Contig 004648:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036L15Sequence575004648 (11)583004648 (11)
JMFF045E05Sequence626004648 (11)564004648 (11)
JMFN004G21Sequence501004648 (11)
JMFN028C04Sequence373004648 (11)
JMFN031L09Sequence534004648 (11)
JMFN037H07Sequence378004648 (11)
JMFS087B05Sequence509004648 (11)
JMSF045H16Sequence643004648 (11)597004648 (11)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF045E05- ATTAACAAATCTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
JMFF036L15+ TTCGATCACTTTCCAATTTCCGGCAACACATT
rJMFF036L15- CTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
                      ____________________________________________________________
consensus ATTAACAAATCTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
 
. : . : . : . : . : . :
rJMFF045E05- AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFF036L15+ AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFN031L09+ AAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFS087B05+ AATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFN004G21+ AATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
rJMFF036L15- AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMSF045H16+ TAATAATAATAATTATTACA
                      ____________________________________________________________
consensus AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
 
. : . : . : . : . : . :
rJMFF045E05- TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFF036L15+ TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFN031L09+ TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFS087B05+ TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFN004G21+ TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
rJMFF036L15- TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMSF045H16+ TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
rJMSF045H16- ATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
                      ____________________________________________________________
consensus TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
 
. : . : . : . : . : . :
rJMFF045E05- AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFF036L15+ AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN031L09+ AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFS087B05+ AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN004G21+ AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN037H07+ ATATGATCAGATCTACCGGCAGCGATCGT
JMFN028C04+ CATATGATCAGATCGACCGACAGCAATCTT
rJMFF036L15- AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMSF045H16+ AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
rJMSF045H16- AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
                      ____________________________________________________________
consensus AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
 
. : . : . : . : . : . :
rJMFF045E05- AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFF036L15+ AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN031L09+ AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFS087B05+ AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN004G21+ AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN037H07+ AAGCATGGCAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN028C04+ TAGCATGACAGCCTCGAGTATCTGGATTGGTTGGCATGTAACAGTAACGTGCATATATCT
rJMFF036L15- AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMSF045H16+ AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
rJMSF045H16- AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFF045E05+ CACGTAACAGTGACCTGCATATATCT
                      ____________________________________________________________
consensus AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
 
. : . : . : . : . : . :
rJMFF045E05- TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFF036L15+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN031L09+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFS087B05+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN004G21+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN037H07+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN028C04+ TAGTATGACAAAC-CGGAGGCGGTGTCTGAACTCTATCGGTCAAGTTAGGCACCTGTCGT
rJMFF036L15- TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMSF045H16+ TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
rJMSF045H16- TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFF045E05+ TAGTATGACAAACGCGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
                      ____________________________________________________________
consensus TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
 
. : . : . : . : . : . :
rJMFF045E05- ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFF036L15+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN031L09+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFS087B05+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN004G21+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN037H07+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN028C04+ CCACTATCCATGAAGTGTCCGCAGGCGCCGGCGGGGGCTTCATCTTCATCATATACGAGG
rJMFF036L15- ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMSF045H16+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
rJMSF045H16- ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFF045E05+ ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
                      ____________________________________________________________
consensus ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
 
. : . : . : . : . : . :
rJMFF045E05- CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFF036L15+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN031L09+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFS087B05+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN004G21+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN037H07+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN028C04+ GGATTCGCCACCGACACGCAATATCCGGCGTTCGAGCCGTTGCTGCACGAGCACGCCGCC
rJMFF036L15- CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMSF045H16+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
rJMSF045H16- CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFF045E05+ CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
                      ____________________________________________________________
consensus CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
 
. : . : . : . : . : . :
rJMFF045E05- GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFF036L15+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN031L09+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFS087B05+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN004G21+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN037H07+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN028C04+ GAAGTGGCCTCGACGGAAAAAATGGCGCCACCGTGTAGAAGAAGCAGCGATATCACAAAC
rJMFF036L15- GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMSF045H16+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
rJMSF045H16- GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFF045E05+ GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
                      ____________________________________________________________
consensus GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
 
. : . : . : . : . : . :
rJMFF045E05- AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTG
JMFF036L15+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMFN031L09+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAA
JMFS087B05+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCA
JMFN004G21+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCT
JMFN037H07+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCC
JMFN028C04+ AGTA-AACAGAAGGCATGAAGGAGCAGCTTCTATTACTTCCAGTC
rJMFF036L15- AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMSF045H16+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
rJMSF045H16- AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMFF045E05+ AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
                      ____________________________________________________________
consensus AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
 
. : . : . : . : . : . :
JMFF036L15+ GAAT
rJMFF036L15- GAAT
JMSF045H16+ GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
rJMSF045H16- GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
JMFF045E05+ GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
                      ____________________________________________________________
consensus GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
 
. : . : . : . : . : . :
JMSF045H16+ CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
rJMSF045H16- CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
JMFF045E05+ CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
                      ____________________________________________________________
consensus CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
 
. : . : . : . : . : . :
JMSF045H16+ GAAGGGTGGTCTCC
rJMSF045H16- GAAGGGTGGTCTCC
JMFF045E05+ GAAGGGTGGTCTCCGGGCCGAGCTCAAGTGGTGGTCTTATATTTATTGACTAGATAAGGG
                      ____________________________________________________________
consensus GAAGGGTGGTCTCCGGGCCGAGCTCAAGTGGTGGTCTTATATTTATTGACTAGATAAGGG
 
. : . : . : . : . : . :
JMFF045E05+ TTCAAATTTTACTAAAATTATAAGAGTTATTGAGAAACTTTGATCAATTAATTATAGTGA
                      ____________________________________________________________
consensus TTCAAATTTTACTAAAATTATAAGAGTTATTGAGAAACTTTGATCAATTAATTATAGTGA
 
. : . : . : . : . : . :
JMFF045E05+ AAATTTCACCTAAAACTCGAGCCGAATAGAGACCAGACCTCGATCTTGTGCACATGCAGT
                      ____________________________________________________________
consensus AAATTTCACCTAAAACTCGAGCCGAATAGAGACCAGACCTCGATCTTGTGCACATGCAGT