| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046E11 | Sequence | 656 | 004653 (4) | ref|XP_002283273.1| | 2e-26 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Vitis vin | 556 | 023401 | ref|XP_010106514.1| | 2e-07 | ATP-dependent zinc metalloprotease FTSH 10 [Morus notabilis] gb|EXC10690.1| ATP- |
| JMFS014C06 | Sequence | 621 | 004653 (4) | emb|CDP09082.1| | 9e-64 | unnamed protein product [Coffea canephora] | |||||
| JMFS074C11 | Sequence | 627 | 004653 (4) | ref|XP_002283273.1| | 9e-30 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Vitis vin | |||||
| JMFS137A08 | Sequence | 603 | 004653 (4) | ref|XP_002283273.1| | 1e-28 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Vitis vin | |||||
This contig is upended
. : . : . : . : . : . :
JMFS014C06+ GTTGGTC
____________________________________________________________
consensus GTTGGTC
. : . : . : . : . : . :
JMFS014C06+ CAAATCTCATCAATTCTTGGTACCAACTTGTTTCAGAAGTATACATAATTGGGACAAAAT
____________________________________________________________
consensus CAAATCTCATCAATTCTTGGTACCAACTTGTTTCAGAAGTATACATAATTGGGACAAAAT
. : . : . : . : . : . :
JMFS014C06+ CATGAGGATCAACCCCTAGCGCCTTTTGAGCTTCCTCCAACTTTTCCTCAAAAGATTCAA
____________________________________________________________
consensus CATGAGGATCAACCCCTAGCGCCTTTTGAGCTTCCTCCAACTTTTCCTCAAAAGATTCAA
. : . : . : . : . : . :
JMFS014C06+ CACTTCCAATGCTAAAATAAAATTCATATTTGCTTTTGTTTTCTTGAGCAGGTGTGCTGC
____________________________________________________________
consensus CACTTCCAATGCTAAAATAAAATTCATATTTGCTTTTGTTTTCTTGAGCAGGTGTGCTGC
. : . : . : . : . : . :
JMFS014C06+ TGACAGCTACCTCTTCTACTTCCTCAAAAGCACCATCTCCCGCATTAATTCGTGGTGAGC
____________________________________________________________
consensus TGACAGCTACCTCTTCTACTTCCTCAAAAGCACCATCTCCCGCATTAATTCGTGGTGAGC
. : . : . : . : . : . :
JMFS014C06+ CTCTGACATAAACTTTTGCAGTGGTTTTGTTAGACACAACTATGTGGTCCACTAAACCTG
____________________________________________________________
consensus CTCTGACATAAACTTTTGCAGTGGTTTTGTTAGACACAACTATGTGGTCCACTAAACCTG
. : . : . : . : . : . :
JMFS014C06+ CTTCAAGCAGCTTGGTTTTGAACTCTTGGAAACTAATCTCCTGCTCTGCTCCAGAACCAT
JMFS137A08+ TGGAAACTAATCTCCTGCTCTGCTCCAGAACCAT
JMFS074C11+ TGGAAACTAATCTCCTGCTCTGCTCCAGAACCAT
JMFF046E11+ TGGAAACTAATCTCCTGCTCTGCTCCAGAACCAT
____________________________________________________________
consensus CTTCAAGCAGCTTGGTTTTGAACTCTTGGAAACTAATCTCCTGCTCTGCTCCAGAACCAT
. : . : . : . : . : . :
JMFS014C06+ TAAACGAAATTGTCATGAAAGCCAACCAAAGTGCCAACAGGGGAATGTGGAAATTCTGGA
JMFS137A08+ TAAACGAAATTGTCATGAAAGCCAACCAAAGTGCCAACAGGGGAATGTGGAAATTCTGGA
JMFS074C11+ TAAACGAAATTGTCATGAAAGCCAACCAAAGTGCCAACAGGGGAATGTGGAAATTCTGGA
JMFF046E11+ TAAACGAAATTGTCATGAAAGCCAACCAAAGTGCCAACAGGGGAATGTGGAAATTCTGNA
____________________________________________________________
consensus TAAACGAAATTGTCATGAAAGCCAACCAAAGTGCCAACAGGGGAATGTGGAAATTCTGGA
. : . : . : . : . : . :
JMFS014C06+ GAAACTTCATCAAAGTTTCCTGAAAGTTGCTATGATCACCTGAGTTCGTATCCTCTTTGG
JMFS137A08+ GAAACTTCATCAAAGTTTCCTGAAAGTTGCTATGATCACCTGAGTTCGTATCCTCTTTGG
JMFS074C11+ GAAACTTCATCAAAGTTTCCTGAAAGTTGCTATGATCACCTGAGTTCGTATCCTCTTTGG
JMFF046E11+ GAAACTTCATCAAAGTTTCCTGAAAGTTGCTATGATCACCTGAGTTCGTATCCTCTTTGG
____________________________________________________________
consensus GAAACTTCATCAAAGTTTCCTGAAAGTTGCTATGATCACCTGAGTTCGTATCCTCTTTGG
. : . : . : . : . : . :
JMFS014C06+ ACTGAGACTTCTGCCCATCCTGCTTCGGACTGTCCTTCTTCTCTTTGGGAACATATTTAT
JMFS137A08+ ACTGAGACTTCTGCCCATCCTGCTTCGGACTGTCCTTCTTCTCTTTGGGAACATATTTAT
JMFS074C11+ ACTGAGACTTCTGCCCATCCTGCTTCGGACTGTCCTTCTTCTCTTTGGGAACATATTTAT
JMFF046E11+ ACTGAGACTTCTGCCCATCCTGCTTCGGACTGTCCTTCCTCTCTTTGGGAACATATTTAT
____________________________________________________________
consensus ACTGAGACTTCTGCCCATCCTGCTTCGGACTGTCCTTCTTCTCTTTGGGAACATATTTAT
. : . : . : . : . : . :
JMFS014C06+ CATATTTTTTTTTCTTGGGAGCTTCACTGGAGAAAAATCTGCGCAATCTAGGGTTCGCGA
JMFS137A08+ CATATTTTTTTTTCTTGGGAGCTTCACTGGAGAAAAATCTGCGCAATCTAGGGTTCGCGA
JMFS074C11+ CATATTTTTTTTTCTTGGGAGCTTCACTGGAGAAAAATCTGCGCAATCTAGGGTTCGCGA
JMFF046E11+ CATATTTTTTTTTCTTGGGAGCTTCACTGGAGAAAAATCTGCGCAATCTAGGGTTCGCGA
____________________________________________________________
consensus CATATTTTTTTTTCTTGGGAGCTTCACTGGAGAAAAATCTGCGCAATCTAGGGTTCGCGA
. : . : . : . : . : . :
JMFS014C06+ AAACATGATTAAGA
JMFS137A08+ AAACATGATTAAGATCAGAGAAACCCTGCTTCGGTACAACCTCCTTACTCGTTCTGATTG
JMFS074C11+ AAACATGATTAAGATCAGAGAAACCCTGCTTCGGTACAACCTCCTTACTCGTTCTGATTG
JMFF046E11+ AAACATGATTAAGATCAGAGAAACCCTGCTTCGGTACAACCTCCTTACTCGTTCTGATTG
____________________________________________________________
consensus AAACATGATTAAGATCAGAGAAACCCTGCTTCGGTACAACCTCCTTACTCGTTCTGATTG
. : . : . : . : . : . :
JMFS137A08+ TAGCTATATACCCCCTCAAAAGCCCTAATTCTCCGGCAAGCTGATTCTTACTTGCACCAT
JMFS074C11+ TAGCTATATACCCCCTCAAAAGCCCTAATTCTCCGGCAAGCTGATTCTTACTTGCACCAT
JMFF046E11+ TAGCTATATACCCCCTCAAAAGCCCTAATTCTCCGGCAAGCTGATTCTTACTTGCACCAT
____________________________________________________________
consensus TAGCTATATACCCCCTCAAAAGCCCTAATTCTCCGGCAAGCTGATTCTTACTTGCACCAT
. : . : . : . : . : . :
JMFS137A08+ TATTTATAACAGGAGCTGCAAACATTTCCTTGCTCCAATTCGCTACCCTCCCACTATAAA
JMFS074C11+ TATTTATAACAGGAGCTGCAAACATTTCCTTGCTCCAATTCGCTACCCTCCCACTATAAA
JMFF046E11+ TATTTATAACAGGAGCTGCAAACATTTCCTTGCTCCAATTCGCTACCCTCCCACTATAAA
____________________________________________________________
consensus TATTTATAACAGGAGCTGCAAACATTTCCTTGCTCCAATTCGCTACCCTCCCACTATAAA
. : . : . : . : . : . :
JMFS137A08+ CCCCGCTAATCGCATTTCTGGAACGAGAATATCGAGACAATGAACGAGACAATCTGGAGA
JMFS074C11+ CCCCGCTAATCGCATTTCTGGAACGAGAATATCGAGACAATGAACGAGACAATCTGGAGA
JMFF046E11+ CCCCGCTAATCGCATTTCTGGAACGAGAATATCGAGACAATGAACGAGACAATCTGGAGA
____________________________________________________________
consensus CCCCGCTAATCGCATTTCTGGAACGAGAATATCGAGACAATGAACGAGACAATCTGGAGA
. : . : . : . : . : . :
JMFS137A08+ ATATCATGATTGATAGACTTGGAAGAAGAACAATCAAGGATTTTGATTTTTGATGATGAA
JMFS074C11+ ATATCATGATTGATAGACTTGGAAGAAGAACAATCAAGGATTTTGATTTTTGATGATGAA
JMFF046E11+ ATATCATGATTGATAGACTTGGAAGAAGAACAATCAAGGATTTTGATTTTTGATGATGAA
____________________________________________________________
consensus ATATCATGATTGATAGACTTGGAAGAAGAACAATCAAGGATTTTGATTTTTGATGATGAA
. : . : . : . : . : . :
JMFS137A08+ TTTTGTTTCTT
JMFS074C11+ TTTTGTTTCTTTTCTTGCGCGAAA
JMFF046E11+ TTTTGTTTCTTTTCTTGCGCGAAAGTTTTAGTTATAAAGAATAAAAAAGAAACAAAGATA
____________________________________________________________
consensus TTTTGTTTCTTTTCTTGCGCGAAAGTTTTAGTTATAAAGAATAAAAAAGAAACAAAGATA