| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025E01 | Sequence | 515 | 004630 (18) | gb|AGU28444.1| | 1e-70 | ribosomal protein 1, partial [Sinapis alba] | |||||
| JMFF042I15 | Sequence | 401 | 004630 (18) | ref|XP_010912010.1| | 5e-48 | PREDICTED: 60S ribosomal protein L3-like isoform X2 [Elaeis guineensis] | 401 | 004630 (18) | ref|XP_010912010.1| | 5e-48 | PREDICTED: 60S ribosomal protein L3-like isoform X2 [Elaeis guineensis] |
| JMFF048F13 | Sequence | 393 | 004630 (18) | gb|KJB16202.1| | 5e-42 | hypothetical protein B456_002G217200 [Gossypium raimondii] | 282 | 004630 (18) | ref|XP_006349325.1| | 3e-17 | PREDICTED: 60S ribosomal protein L3-2-like isoform X1 [Solanum tuberosum] ref|X |
| JMSF009K08 | Sequence | 342 | 004630 (18) | emb|CDY26351.1| | 8e-44 | BnaA03g60270D [Brassica napus] | 767 | 004630 (18) | ref|XP_009598742.1| | 1e-165 | PREDICTED: 60S ribosomal protein L3-2 [Nicotiana tomentosiformis] |
| JMSF016I22 | Sequence | 240 | 004630 (18) | emb|CDY26351.1| | 2e-31 | BnaA03g60270D [Brassica napus] | 757 | 004630 (18) | emb|CDO97512.1| | 2e-148 | unnamed protein product [Coffea canephora] |
| JMSF022M09 | Sequence | 673 | 004630 (18) | ref|XP_010030177.1| | 6e-106 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] ref|XP_010030178.1| PRE | 759 | 004630 (18) | emb|CDO97512.1| | 4e-147 | unnamed protein product [Coffea canephora] |
| JMSF024O06 | Sequence | 671 | 004630 (18) | ref|XP_002524302.1| | 9e-142 | 60S ribosomal protein L3, putative [Ricinus communis] gb|EEF38042.1| 60S ribosom | |||||
| JMSF041L19 | Sequence | 744 | 004630 (18) | ref|XP_010030177.1| | 5e-125 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] ref|XP_010030178.1| PRE | 748 | 004630 (18) | ref|XP_010912010.1| | 6e-120 | PREDICTED: 60S ribosomal protein L3-like isoform X2 [Elaeis guineensis] |
| JMSF042J13 | Sequence | 745 | 004630 (18) | ref|XP_010030177.1| | 2e-124 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] ref|XP_010030178.1| PRE | 793 | 004630 (18) | emb|CDO97512.1| | 4e-145 | unnamed protein product [Coffea canephora] |
| JMSF043I06 | Sequence | 798 | 004630 (18) | ref|XP_010030177.1| | 1e-138 | PREDICTED: 60S ribosomal protein L3 [Eucalyptus grandis] ref|XP_010030178.1| PRE | 827 | 004630 (18) | emb|CDO97512.1| | 3e-157 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF016I22- GGCAGCAGT
JMSF041L19- AGCAGT
JMSF042J13- AGCAGT
JMSF022M09- AGCAGT
JMFF048F13- GCAGT
JMFF025E01- AGCAGT
JMSF009K08- AGCAGT
JMSF043I06- AGCAGT
____________________________________________________________
consensus GGCAGCAGT
. : . : . : . : . : . :
JMSF016I22- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMSF041L19- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMSF042J13- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMSF022M09- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMFF048F13- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMFF025E01- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMSF009K08- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
JMSF043I06- TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
____________________________________________________________
consensus TGCCTTACCCAAAACTACTCATTTTCTTTCGCATCGTTGCTCTGAGATAGGAGGAAATGT
. : . : . : . : . : . :
JMSF016I22- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMSF041L19- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMSF042J13- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMSF022M09- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMFF048F13- CCCATCGCAAGTTTGAGCATCCAAGACATGGCATCTCTGGGATTCCTTCCTAGGAAGAGA
JMFF025E01- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMSF009K08- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
JMSF043I06- CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
____________________________________________________________
consensus CCCATCGCAAGTTTGAGCATCCAAGACATGGC-TCTCTGGGATTCCTTCCTAGGAAGAGA
. : . : . : . : . : . :
JMSF016I22- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMSF041L19- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMSF042J13- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMSF022M09- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMFF048F13- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMFF025E01- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMSF009K08- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
JMSF043I06- GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
____________________________________________________________
consensus GCATCTCGCCAAAGAGGAAAAGTGAAGGCATTCCCTAAAGATGATCAGACTAAGCCATGT
. : . : . : . : . : . :
JMSF016I22- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAG
JMSF041L19- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMSF042J13- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMSF022M09- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMFF048F13- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMFF025E01- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMSF009K08- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
JMSF043I06- AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
____________________________________________________________
consensus AGGTTGACTGCTTTTGTTGGATATAAAGCTGGTATGACTCATATTGTTCGAGAGGTTGAG
. : . : . : . : . : . :
JMSF041L19- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMSF042J13- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMSF022M09- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMFF048F13- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMFF025E01- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMSF009K08- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
JMSF043I06- AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
____________________________________________________________
consensus AAGCCAGGATCAAAGCTGCACAAGAAGGAGACATGTGAAGCTGTGACAGTAATTGAAACC
. : . : . : . : . : . :
JMSF041L19- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
JMSF042J13- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
JMSF022M09- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
JMFF048F13- CCTCCCATTGTTTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
JMFF025E01- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
JMSF009K08- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTC
JMSF043I06- CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
____________________________________________________________
consensus CCTCCCATTG-TTGTTGTTGGAGTTGTTGGCTATGTCAAAACACCACGTGGGCTTCGCTG
. : . : . : . : . : . :
JMSF041L19- TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
JMSF042J13- TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
JMSF022M09- TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
JMFF048F13- TCTGAATACAGTCTGGGCACAACATCTG
JMFF025E01- TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
JMSF043I06- TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
____________________________________________________________
consensus TCTGAATACAGTCTGGGCACAACATCTGAGCGAGGAAGTGAGAAGGCGATTCTATAAAAA
. : . : . : . : . : . :
JMSF041L19- CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
JMSF042J13- CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
JMSF022M09- CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
JMFF025E01- CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
JMSF043I06- CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
____________________________________________________________
consensus CTGGTGCAAGTCCAAGAAGAAAGCTTTTTCCAAGTACTCAAAGAAGCTTGAAACTGAAGA
. : . : . : . : . : . :
JMSF041L19- AGGGAAAAAGGAAATTCAATCTGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
JMSF042J13- AGGGAAAAAGGAAATTCAATCTGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
JMSF022M09- AGGGAAAAAGGAAATTCAATCTGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
JMFF025E01- AGGGAAAAAGGAAATTCAATCTGAGTTGGAG
JMSF043I06- AGGGAAAAAGGAAATTCAATCTGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
rJMSF009K08+ TGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
rJMSF043I06+ GAGAAGATGAAGAAGTACTGCTGTATAATTTA
____________________________________________________________
consensus AGGGAAAAAGGAAATTCAATCTGAGTTGGAGAAGATGAAGAAGTACTGCTGTATAA-TTA
. : . : . : . : . : . :
JMSF041L19- GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
JMSF042J13- GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
JMSF022M09- GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
JMSF043I06- GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
rJMSF009K08+ GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
rJMSF043I06+ GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
rJMSF022M09+ TAAGCAGAAGAAGGCACACT
rJMSF024O06+ AAGGCACACT
rJMSF016I22+ CTTAAGCAGAAGAAGGCACACT
rJMSF042J13+ TCTTAAGCAGAAGAAGGCACACT
rJMSF041L19+ CACACN
____________________________________________________________
consensus GGGTCTTGGTCCACACTCAGATAAGAAAAATGAAAGGTCTTAAGCAGAAGAAGGCACACT
. : . : . : . : . : . :
JMSF041L19- TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
JMSF042J13- TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
JMSF022M09- TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGNTGATTATGCATATGGGT
JMSF043I06- TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF009K08+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF043I06+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF022M09+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF024O06+ TGATGNAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTNGATTATGCATATGGGT
rJMSF016I22+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF042J13+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
rJMSF041L19+ TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
____________________________________________________________
consensus TGATGGAGATTCAAGTCAATGGTGGAACAGTAGCTCAGAAGGTTGATTATGCATATGGGT
. : . : . : . : . : . :
JMSF041L19- TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
JMSF042J13- TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
JMSF022M09- TCTTTGAAA
JMSF043I06- TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF009K08+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF043I06+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF022M09+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF024O06+ TCTNTGAAAAGCAGGTTCCTGTGGATNCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF016I22+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF042J13+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
rJMSF041L19+ TCTTTGAAAAGCAGGTTCCTGTGGATGCTG-TTTCCAAAAAGATGAGATGATTGACATTA
____________________________________________________________
consensus TCTTTGAAAAGCAGGTTCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATTGACATTA
. : . : . : . : . : . :
JMSF041L19- TTGGGGTGACCAAAGGTAAG
JMSF042J13- TTGGGGTGACCAAAGGTAA
JMSF043I06- TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF009K08+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF043I06+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF022M09+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF024O06+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF016I22+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF042J13+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
rJMSF041L19+ TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
____________________________________________________________
consensus TTGGGGTGACCAAAGGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGTGTAACCCGTC
. : . : . : . : . : . :
JMSF043I06- TACCTCGTAAGA
rJMSF009K08+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF043I06+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF022M09+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF024O06+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF016I22+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF042J13+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
rJMSF041L19+ TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
____________________________________________________________
consensus TACCTCGTAAGACCCACCGTGGGCTCCGTAAGGTTGCTTGTATTGGGGCATGGCATCCGG
. : . : . : . : . : . :
rJMSF009K08+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF043I06+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF022M09+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF024O06+ NTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF016I22+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF042J13+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
rJMSF041L19+ CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
____________________________________________________________
consensus CTAGGGTGTCATTCACAGTTGCCCGTGCTGGTCAAAATGGTTATCATCACCGCACAGAGT
. : . : . : . : . : . :
rJMSF009K08+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF043I06+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF022M09+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF024O06+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGNTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF016I22+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF042J13+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
rJMSF041L19+ TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
____________________________________________________________
consensus TGAATAAGAAAGTGTATAAGCTGGGGAAGGCTGGTCAGGAGTCCCACCAGGCCATAACTG
. : . : . : . : . : . :
rJMSF009K08+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF043I06+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF022M09+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF024O06+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF016I22+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF042J13+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMSF041L19+ AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
rJMFF042I15+ AAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
JMFF042I15- AAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
____________________________________________________________
consensus AGTTTGACAGGACTGAGAAGGATATTACCCCAATTGGAGGGTTCCCTCACTATGGCATCG
. : . : . : . : . : . :
rJMSF009K08+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF043I06+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF022M09+ TGAAAGATGACTACATCATGATAAAGAGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF024O06+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF016I22+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF042J13+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMSF041L19+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
rJMFF042I15+ TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
JMFF042I15- TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
____________________________________________________________
consensus TGAAAGATGACTACATCATGATAAAGGGTTGTTGTGTGGGTCCAAAGAAGCGCGTTGTCA
. : . : . : . : . : . :
rJMSF009K08+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF043I06+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF022M09+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF024O06+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF016I22+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF042J13+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMSF041L19+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMFF042I15+ CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
rJMFF048F13+ TGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
JMFF042I15- CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
____________________________________________________________
consensus CCTTGAGACAGTCCTTACTGAACCAAACCTCCAGGGTTGCATTGGAGGAGATCAAGCTCA
. : . : . : . : . : . :
rJMSF009K08+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF043I06+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF022M09+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF024O06+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF016I22+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF042J13+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMSF041L19+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMFF042I15+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
rJMFF048F13+ AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
JMFF042I15- AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
____________________________________________________________
consensus AGTTCATGGACACATCCTCCAAATTTGGCCATGGCCGCTTCCAAACTACCCAGGAGAAAG
. : . : . : . : . : . :
rJMSF009K08+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTC
rJMSF043I06+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMSF022M09+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMSF024O06+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMSF016I22+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMSF042J13+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMSF041L19+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
rJMFF042I15+ CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTTTTCTTCA
rJMFF048F13+ CCAAGTTCTATGGACGACTTAATGCTTAATCATTTCTGTTTCTGAAAAACTTGTTGTTTA
JMFF042I15- CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTTTTCTTCA
____________________________________________________________
consensus CCAAGTTCTATGGACGACTTAAAGCTTAATCATTT-TGTTTCTGAAAAACTTGTTCTTCA
. : . : . : . : . : . :
rJMSF043I06+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMSF022M09+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMSF024O06+ TG
rJMSF016I22+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMSF042J13+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMSF041L19+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMFF042I15+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
rJMFF048F13+ TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGCTACTCTGTTTTCC
JMFF042I15- TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
____________________________________________________________
consensus TGTATCTTCCTTTCGGATGCTTATGCAAATTTTGAGATGTTTTCTGGCA-ACTGTTTTCC
. : . : . : . : . : . :
rJMSF043I06+ TCATGGTTTAGTTGATT
rJMSF022M09+ TC
rJMSF016I22+ TCATGGTTTAGTTGATT
rJMSF042J13+ TCATGGTTTAGTTGATT
rJMSF041L19+ TCATGGTTTAGTTGATT
rJMFF042I15+ TCATGGTTTAGTTGATTTGGCAATGATGGTTAATAAATTGGTTGAAAACGATTCGATAGG
rJMFF048F13+ TCATGGTTTAGTTGATTTGGCAATGATGGTTCTTCTACTGGTTGAAAACGATTCGATAGG
JMFF042I15- TCATGGTTTAGTTGATTTGGCAATGATGGTTAATAAATTGGTTGAAAACGATTCGATAGG
____________________________________________________________
consensus TCATGGTTTAGTTGATTTGGCAATGATGGTTAATAAATTGGTTGAAAACGATTCGATAGG