Contig 004628:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+                                                                   ACCC
JMFF042E05+                             GTTATCGTCNCCGAAGTTATCCGACGGCTCCAGCGGGTACCC
                      ____________________________________________________________
consensus                               GTTATCGTCNCCGAAGTTATCCGACGGCTCCAGCGGGTACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           AAGAGCCTGCTTCGCCTCCACCAAATAGTCCCCAATCCAAGCTTTATCATAATTATTGAG
JMFF042E05+           AAGAGCCTGCTTCGCCTCCACCAAATAGTCCCCAATCCAAGCTTTATCATAATTATTGAG
                      ____________________________________________________________
consensus             AAGAGCCTGCTTCGCCTCCACCAAATAGTCCCCAATCCAAGCTTTATCATAATTATTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           CTTCGAAGGGGGCAGGCAAGAGCTCAATAAAGGGAACGACTTTAACGACAACTGCGGGCT
JMFF042E05+           CTTCGAAGGGGGCAGGCAAGAGCTCAATAAAGGGAACGACTTTAACGACAACTGCGGGCT
                      ____________________________________________________________
consensus             CTTCGAAGGGGGCAGGCAAGAGCTCAATAAAGGGAACGACTTTAACGACAACTGCGGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           ATTAAGAAACCTTTCCGCTAGCCTCGCGTCATCTAGCGGAGGCTTGAGTATAAACCGTCT
JMFF042E05+           ATTAAGAAACCTTTCCGCTAGCCTCGCGTCATCTAGCGGAGGCTTGAGTATAAACCGTCT
                      ____________________________________________________________
consensus             ATTAAGAAACCTTTCCGCTAGCCTCGCGTCATCTAGCGGAGGCTTGAGTATAAACCGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           CGGCGGCGCCTTCTTCTTGGGGGAAGTTGCCTTTCTGCGCTGCGCGAGCTCTTTCAGGAG
JMFF042E05+           CGGCGGCGCCTTCTTCTTGGGGGAAGTTGCCTTTCTGCGCTGCGCGAGCTCTTTCAGGAG
                      ____________________________________________________________
consensus             CGGCGGCGCCTTCTTCTTGGGGGAAGTTGCCTTTCTGCGCTGCGCGAGCTCTTTCAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           CCTCTGTGGGCTGTTCTCCGGGAGTTCTTTGGGCTCCACCGCTACGGCTAAAATTCGGAA
JMFF042E05+           CCTCTGTGGGCTGTTCTCCGGGAGTTCTTTGGGCTCCACCGCTACGGCTAAAATTCGGAA
                      ____________________________________________________________
consensus             CCTCTGTGGGCTGTTCTCCGGGAGTTCTTTGGGCTCCACCGCTACGGCTAAAATTCGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           CTTTGGAGAAATGGGTGCCGGAATTCTGGAAATCTTGAGGTGGGTTTGGAGAGGGAAGGG
JMFF042E05+           CTTTGGAGAAATGGGTGCCGGAATTCTGGAAATCTTGAGGTGGGTTTGGAGAGGGAAGGG
                      ____________________________________________________________
consensus             CTTTGGAGAAATGGGTGCCGGAATTCTGGAAATCTTGAGGTGGGTTTGGAGAGGGAAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           TGATAATGAGGATGAAAAGCTGAGGTCTGATGGGTGATGGACATTCAAGTGCGGTTTGAA
JMFF042E05+           TGATAATGAGGATGAAAAGCTGAGGTCTGATGGGTGATGGACATTCAAGTGCGGTTTGAA
                      ____________________________________________________________
consensus             TGATAATGAGGATGAAAAGCTGAGGTCTGATGGGTGATGGACATTCAAGTGCGGTTTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           GCTTGAACAGAGCTCCATAGCCAGTGAAGTGTGATAGAATTGTGGATTGAGTTTCAGGTA
JMFF042E05+           GCTTGAACAGAGCTCCATAGCCAGTGAAGTGTGATAGAATTGTGGATTGAGTTTCAGGTA
                      ____________________________________________________________
consensus             GCTTGAACAGAGCTCCATAGCCAGTGAAGTGTGATAGAATTGTGGATTGAGTTTCAGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           ACAGTGGGATGAAGTGACATAATAATAGTTTTCTGGATTGGATTTGAGTTATGGAGGTTT
JMFF042E05+           ACAGTGGGATGAAGTGACATAATAATAGTTTTCTGGATTGGATTTGAGTTATGGAGGTTT
                      ____________________________________________________________
consensus             ACAGTGGGATGAAGTGACATAATAATAGTTTTCTGGATTGGATTTGAGTTATGGAGGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045J06+           TTGCAGGGCTTTGATGGACTGATAGTAGCTGGAAATTGAGGTGC                
JMFF042E05+           TTGCAGGGCTTTGATGGACTGATAGTAGCTGGAAATTGAGGTGCGGCTGAAGAGAGAAAA
                      ____________________________________________________________
consensus             TTGCAGGGCTTTGATGGACTGATAGTAGCTGGAAATTGAGGTGCGGCTGAAGAGAGAAAA