Contig 004652:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF046E01-                     CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTCTTTTTTT
                      ____________________________________________________________
consensus                        CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTCTTTTTTT
 
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rJMFF049P06-          ATCAAAATTCCCATGCTTAATCATTCATTAATTACAGTCCAATCATGAAAATCAAGCTCA
rJMFF046E01-          ATCAAAATTCCCATGCTTAATCATTCATTAATTACAGTCCAATCATGAAAATCAAGCTCA
                      ____________________________________________________________
consensus             ATCAAAATTCCCATGCTTAATCATTCATTAATTACAGTCCAATCATGAAAATCAAGCTCA
 
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rJMFF049P06-          GAGTACATAACATCACAATTAATCAACACACATACATCAATCTTCAATTCCTTGATACAG
rJMFF046E01-          GAGTACATAACATCACAATTAATCAACACAAATACATCAATCTTCAATTCCTTGATACAG
                      ____________________________________________________________
consensus             GAGTACATAACATCACAATTAATCAACACACATACATCAATCTTCAATTCCTTGATACAG
 
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rJMFF049P06-          TACTAAGATAGTATTGGGTTTTTGTGCTTAATATCCCCCTCCATCCCTTGTTATAGCACC
rJMFF046E01-          TACTAAGATAGTATTGGGTTTTTGTGCTTAATATCCCCCTCCATCCCTTGTTATAGCACC
                      ____________________________________________________________
consensus             TACTAAGATAGTATTGGGTTTTTGTGCTTAATATCCCCCTCCATCCCTTGTTATAGCACC
 
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rJMFF049P06-          CTGGAGTTGCAAGGACGAAGATCCATCTCCTGGGTCCAGGCAGACCGGTCTTGAATGTGC
rJMFF046E01-          CTGGAGTTGCAAGGACGAAGATCCATCTCCTGGGTCCAGGCAGACCGGTCTTGAATGTGC
                      ____________________________________________________________
consensus             CTGGAGTTGCAAGGACGAAGATCCATCTCCTGGGTCCAGGCAGACCGGTCTTGAATGTGC
 
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rJMFF049P06-          AATTGCCAATAGGTCTGCGCCAGCGCTTCAGGGTCCATCCATCCTCCGTCCCCTCCTCCG
rJMFF046E01-          AATTGCCAATAGGTCTGCGCCAGCGCTTCAGGGTCCATCCATCCTCCGTCCCCTCCTCCG
                      ____________________________________________________________
consensus             AATTGCCAATAGGTCTGCGCCAGCGCTTCAGGGTCCATCCATCCTCCGTCCCCTCCTCCG
 
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rJMFF049P06-          CCCTCGCCCCTACTCTGTTGTTGCCACGACACCGATCCCATCCCACCCCTGGGTGTGCCG
rJMFF046E01-          CCCTCGCCCCTACTCTGTTGTTGCCACGACACCGATCCCATCCCACCCCTGGGTGTGCCG
                      ____________________________________________________________
consensus             CCCTCGCCCCTACTCTGTTGTTGCCACGACACCGATCCCATCCCACCCCTGGGTGTGCCG
 
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rJMFF049P06-          ACGATGCCGTCGATGACGACATGCGCCACGTGTATTCCCTGCGGCTGGAACTCCCTCGCC
rJMFF046E01-          ACGATGCCGTCGATGACGACATGCGCCACGTGTATTCCCTGCGGCTGGAACTCCCTCGCC
                      ____________________________________________________________
consensus             ACGATGCCGTCGATGACGACATGCGCCACGTGTATTCCCTGCGGCTGGAACTCCCTCGCC
 
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rJMFF049P06-          AGGCACTGCGACAGCGCTCTCAGTGCAAATTTCCCACAGCATAGTTCGGAAAAGCCAGCA
rJMFF046E01-          AGGCACTGCGACAGCGCTCTCAGTGCAAATTTCCCACAGCATAGTTCGGAAAAGCCAGCA
JMFF049P06+                               CAGTGCAAATTTCCCACAGCATAGTTCGGAAAAGCCAGCA
                      ____________________________________________________________
consensus             AGGCACTGCGACAGCGCTCTCAGTGCAAATTTCCCACAGCATAGTTCGGAAAAGCCAGCA
 
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rJMFF049P06-          ATGCCGTTGAGAGAAGCGGCGCAGCCGGTGAAGAGAATCGTCCCTCTCCCTCTTTCCACC
rJMFF046E01-          ATGCCGTTGAGAGAAGCGGCGCAGCCGGTGAAGAGAATCGTCCCTCTCCCTCTTTCCACC
JMFF049P06+           ATGCCGTTGAGAGAAGCGGCGCAGCCGGTGAAGAGAATCGTCCCTCTCCCTCTTTCCACC
JMFF046E01+                  TGAGAGAAGCGGCGCAGCCGGTGAAGAGAATGTTCCCTCTCCCTCTTTCCACC
                      ____________________________________________________________
consensus             ATGCCGTTGAGAGAAGCGGCGCAGCCGGTGAAGAGAATCGTCCCTCTCCCTCTTTCCACC
 
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rJMFF049P06-          ATGCCCGGCA                                                  
rJMFF046E01-          ATGCCCGGCACCACCTGTTGA                                       
JMFF049P06+           ATGCCCGGCACCACCTGTTGAGCGCAGAGGAAGGCGCCGACGGAGGAGACGGCGAGGGAT
JMFF046E01+           TTGCCCGGCACCACCTGTTGAGCGCAGAGGAAGGCGCCGACGGAGGAGACGGCGAGGGAT
                      ____________________________________________________________
consensus             ATGCCCGGCACCACCTGTTGAGCGCAGAGGAAGGCGCCGACGGAGGAGACGGCGAGGGAT
 
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JMFF049P06+           TTCTCGAAGCTTTGGATCCGAATATCGGTGAAGTTGGTGGCGAGCCAGGAGAGCTGGTGG
JMFF046E01+           TTCTCCGAGCTTTGGATCCGAATTTCGGTGAAGTTGGTGGCGAGCCAGGAGAGCTGGTGG
                      ____________________________________________________________
consensus             TTCTCGGAGCTTTGGATCCGAATTTCGGTGAAGTTGGTGGCGAGCCAGGAGAGCTGGTGG
 
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JMFF049P06+           TACACATTATACACCAGAACTTCCACGAATCCCAGGGACAGAACGCCCTCGAATGCTTCC
JMFF046E01+           TACACATTATACACCAGAACTTCCACGAATCCCAGGGACAGAACGCCCTCGAATGCTTCC
                      ____________________________________________________________
consensus             TACACATTATACACCAGAACTTCCACGAATCCCAGGGACAGAACGCCCTCGAATGCTTCC
 
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JMFF049P06+           AGTATGCTCCGGGACTCCGAGCAGTCGATTCCGATGGCGAAAACCTGCGCCTTTTCTTCC
JMFF046E01+           AGTATGCTCCGGGACTCCGAGCAGTCGATTCCGATGGCGAAAACCTGCGCCTTTTCTTCC
                      ____________________________________________________________
consensus             AGTATGCTCCGGGACTCCGAGCAGTCGATTCCGATGGCGAAAACCTGCGCCTTTTCTTCC
 
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JMFF049P06+           CGGGCTATCTCGTCGGCAAACCTCGACAATCTACCTAAGTCGCGGACTAAGATGGCGACG
JMFF046E01+           CGGGCTATCTCGTCGGCAAACCTCGACAATCTACCTAAGTCGCGGGCTAAGATGGCGACG
                      ____________________________________________________________
consensus             CGGGCTATCTCGTCGGCAAACCTCGACAATCTACCTAAGTCGCGGGCTAAGATGGCGACG
 
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JMFF049P06+           GTGTAGCCTTCGTGGGCGAACTTGCGGGCGATGGAGCGGCCCAGGTCGGGTCCCACGCCA
JMFF046E01+           GTGTAGCCTTCGTGGGCGAACTTGCGGGCGATGGAGCGGCCCAGGTCGGGTCCCACGCCA
                      ____________________________________________________________
consensus             GTGTAGCCTTCGTGGGCGAACTTGCGGGCGATGGAGCGGCCCAGGTCGGGTCCCACGCCA
 
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JMFF049P06+           ACAATGGCGGCGATGCCTCTCGTAGAGGTGGCGGCGGCGGCGGAGCTGCCCATGTTACGC
JMFF046E01+           ACAATGGCGGCGATGCCTCTCGTAGAGGTGGCGGCGGCGGCGGAGCTGCCCATGTTACGC
                      ____________________________________________________________
consensus             ACAATGGCGGCGATGCCTCTCGTAGAGGTGGCGGCGGCGGCGGAGCTGCCCATGTTACGC
 
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JMFF049P06+           TGCATTTTTTGTTGTCTCCGATCCGTGGCGGATTTAATTGA-GGGAGAGAACAGAGAAGA
JMFF046E01+           TGCATTTTTTGTTGTCTCCGATCCGTGGCGGATTTAATTGAGGGGTGAGAACAGAGAAGA
                      ____________________________________________________________
consensus             TGCATTTTTTGTTGTCTCCGATCCGTGGCGGATTTAATTGAGGGGTGAGAACAGAGAAGA
 
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JMFF049P06+           ACGGTGGTGAGGTCTCAGACCATGCGTAACTCTACCTTTCTTCCACC             
JMFF046E01+           ACGGTGGTGAGGTCTCAGACCATGCGTAACTCTACCTTTCTTCCACCGTCTTCTAAGTAA
                      ____________________________________________________________
consensus             ACGGTGGTGAGGTCTCAGACCATGCGTAACTCTACCTTTCTTCCACCGTCTTCTAAGTAA