Contig 004635:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B21Sequence542004635 (3)ref|XP_004244902.1|3e-20PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]686004108 (2)emb|CDP15549.1|6e-53unnamed protein product [Coffea canephora]
JMFF043J24Sequence629004635 (3)ref|XP_004244902.1|5e-41PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]657004108 (2)emb|CDP15549.1|4e-49unnamed protein product [Coffea canephora]
JMSF025L06Sequence683004635 (3)ref|XP_004244902.1|5e-60PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF025L06+           TCTCAGCATATTNCTTTCATAAATGCATTGTTCATTCTCATTGTCACAGGTGCAATCAAT
                      ____________________________________________________________
consensus             TCTCAGCATATTNCTTTCATAAATGCATTGTTCATTCTCATTGTCACAGGTGCAATCAAT
 
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JMSF025L06+           ATTGCATTTCACAGGATTGTAGGTGCTTGACAGCTCAGGTTGAAATTTAGGATCCTGGTG
JMFF043J24+                                          AGCTCAGGTGNAAATTTAGGATCCTGGTG
                      ____________________________________________________________
consensus             ATTGCATTTCACAGGATTGTAGGTGCTTGACAGCTCAGGTTGAAATTTAGGATCCTGGTG
 
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JMSF025L06+           ATGGCCGCATTGTTCACAGGTAGAACACGGAACATAGGTAACAGTACTTCCTGTATCCAC
JMFF011B21+                                                                  TCCAC
JMFF043J24+           ATGGCCGCATTGTTCACAGGTAGAACACGGAACATAGGTAACAGTACTTCCTGTATCCAC
                      ____________________________________________________________
consensus             ATGGCCGCATTGTTCACAGGTAGAACACGGAACATAGGTAACAGTACTTCCTGTATCCAC
 
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JMSF025L06+           TATAAGCGCAAAAATCTGCGGTGGAGTTCCGATCCAAAGCCGAGTTGTGTAATACCCGTT
JMFF011B21+           TATAAGCGCAAAAATCTGCGGTGGAGTTCCGATCCAAAGCCGAGTTGTGTAATACCCGTT
JMFF043J24+           TATAAGCGCAAAAATCTGCGGTGGAGTTCCGATCCAAAGCCGAGTTGTGTAATACCCGTT
                      ____________________________________________________________
consensus             TATAAGCGCAAAAATCTGCGGTGGAGTTCCGATCCAAAGCCGAGTTGTGTAATACCCGTT
 
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JMSF025L06+           CAGAAGAAGATCGTCGTGGAGACCCATGCGAGCATTGGGAAGGCTGTTCTGGAGGTTCCG
JMFF011B21+           CAGAAGAAGATCGTCGTGGAGACCCATGCGAGCATTGGGAAGGCTGTTCTGGAGGTTCCG
JMFF043J24+           CAGAAGAAGATCGTCGTGGAGACCCATGCGAGCATTGGGAAGGCTGTTCTGGAGGTTCCG
                      ____________________________________________________________
consensus             CAGAAGAAGATCGTCGTGGAGACCCATGCGAGCATTGGGAAGGCTGTTCTGGAGGTTCCG
 
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JMSF025L06+           ACGGGAGAGGCTCTTCGCATCAGAAGCTTGAGGAGACGAGTCCTTGGGTGGAAAGAGAGG
JMFF011B21+           ACGGGAGAGGCTCTTCGCATCAGAAGCTTGAGGAGACGAGTCCTTGGGTGGAAAGAGAGG
JMFF043J24+           ACGGGAGAGGCTCTTCGCATCAGAAGCTTGAGGAGACGAGTCCTTGGGTGGAAAGAGAGG
                      ____________________________________________________________
consensus             ACGGGAGAGGCTCTTCGCATCAGAAGCTTGAGGAGACGAGTCCTTGGGTGGAAAGAGAGG
 
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JMSF025L06+           GAGAACCATGGTGGTAGGCGTCGTCGCGATTCGCTGGTTGCCGTTGCGATTACCTCCGCC
JMFF011B21+           GAGAACCATGGTGGTAGGCGTCGTCGCGATTCGCTGGTTGCCGTTGCGATTACCTCCGCC
JMFF043J24+           GAGAACCATGGTGGTAGGCGTCGTCGCGATTCGCTGGTTGCCGTTGCGATTACCTCCGCC
                      ____________________________________________________________
consensus             GAGAACCATGGTGGTAGGCGTCGTCGCGATTCGCTGGTTGCCGTTGCGATTACCTCCGCC
 
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JMSF025L06+           ATTCTGCGGCGGCGACGGTGGGAGGAGGAGAAAGGAGTCGTCGTGATTGTTACTCGGCGA
JMFF011B21+           ATTCTGCGGCGGCGACGGTGGGAGGAGGAGAAAGGAGTCGTCGTGATTGTTACTCGGCGA
JMFF043J24+           ATTCTGCGGCGGCGACGGTGGGAGGAGGAGAAAGGAGTCGTCGTGATTGTTACTCGGCGA
                      ____________________________________________________________
consensus             ATTCTGCGGCGGCGACGGTGGGAGGAGGAGAAAGGAGTCGTCGTGATTGTTACTCGGCGA
 
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JMSF025L06+           GAACCGAAGACACCAAACGACGCCGTACCAGCTGAACAAAACAGCGAGAGAAAGGAGCAT
JMFF011B21+           GAACCGAAGACACCAAACGACGCCGTACCAGCTGAACAAAACAGCGAGAGAAAGGAGCAT
JMFF043J24+           GAACCGAAGACACCAAACGACGCCGTACCAGCTGAACAAAACAGCGAGAGAAAGGAGCAT
                      ____________________________________________________________
consensus             GAACCGAAGACACCAAACGACGCCGTACCAGCTGAACAAAACAGCGAGAGAAAGGAGCAT
 
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JMSF025L06+           AGCCCGTGCCATAATTTCTAGGGTCGGGTATGGCTCGGGCGGGCGGTCGGTCGGCGATGA
JMFF011B21+           AGCCCGTGCCATAATTTCTAGGGTCGGGTATGGCTCGGGCGGGCGGTCGGTCGGCGATGA
JMFF043J24+           AGCCCGTGCCATAATTTCTAGGGTCGGGTATGGCTCGGGCGGGCGGTCGGTCGGCGATGA
                      ____________________________________________________________
consensus             AGCCCGTGCCATAATTTCTAGGGTCGGGTATGGCTCGGGCGGGCGGTCGGTCGGCGATGA
 
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JMSF025L06+           ATCTGTGATCTGAAAGTGAGGAGATCGGTGGCCGGAAAATGGGAGAAAAAAAGGGACGAC
JMFF011B21+           ATCTGTGATCTGAAAGTGAGGAGATCGGTGGCCGGAAAATGGGAGAAAAAAAGGGACGAC
JMFF043J24+           ATCTGTGATCTGAAAGTGAGGAGATCGGTGGCCGGAAAATGGGAGAAAAAAAGGGACGAC
                      ____________________________________________________________
consensus             ATCTGTGATCTGAAAGTGAGGAGATCGGTGGCCGGAAAATGGGAGAAAAAAAGGGACGAC
 
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JMSF025L06+           TTTTATATATAGTTTCAGACAC                                      
JMFF011B21+           TTTTATATATAGTTTCAGACACAGGGGATCGGAAGCTAATACTTGATCATATAATCT   
JMFF043J24+           TTTTATATATAGTTTCAGACACAGGGGATCGGAAGCTAATACTTGATCATATAATCTAAT
                      ____________________________________________________________
consensus             TTTTATATATAGTTTCAGACACAGGGGATCGGAAGCTAATACTTGATCATATAATCTAAT