| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034N01 | Sequence | 503 | 004649 (7) | ref|XP_009629270.1| | 4e-22 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | 434 | 005466 (3) | |||
| JMFF045E21 | Sequence | 613 | 004649 (7) | ref|XP_009629270.1| | 3e-48 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | 253 | 005466 (3) | |||
| JMFF050E03 | Sequence | 611 | 004649 (7) | ref|XP_009629270.1| | 1e-46 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | 572 | 023418 | ref|XP_008385335.1| | 4e-04 | PREDICTED: uncharacterized protein LOC103447901 isoform X2 [Malus domestica] |
| JMFS045H11 | Sequence | 607 | 004649 (7) | ref|XP_009629265.1| | 4e-49 | PREDICTED: uncharacterized protein LOC104119450 isoform X1 [Nicotiana tomentosi | |||||
| JMFS056H02 | Sequence | 642 | 004649 (7) | ref|XP_009629270.1| | 2e-60 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | |||||
| JMFS151F02 | Sequence | 601 | 004649 (7) | ref|XP_009629270.1| | 8e-53 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | |||||
| JMFS154H07 | Sequence | 613 | 004649 (7) | ref|XP_009629270.1| | 4e-54 | PREDICTED: uncharacterized protein LOC104119450 isoform X2 [Nicotiana tomentosi | |||||
This contig is upended
. : . : . : . : . : . :
JMFS056H02+ GGTATATCAC
____________________________________________________________
consensus GGTATATCAC
. : . : . : . : . : . :
JMFS045H11+ TTTGCTCGGCACACTGTACAAATCTGGT
JMFS056H02+ CAACGGGGCTCTGGAATGGAATCTCTTTCCATTTTGCTCGGCACACGGGACAAATCTGGT
JMFS151F02+ TTTGCTCGGCACACGGGACAAATCTGGT
JMFS154H07+ TTTGCTCGGCACACGGGACAAATCTGGT
JMFF050E03+ CGGGACAAATCTGGT
JMFF045E21+ GGACAAATCTGGT
____________________________________________________________
consensus CAACGGGGCTCTGGAATGGAATCTCTTTCCATTTTGCTCGGCACACGGGACAAATCTGGT
. : . : . : . : . : . :
JMFS045H11+ TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
JMFS056H02+ TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
JMFS151F02+ TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
JMFS154H07+ TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
JMFF050E03+ TCCCATGCTAACCATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
JMFF045E21+ TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
____________________________________________________________
consensus TCCCATGCTTAACATTCGAGGTTATACACTGGAAATGGAACGAGTGTGAACATTCTGCAG
. : . : . : . : . : . :
JMFS045H11+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
JMFS056H02+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
JMFS151F02+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
JMFS154H07+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
JMFF050E03+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
JMFF034N01+ TCGTCAAGCATATTGCACAAGTCTTCT
JMFF045E21+ TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
____________________________________________________________
consensus TGAAAATCGCATGCCCTTGGCCTGGTTTCATACTCGTCAAGCATATTGCACAAGTCTTCT
. : . : . : . : . : . :
JMFS045H11+ TTGAAGACTTTAAGCTGTGTTTGGGCTATCGGAGGCCGGAGGAGTAGGGGGTGGGGGTGG
JMFS056H02+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGCGGGTGG
JMFS151F02+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
JMFS154H07+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
JMFF050E03+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
JMFF034N01+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
JMFF045E21+ TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
____________________________________________________________
consensus TTGAAGACTTTAAGCTGTGTTTGGGCAATCGGAGGCCGGAGGAGGAGGGGGTGGGGGTGG
. : . : . : . : . : . :
JMFS045H11+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFS056H02+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFS151F02+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFS154H07+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFF050E03+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFF034N01+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
JMFF045E21+ TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
____________________________________________________________
consensus TGGGCATGTTGATCTGGGAGTCGGAGCTCCGGGCAGAGGCGGGAGAGAGCGGAAGGGCGT
. : . : . : . : . : . :
JMFS045H11+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFS056H02+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFS151F02+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFS154H07+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFF050E03+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFF034N01+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
JMFF045E21+ CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
____________________________________________________________
consensus CGGAAACTCTGCCGGCGGCAGAGGGAGCCGTCGCCGGACCTTCCTCTAGCGTTTCGGGAA
. : . : . : . : . : . :
JMFS045H11+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFS056H02+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFS151F02+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFS154H07+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFF050E03+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFF034N01+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
JMFF045E21+ CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
____________________________________________________________
consensus CGTAGAGACAGATATTCATTCCCAAAGCCAGCTTCGCTTTCCTCCATTTGCTCCCCATTT
. : . : . : . : . : . :
JMFS045H11+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFS056H02+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFS151F02+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFS154H07+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFF050E03+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFF034N01+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
JMFF045E21+ TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
____________________________________________________________
consensus TCTCAGCTCCACATACACAATCCCAGAACGCCCAAAACAAACCAAATTTCAGATCTCGAA
. : . : . : . : . : . :
JMFS045H11+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFS056H02+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFS151F02+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFS154H07+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFF050E03+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFF034N01+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
JMFF045E21+ CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
____________________________________________________________
consensus CAACATTATATTCTCAAGAACAAGGACCCATAGATCTCAGAATCTCAGAGGCTAAAACGC
. : . : . : . : . : . :
JMFS045H11+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFS056H02+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFS151F02+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFS154H07+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFF050E03+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFF034N01+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
JMFF045E21+ TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCTTCTTGATTCTTGAAAACCGCT
____________________________________________________________
consensus TGCAGGATTCCTCGTCTGGGATTTCACTAATCTCCTCCCTCTTGATTCTTGAAAACCGCT
. : . : . : . : . : . :
JMFS045H11+ GTTTGT
JMFS056H02+ GTTTGTTATCTTTGAACAGCAACACGTTACCC
JMFS151F02+ GTTTGTTATCTTTGAACAGCAACACGTTACC
JMFS154H07+ GTTTGTTATCTTTGAACAGCAACACGTTACCCAATCCAA
JMFF050E03+ GTTTGTTATCTTTGAACAGCAACACGTTACCCAATCCAATGGATTTCTTTACGTTT
JMFF034N01+ GTTTGTTATCTTTGAACAGCAACACGTTACCCAATCCAATGGATTTCTTTACGTTT
JMFF045E21+ GTTTGTTATCTTTGAACAGCAACACGTTACCCAATCCAATGGATTTCTTTACGTTTGGCC
____________________________________________________________
consensus GTTTGTTATCTTTGAACAGCAACACGTTACCCAATCCAATGGATTTCTTTACGTTTGGCC