Contig 004620:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS106G11+                                               TGNCAGGAATTCNCCGCTCTAGAG
                      ____________________________________________________________
consensus                                                 TGNCAGGAATTCNCCGCTCTAGAG
 
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JMFS106G11+           CAAACTGCACCTGAGCTTCGTGTGTGTCTTTTGGTGCAAACGATAACGGGAAGATGTCTC
                      ____________________________________________________________
consensus             CAAACTGCACCTGAGCTTCGTGTGTGTCTTTTGGTGCAAACGATAACGGGAAGATGTCTC
 
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JMFS106G11+           GGGACAACAAGTAGGCACCCCAACTCGCAACCCCGCAGCCGGTATCAATGGCCGTCCGGA
                      ____________________________________________________________
consensus             GGGACAACAAGTAGGCACCCCAACTCGCAACCCCGCAGCCGGTATCAATGGCCGTCCGGA
 
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JMFS106G11+           TTGAACCGTCTTTAAGGTTGATAAGGCGGCCAATATCGTCGATGTAAGCATCAGCGCCGC
                      ____________________________________________________________
consensus             TTGAACCGTCTTTAAGGTTGATAAGGCGGCCAATATCGTCGATGTAAGCATCAGCGCCGC
 
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JMFS106G11+           GAGGGAACATGGTGCCGCCGCCGGGGAAGGTGAACCGTTCACCTTTGAACCGGACCCAGT
                      ____________________________________________________________
consensus             GAGGGAACATGGTGCCGCCGCCGGGGAAGGTGAACCGTTCACCTTTGAACCGGACCCAGT
 
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JMFS106G11+           TCTGACCGGCCTTCTCGACGGTCAAGTGCTTGTGCGGCACGTTGGCGTACCAGACAGAGT
                      ____________________________________________________________
consensus             TCTGACCGGCCTTCTCGACGGTCAAGTGCTTGTGCGGCACGTTGGCGTACCAGACAGAGT
 
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JMFS106G11+           CGCGACTCTCCGGCCACCGGACGGGAATCCTGTACCCGAAGGGCGCCGGAATTCTGCACT
                      ____________________________________________________________
consensus             CGCGACTCTCCGGCCACCGGACGGGAATCCTGTACCCGAAGGGCGCCGGAATTCTGCACT
 
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JMFS106G11+           TCAACAACTCCTCCTTCGCCGGACAGTGCCGTTCTCTGTATTTCAGCATGCGCCGGTCGA
                      ____________________________________________________________
consensus             TCAACAACTCCTCCTTCGCCGGACAGTGCCGTTCTCTGTATTTCAGCATGCGCCGGTCGA
 
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JMFS106G11+           ATTTCAACGACCGCTCCGTGTCCTGGCACGGCGTGTACTCGGAAAGCTCCGCCTTGCATG
JMFF001D17+                                  TGGCACGGCGTGTACTCGGAAAGCTCCGCCTTGCATG
                      ____________________________________________________________
consensus             ATTTCAACGACCGCTCCGTGTCCTGGCACGGCGTGTACTCGGAAAGCTCCGCCTTGCATG
 
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JMFS106G11+           GCGGAAACTCCTTCGCCGGCGGCGCCTGCGCCACCGCCAC-AAGGTCCTCCGCCGCGTGG
JMFF001D17+           GCGGAAACTCCTTCGCCGGCGGCGCCTGCGCCACCGCCACAAAGGTCCTCCGCCGCGTGG
JMFF040F07+                                                    AAGGTCCTCCGCCGCGTGG
                      ____________________________________________________________
consensus             GCGGAAACTCCTTCGCCGGCGGCGCCTGCGCCACCGCCACAAAGGTCCTCCGCCGCGTGG
 
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JMFS106G11+           TGCGCGGCGAAGTCAAGGGACACGGCGGAGGACGATGACGTCAAATTAGTCGTATC    
JMFF001D17+           TGCGCGGCGAAGTCAAGGGACACGGCGGAGGACGATGACGTCAAATTAGTCGTATCCGTC
JMFF040F07+           TGCGCGGCGAAGTCAAGGGACACGGCGGAGGACGATGACGTCAAATTAGTCGTATCCGTC
                      ____________________________________________________________
consensus             TGCGCGGCGAAGTCAAGGGACACGGCGGAGGACGATGACGTCAAATTAGTCGTATCCGTC
 
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JMFF008H23+                              CGCACGGGACTGAGGGGAGTAGGGCGGCCGTCGATATCTGC
JMFF001D17+           GAATCCTTATTCAACGGCTCGCACGGGACTGAGGGGAGTAGGGCGGCCGTCGATATCTGC
JMFF040F07+           GAATCCTTATTCAACGGCTCGCACGGGACTGAGGGGAGTAGGGCGGCCGTCGATATCTGC
                      ____________________________________________________________
consensus             GAATCCTTATTCAACGGCTCGCACGGGACTGAGGGGAGTAGGGCGGCCGTCGATATCTGC
 
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JMFF008H23+           TGGCCGGAAAAGCCGCCGTGCTGCAAAATTCCGATGAGAT-AAACACAGAACAGAGTACC
JMFF001D17+           TGGCCGGAAAAGCCGCCGTGCTGCAAAATTCCGATGAGATAAAACACAGAACAGAGTACC
JMFF040F07+           TGGCCGGAAAAGCCGCCGTGCTGCAAAATTCCGATGAGATAAAACACAGAACAGAGTACC
                      ____________________________________________________________
consensus             TGGCCGGAAAAGCCGCCGTGCTGCAAAATTCCGATGAGATAAAACACAGAACAGAGTACC
 
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JMFF008H23+           GTNGTCGCCGCCACGTAGTAAAGANTAGT                               
JMFF001D17+           GTCGTCGCCGCCACGTAGTAAAGATTAGTCCTTTTTGTCCTCGCGCTAAGAAATTGCGGC
JMFF040F07+           GTCGTCGCCGCCACGTAGTAAAGATTAGTCCTTTTTGTCCTCGCGCTAAGAAATTGCGGC
                      ____________________________________________________________
consensus             GTCGTCGCCGCCACGTAGTAAAGATTAGTCCTTTTTGTCCTCGCGCTAAGAAATTGCGGC
 
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JMFF001D17+           AACCTAGCCGAAATCGCCATTGCCGCCAAACCAGAGAGAAGAAGAAAGAAATTGAAATCG
JMFF040F07+           AACCTAGCCGAAATCGCCATTGCCGCCAAACCAGAGAGAAGAAGAAAGAAATTGAAATCG
                      ____________________________________________________________
consensus             AACCTAGCCGAAATCGCCATTGCCGCCAAACCAGAGAGAAGAAGAAAGAAATTGAAATCG
 
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JMFF001D17+           TTGGCGTTTTTTTGTTTCTTTTGCCAATCTTATAAGATCATTGTTTCCAAATCC      
JMFF040F07+           TTGGCGTTTTTTTGTTTCTTTTGCCAATCTTATAAGATCATTGTTTCCAAATCCCCATAT
                      ____________________________________________________________
consensus             TTGGCGTTTTTTTGTTTCTTTTGCCAATCTTATAAGATCATTGTTTCCAAATCCCCATAT