Contig 004637:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+                                                                   AACA
                      ____________________________________________________________
consensus                                                                     AACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           ATCCAACATGTCACACCCCTTACAAATGCCAACAAATTCAGATGAACTTTGAAGGCAATC
                      ____________________________________________________________
consensus             ATCCAACATGTCACACCCCTTACAAATGCCAACAAATTCAGATGAACTTTGAAGGCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           ACAGACTTTATTCTCCACGTACAAGCATGCATACATACAGTACTTAGGCAATCCATGCAC
                      ____________________________________________________________
consensus             ACAGACTTTATTCTCCACGTACAAGCATGCATACATACAGTACTTAGGCAATCCATGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           ATATAATTAAACTATTGTTCTTAGAAAGCTATCTCGAATGGAATCTGATCGAGACTCGAC
                      ____________________________________________________________
consensus             ATATAATTAAACTATTGTTCTTAGAAAGCTATCTCGAATGGAATCTGATCGAGACTCGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           TAGAAACTAGCTAGAAAGGATTTGGTTTAATTTAGAGACTGACACTTGAGATGCCCCCAG
                      ____________________________________________________________
consensus             TAGAAACTAGCTAGAAAGGATTTGGTTTAATTTAGAGACTGACACTTGAGATGCCCCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           CTGCAGGCTTGGAGGCTTCATTGCCAACAAGCTTGAATTCTTTAAGCTCCTTTGTGTTCT
rJMFF044E23-            GCAGCCTTGGAGGTCTCATTGCCAACAACCTTGAATTCTTGAAGCTCTTTGATGTTCT
JMFF044E23+             GCAGCCTTGGAGGTCTCATTGCCAACAACCTTGAATTCTTGAAGCTCTTTGATGTTCT
                      ____________________________________________________________
consensus             CTGCAGCCTTGGAGGTCTCATTGCCAACAACCTTGAATTCTTGAAGCTCTTTGATGTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           GCGATTCATTCACCGCCACCTTTGCCTCGTACACCTTCTTCTGGCCGCCGTGGTCGGCCG
rJMFF044E23-          TCGATTCATTCACCGACACCTTTGCCTCGTACACCTTCTTATGCCCGCC---CTCCGACG
JMFF044E23+           TCGATTCATTCACCGACACCTTTGCCTCGTACACCTTCTTATGCCCGCC---CTCCGACG
                      ____________________________________________________________
consensus             TCGATTCATTCACCGACACCTTTGCCTCGTACACCTTCTTATGCCCGCC---CTCCGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           CCACCACCGTGATATCGTATATCACCTTATCAAACACCAAATTCGAATTCGCTTTCTTGT
rJMFF044E23-          CCACGATCGTGATGTTGTATATCACCTTATCAAACACCAAGTTCGCGTTCGCTTTCTTGT
JMFF044E23+           CCACGATCGTGATGTTGTATATCACCTTATCAAACACCAAGTTCGCGTTCGCTTTCTTGT
                      ____________________________________________________________
consensus             CCACGATCGTGATGTTGTATATCACCTTATCAAACACCAAGTTCGCGTTCGCTTTCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN044C06+           TTTGTTCAGCAACGGCAAAGCGAGCGAGCTCCTC                          
rJMFF044E23-          TGTACTCGGCTATGGCAAAGCGAGCGAGCTCCTCAGAGATGCTGGCCATTGTTAGAGAGG
JMFF044E23+           TGTACTCGGCTATGGCAAAGCGAGCGAGCTCCTCAGAGATGCTGGCCATTGTTAGAGAGG
                      ____________________________________________________________
consensus             TGTACTCGGCTATGGCAAAGCGAGCGAGCTCCTCAGAGATGCTGGCCATTGTTAGAGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF044E23-          ATGCGACAACTCTTAGGGAGAGTAGTGTCGGTGTGTTGTTTG                  
JMFF044E23+           ATGCGACAACTCTTAGGGAGAGTAGTGTCGGTGTGTTGTTTGTAGTACAACGTTGTTTTC
                      ____________________________________________________________
consensus             ATGCGACAACTCTTAGGGAGAGTAGTGTCGGTGTGTTGTTTGTAGTACAACGTTGTTTTC