Contig 004621:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J24Sequence569004621 (2)ref|XP_009603008.1|1e-68PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond782007758 (6)ref|XP_006347139.1|6e-91PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond
JMFF040I24Sequence606004621 (2)ref|XP_009603008.1|1e-76PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond786007758 (6)ref|XP_004232796.1|4e-90PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochond

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF040I24+ CCATTC
                      ____________________________________________________________
consensus CCATTC
 
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JMFF001J24+ TTGCATCAATTTTGATACATTCAGCCTCA
JMFF040I24+ AAATTAGATCGACAGTATACTTTTTTGTTCTTTGCATCAATTTTGATACATTCAGCCTCA
                      ____________________________________________________________
consensus AAATTAGATCGACAGTATACTTTTTTGTTCTTTGCATCAATTTTGATACATTCAGCCTCA
 
. : . : . : . : . : . :
JMFF001J24+ CAGTACTGCATATCTACATTTTTCTTTCTGATAATGTTACGAATTGGTTCAACAATGCTG
JMFF040I24+ CAGTACTGCATATCTACATTTTTCTTTCTGATAATGTTACGAATTGGTTCAACAATGCTG
                      ____________________________________________________________
consensus CAGTACTGCATATCTACATTTTTCTTTCTGATAATGTTACGAATTGGTTCAACAATGCTG
 
. : . : . : . : . : . :
JMFF001J24+ CGACCTTCAACGGTGCCACATGTTACACTTGGCAGCAAGGGAGTAAATGCAAAGTAATTA
JMFF040I24+ CGACCTTCAACGGTGCCACATGTTACACTTGGCAGCAAGGGAGTAAATGCAAAGTAATTA
                      ____________________________________________________________
consensus CGACCTTCAACGGTGCCACATGTTACACTTGGCAGCAAGGGAGTAAATGCAAAGTAATTA
 
. : . : . : . : . : . :
JMFF001J24+ CGCGGTGATATCACCTGAACATCATATGAGGGATCTTTCAGGTTCTTCAAGAAACTAGTT
JMFF040I24+ CGCGGTGATATCACCTGAACATCATATGAGGGATCTTTCAGGTTCTTCAAGAAACTAGTT
                      ____________________________________________________________
consensus CGCGGTGATATCACCTGAACATCATATGAGGGATCTTTCAGGTTCTTCAAGAAACTAGTT
 
. : . : . : . : . : . :
JMFF001J24+ CCAGCCCAACCAGTTCCAAGTACTACCACTCTCTTTTTCTGGTGATTGACCTCGGTCAAA
JMFF040I24+ CCAGCCCAACCAGTTCCAAGTACTACCACTCTCTTTTTCTGGTGATTGACCTCGGTCAAA
                      ____________________________________________________________
consensus CCAGCCCAACCAGTTCCAAGTACTACCACTCTCTTTTTCTGGTGATTGACCTCGGTCAAA
 
. : . : . : . : . : . :
JMFF001J24+ TCCCCAAGGTTATTGCTCTCATGTGGCTTTGTTGCCTCAGAGTATGCCACAAGGCTTCCA
JMFF040I24+ TCCCCAAGGTTATTGCTCTCATGTGGCTTTGTTGCCTCAGAGTATGCCACAAGGCTTCCA
                      ____________________________________________________________
consensus TCCCCAAGGTTATTGCTCTCATGTGGCTTTGTTGCCTCAGAGTATGCCACAAGGCTTCCA
 
. : . : . : . : . : . :
JMFF001J24+ CCACTGACAGTGAAAACAATTAGAAGCTTAGAAAGCGAAGGATTTTCACGGAAGGTTCGA
JMFF040I24+ CCACTGACAGTGAAAACAATTAGAAGCTTAGAAAGCGAAGGATTTTCACGGAAGGTTCGA
                      ____________________________________________________________
consensus CCACTGACAGTGAAAACAATTAGAAGCTTAGAAAGCGAAGGATTTTCACGGAAGGTTCGA
 
. : . : . : . : . : . :
JMFF001J24+ GCAAATCTCTGCATTTTTTTTCACTTCGAAAGCTGATCTCCACCACAACACAAAACGAAA
JMFF040I24+ GCAAATCTCTGCATTTTTTTTCACTTCGAAAGCTGATCTCCACCACAACACAAAACGAAA
                      ____________________________________________________________
consensus GCAAATCTCTGCATTTTTTTTCACTTCGAAAGCTGATCTCCACCACAACACAAAACGAAA
 
. : . : . : . : . : . :
JMFF001J24+ TCTCTCTCCCCAACTTCAGATCACCTCTAAGAAGAAAGTACGAAAGCGAATCAATGGCGA
JMFF040I24+ TCTCTCTCCCCAACTTCAGATCACCTCTAAGAAGAAAGTACGAAAGCGAATCAATGGCGA
                      ____________________________________________________________
consensus TCTCTCTCCCCAACTTCAGATCACCTCTAAGAAGAAAGTACGAAAGCGAATCAATGGCGA
 
. : . : . : . : . : . :
JMFF001J24+ GTCAAAACGGCTACACAGCGACAAAAAATGAGGCGTGCTTATTCTCGGTTTCTCACCTCC
JMFF040I24+ GTCAAAACGGCTACACAGCGACAAAAAATGAGGCGTGCTTATTCTCGGTTTCTCACCTCC
                      ____________________________________________________________
consensus GTCAAAACGGCTACACAGCGACAAAAAATGAGGCGTGCTTATTCTCGGTTTCTCACCTCC