Contig 004648:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF045E05-                    ATTAACAAATCTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
JMFF036L15+                                       TTCGATCACTTTCCAATTTCCGGCAACACATT
rJMFF036L15-                              CTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
                      ____________________________________________________________
consensus                       ATTAACAAATCTTCGTTTTTCGATCACTTTCCAATTTCCGGCAACACATT
 
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rJMFF045E05-          AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFF036L15+           AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFN031L09+               AAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFS087B05+                       AATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMFN004G21+                       AATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
rJMFF036L15-          AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
JMSF045H16+                                                   TAATAATAATAATTATTACA
                      ____________________________________________________________
consensus             AAATAAGGGGATAATTCAAAGGACAGGTAGAAAAACATCATAATAATAATAATTATTACA
 
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rJMFF045E05-          TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFF036L15+           TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFN031L09+           TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFS087B05+           TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMFN004G21+           TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
rJMFF036L15-          TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
JMSF045H16+           TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
rJMSF045H16-                           ATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
                      ____________________________________________________________
consensus             TTATTACAATAATACAAATTATTGACTATGATCAAAAGTCTTGTAACTAATTCAGTAACA
 
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rJMFF045E05-          AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFF036L15+           AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN031L09+           AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFS087B05+           AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN004G21+           AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMFN037H07+                                          ATATGATCAGATCTACCGGCAGCGATCGT
JMFN028C04+                                         CATATGATCAGATCGACCGACAGCAATCTT
rJMFF036L15-          AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
JMSF045H16+           AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
rJMSF045H16-          AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
                      ____________________________________________________________
consensus             AAGCTGTGTGCCCGGAGTTCAACTTCCGACCATATGATCAGATCTACCGGCAGCGATCGT
 
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rJMFF045E05-          AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFF036L15+           AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN031L09+           AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFS087B05+           AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN004G21+           AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN037H07+           AAGCATGGCAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFN028C04+           TAGCATGACAGCCTCGAGTATCTGGATTGGTTGGCATGTAACAGTAACGTGCATATATCT
rJMFF036L15-          AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMSF045H16+           AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
rJMSF045H16-          AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
JMFF045E05+                                             CACGTAACAGTGACCTGCATATATCT
                      ____________________________________________________________
consensus             AAGCATGACAGCCTCGACTCTGTGGATTGGCTGGCACGTAACAGTGACCTGCATATATCT
 
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rJMFF045E05-          TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFF036L15+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN031L09+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFS087B05+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN004G21+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN037H07+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFN028C04+           TAGTATGACAAAC-CGGAGGCGGTGTCTGAACTCTATCGGTCAAGTTAGGCACCTGTCGT
rJMFF036L15-          TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMSF045H16+           TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
rJMSF045H16-          TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
JMFF045E05+           TAGTATGACAAACGCGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
                      ____________________________________________________________
consensus             TAGTATGACAAAC-CGGAGGTGGTTTTTGAACTTTATCGGTCAAGTGAGGCAACTGTCGT
 
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rJMFF045E05-          ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFF036L15+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN031L09+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFS087B05+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN004G21+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN037H07+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFN028C04+           CCACTATCCATGAAGTGTCCGCAGGCGCCGGCGGGGGCTTCATCTTCATCATATACGAGG
rJMFF036L15-          ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMSF045H16+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
rJMSF045H16-          ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
JMFF045E05+           ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
                      ____________________________________________________________
consensus             ACACTATCCATGAATTGTCCGCCGGCGCCGGCGGGGGCTTCATCTTCATCTTCTACGCGG
 
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rJMFF045E05-          CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFF036L15+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN031L09+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFS087B05+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN004G21+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN037H07+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFN028C04+           GGATTCGCCACCGACACGCAATATCCGGCGTTCGAGCCGTTGCTGCACGAGCACGCCGCC
rJMFF036L15-          CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMSF045H16+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
rJMSF045H16-          CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
JMFF045E05+           CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
                      ____________________________________________________________
consensus             CGATTCGCCACCGACACGCAATCTCCGGCCTTCGTGCCGTTGCTGCACGAGGACGCCGCC
 
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rJMFF045E05-          GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFF036L15+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN031L09+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFS087B05+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN004G21+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN037H07+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFN028C04+           GAAGTGGCCTCGACGGAAAAAATGGCGCCACCGTGTAGAAGAAGCAGCGATATCACAAAC
rJMFF036L15-          GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMSF045H16+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
rJMSF045H16-          GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
JMFF045E05+           GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
                      ____________________________________________________________
consensus             GTTGTGGCCTCGACGGAAGAAGCTGCGCCGCCGTGTAGAAGAAGCAGCGATATCAGAAAC
 
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rJMFF045E05-          AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTG                         
JMFF036L15+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMFN031L09+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAA 
JMFS087B05+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCA                  
JMFN004G21+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCT                          
JMFN037H07+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCC                   
JMFN028C04+           AGTA-AACAGAAGGCATGAAGGAGCAGCTTCTATTACTTCCAGTC               
rJMFF036L15-          AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMSF045H16+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
rJMSF045H16-          AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
JMFF045E05+           AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
                      ____________________________________________________________
consensus             AGTAGAAGAGAAGGCATGAAGGAGCAGCTTCTCTGACTTCCAGTCATCGTCTTCTGGAAT
 
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JMFF036L15+           GAAT                                                        
rJMFF036L15-          GAAT                                                        
JMSF045H16+           GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
rJMSF045H16-          GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
JMFF045E05+           GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
                      ____________________________________________________________
consensus             GAATGATCAGACAGGAACCTGGGATAGTACTCATATTATACAGAGTATATTAAAGGTTTA
 
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JMSF045H16+           CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
rJMSF045H16-          CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
JMFF045E05+           CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
                      ____________________________________________________________
consensus             CAGCTGGCTGACTTTGTCTTCTTCTACTTTTAGTTCCCAGGCTCCTTTCAAGAAATGAAG
 
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JMSF045H16+           GAAGGGTGGTCTCC                                              
rJMSF045H16-          GAAGGGTGGTCTCC                                              
JMFF045E05+           GAAGGGTGGTCTCCGGGCCGAGCTCAAGTGGTGGTCTTATATTTATTGACTAGATAAGGG
                      ____________________________________________________________
consensus             GAAGGGTGGTCTCCGGGCCGAGCTCAAGTGGTGGTCTTATATTTATTGACTAGATAAGGG
 
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JMFF045E05+           TTCAAATTTTACTAAAATTATAAGAGTTATTGAGAAACTTTGATCAATTAATTATAGTGA
                      ____________________________________________________________
consensus             TTCAAATTTTACTAAAATTATAAGAGTTATTGAGAAACTTTGATCAATTAATTATAGTGA
 
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JMFF045E05+           AAATTTCACCTAAAACTCGAGCCGAATAGAGACCAGACCTCGATCTTGTGCACATGCAGT
                      ____________________________________________________________
consensus             AAATTTCACCTAAAACTCGAGCCGAATAGAGACCAGACCTCGATCTTGTGCACATGCAGT