Contig 004622:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF041G18-                                                         AGGGCAAACTTAT
                      ____________________________________________________________
consensus                                                            AGGGCAAACTTAT
 
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rJMFF041G18-          TGAAATTTACAATAAAGCCAGCATCAACTAATTAGTTTGAAGATCATGTAAATCTTCCAC
                      ____________________________________________________________
consensus             TGAAATTTACAATAAAGCCAGCATCAACTAATTAGTTTGAAGATCATGTAAATCTTCCAC
 
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rJMFF041G18-          CATACATCAAATCCAGTTCAAGTACTAGAAAGATACAGATTGAAAGGTCAGCAACGAAGT
                      ____________________________________________________________
consensus             CATACATCAAATCCAGTTCAAGTACTAGAAAGATACAGATTGAAAGGTCAGCAACGAAGT
 
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rJMFF041G18-          AAATGGGAGATTAAATGGCAGCCCAGTTTTTGCAGGCCGGCTATGGAAACGCCTTAAGCA
                      ____________________________________________________________
consensus             AAATGGGAGATTAAATGGCAGCCCAGTTTTTGCAGGCCGGCTATGGAAACGCCTTAAGCA
 
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rJMFF041G18-          ACAGGTGGTCGAAGGACATGATCCTGTGAGGTGTCAACAGCAGCAGGAGGTAAGAACTGC
                      ____________________________________________________________
consensus             ACAGGTGGTCGAAGGACATGATCCTGTGAGGTGTCAACAGCAGCAGGAGGTAAGAACTGC
 
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rJMFF041G18-          CACGTGGCAACCCCAGGGTAGCTAATGACGGGAACCAATTTACTGACTTGACCTTGAGCA
                      ____________________________________________________________
consensus             CACGTGGCAACCCCAGGGTAGCTAATGACGGGAACCAATTTACTGACTTGACCTTGAGCA
 
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rJMFF041G18-          GCAAATGCAGCAGGTATTGCAGGAGGCATGAAGCCAGGTTGTGCATTCATGGTCTTCAGC
                      ____________________________________________________________
consensus             GCAAATGCAGCAGGTATTGCAGGAGGCATGAAGCCAGGTTGTGCATTCATGGTCTTCAGC
 
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rJMFF041G18-          TGTTGCTCAAGCTTCTCTTTCTCTGCCTTAAGCCTTTGCTTCTCATCCCGAAGTTCAATC
JMFN031B11+                                                             AAGTTCAATC
JMFF041G18+                                 CTGCCTTAAGCCTNTGCTTCTCATCCCGAAGTTCAATC
                      ____________________________________________________________
consensus             TGTTGCTCAAGCTTCTCTTTCTCTGCCTTAAGCCTTTGCTTCTCATCCCGAAGTTCAATC
 
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rJMFF041G18-          TTCTCAGCCTTCAACTCCTTAATCTTTTCCTGTAGATTCAAATTCGAGGCCTTCAACTTC
JMFN031B11+           TTCTCAGCCTTCAACTCCTTAATCTTTTCCTGTAGATTCAAATTCGAGGCCTTCAACTTC
JMFF041G18+           TTCTCAGCCTTCAACTCCTTAATCTTTTCCTGTAGATTCAAATTCGAGGCCTTCAACTTC
                      ____________________________________________________________
consensus             TTCTCAGCCTTCAACTCCTTAATCTTTTCCTGTAGATTCAAATTCGAGGCCTTCAACTTC
 
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rJMFF041G18-          TGAGCTTCGATACGTAGCTGTGTCACCACACGTACAGCATCAACTAGGATAGCAGATTTG
JMFN031B11+           TGAGCTTCGATACGTAGCTGTGTCACCACACGTACAGCATCAACTAGGATAGCAGATTTG
JMFF041G18+           TGAGCTTCGATACGTAGCTGTGTCACCACACGTACAGCATCAACTAGGATAGCAGATTTG
                      ____________________________________________________________
consensus             TGAGCTTCGATACGTAGCTGTGTCACCACACGTACAGCATCAACTAGGATAGCAGATTTG
 
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rJMFF041G18-          TCGGTTTTAGG                                                 
JMFN031B11+           TCGGTTTTAGGAACCTTGCCAGGCTCAAGAATAGCACTCAATTCCGTGAACCTATCATTT
JMFF041G18+           TCGGTTTTAGGAACCTTGCCAGGCTCAAGAATAGCACTCAATTCCGTGAACCCATCATTT
                      ____________________________________________________________
consensus             TCGGTTTTAGGAACCTTGCCAGGCTCAAGAATAGCACTCAATTCCGTGAACCTATCATTT
 
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JMFN031B11+           AGCCTATCCCTTCGCAACTTCTCCCCACATGCTTTGGAACTCGATGGAGCACATGATTCA
JMFF041G18+           AGCCTATCCCTTCGCAACTTCTCCCCACATGCTTTGGAACTCGATGGAGCACATGATTCA
                      ____________________________________________________________
consensus             AGCCTATCCCTTCGCAACTTCTCCCCACATGCTTTGGAACTCGATGGAGCACATGATTCA
 
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JMFN031B11+           GCTCTTGACCGTTTCTTGGAGCCAGTTTCCTTTGATCCATCGAGTTCCGCACTGAGAGAA
JMFF041G18+           GCTCTTGACCGTTTCTTGGAGCCAGTTTCCTTTGATCCATCGAGTTCCGCACTGAGAGAA
                      ____________________________________________________________
consensus             GCTCTTGACCGTTTCTTGGAGCCAGTTTCCTTTGATCCATCGAGTTCCGCACTGAGAGAA
 
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JMFN031B11+           GACGAACCATTCAAGGTCTGCGCGGACCAGCTGAACCCAGAACCCGAAACAGAAAAATTC
JMFF041G18+           GACGAACCATTCAAGGTCTGCGCGGACCAGCTGAACCCAGAACCCGAAACAGAAAAATTC
                      ____________________________________________________________
consensus             GACGAACCATTCAAGGTCTGCGCGGACCAGCTGAACCCAGAACCCGAAACAGAAAAATTC
 
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JMFN031B11+           GTATCGGCAACACTGATATCTTCGAACCCGTAATCGTAGAGCCAGTTGGTATTCTCCTGC
JMFF041G18+           GTATCGGCAACACTGATATCTTCGAACCCGTAATCGTAGAGCCAGTTGGTATTCTCCTGC
                      ____________________________________________________________
consensus             GTATCGGCAACACTGATATCTTCGAACCCGTAATCGTAGAGCCAGTTGGTATTCTCCTGC
 
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JMFN031B11+           AAAACCATTTCCGACCAGCCGCCGGTGAAAGCCAAGCACTTTCCGGCCAGAAGACAAACT
JMFF041G18+           AAAACCATTTCCGACCAGCCGCCGGTGAAAGCCAAGCACTTTCCGGCCAGAAGACAAACT
                      ____________________________________________________________
consensus             AAAACCATTTCCGACCAGCCGCCGGTGAAAGCCAAGCACTTTCCGGCCAGAAGACAAACT
 
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JMFN031B11+           CAGAACTCACAAAGCGCGTCCCGGGGATTTTAGATGAAAAGGGGAAAACGAAATCAGGGG
JMFF041G18+           CAGAACTCACAAAGCGCGTCCCGGGGATTTTAGATGAAAAGGGGAAAACGAAATCAGGGG
                      ____________________________________________________________
consensus             CAGAACTCACAAAGCGCGTCCCGGGGATTTTAGATGAAAAGGGGAAAACGAAATCAGGGG
 
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JMFN031B11+           AATGCGATGGATTGATGACGACGAT                                   
JMFF041G18+           AATGCGATGGATTGATGACGACGATGTGGAAAATTGAGGAATCTTTGTTCTTATTCATAC
                      ____________________________________________________________
consensus             AATGCGATGGATTGATGACGACGATGTGGAAAATTGAGGAATCTTTGTTCTTATTCATAC