGCTCTGGCAGCAGCCTCCTCATCATCATATGCACCCAAATAAACTTGTTTTC
                      ____________________________________________________________
consensus GATCATATGCTCTGGCAGCAGCCTCCTCATCATCATATGCACCCAAATAAACTTGTTTTC
 
. : . : . : . : . : . :
JMFF032I15+ CCTTCTTATTTTGATTTTGATTCCAGGTGCTTTTATCCCAAAGATGAGCTTCATAACGAC
JMFF047F13+ CCTTCTTATTTTGATTTTGATTCCAGGTGCTTTTATCCCAAAGATGAGCTTCATAACGAC
                      ____________________________________________________________
consensus CCTTCTTATTTTGATTTTGATTCCAGGTGCTTTTATCCCAAAGATGAGCTTCATAACGAC
 
. : . : . : . : . : . :
JMFF032I15+ CAGTCCATCTATGCCTAGTGACACCACGATATACAGAGCTTCGCTTGCCAGCAGTGCACG
JMFF047F13+ CAGTCCATCTATGCCTAGTGACACCACGATATACAGAGCTTCGCTTGCCAGCAGTGCACG
                      ____________________________________________________________
consensus CAGTCCATCTATGCCTAGTGACACCACGATATACAGAGCTTCGCTTGCCAGCAGTGCACG
 
. : . : . : . : . : . :
JMFF032I15+ GGGGCATTTTGCTGATGCGTTCTTTAGCTGTGCAGACCCTCTCTTTCTTTGCTTTCTTCA
JMFF047F13+ GGGGCATTTTGCTGATGCGTTCTTTAGCTGTGCAGACCCTCTCTTTCTTTGCTTTCTTCA
                      ____________________________________________________________
consensus GGGGCATTTTGCTGATGCGTTCTTTAGCTGTGCAGACCCTCTCTTTCTTTGCTTTCTTCA
 
. : . : . : . : . : . :
JMFF032I15+ GTACTCTGTACAAAGATAGCTGATCACTTCCTGTAGGCCCTGCTGTTTCTGATGTTTCTC
JMFF047F13+ GTACTCTGTACAAAGATAGCTGATCACTTCCTGTAGGCCCTGCTGTTTCTGATGTTTCTC
                      ____________________________________________________________
consensus GTACTCTGTACAAAGATAGCTGATCACTTCCTGTAGGCCCTGCTGTTTCTGATGTTTCTC
 
. : . : . : . : . : . :
JMFF032I15+ CACCACAAACATCATTGCCACTGCTTCCTTCTGGTTTAGCAGTTGGCTCAGAGGAGGAGG
JMFF047F13+ CACCACAAACATCATTGCCACTGCTTCCTTCTGGTTTAGCAGTTGGCTCAGAGGAGGAGG
                      ____________________________________________________________
consensus CACCACAAACATCATTGCCACTGCTTCCTTCTGGTTTAGCAGTTGGCTCAGAGGAGGAGG
 
. : . : . : . : . : . :
JMFF032I15+ AAGCCATAGTTGAAACCGTCACCTGTAAGGAGGGAGCTTTAGGTCGGAAATTCGTCGAGG
JMFF047F13+ AAGCCATAGTTGAAACCGTCACCTGTAAGGAGGGAGCTTTAGGTCGGAAATTCGTCGAGG
                      ____________________________________________________________
consensus AAGCCATAGTTGAAACCGTCACCTGTAAGGAGGGAGCTTTAGGTCGGAAATTCGTCGAGG
 
. : . : . : . : . : . :
JMFF032I15+ ATTGATCGGAAATTGCAGTGAAGAGCTGAAAACTGGTCTGCTTCGAGGAGGAACCAACC
JMFF047F13+ ATTGATCGGAATTTGCAGTGAAGAGCTGAAAACTGGTCTGCTTCGAGGAGGAACCAACCC
                      ____________________________________________________________
consensus ATTGATCGGAATTTGCAGTGAAGAGCTGAAAACTGGTCTGCTTCGAGGAGGAACCAACCC