Contig 004619:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F06Sequence265004619 (3)ref|XP_009626852.1|7e-13PREDICTED: F-box/kelch-repeat protein SKIP11-like [Nicotiana tomentosiformis] r699003416 (5)emb|CDP00309.1|8e-51unnamed protein product [Coffea canephora]
JMFF040C03Sequence523004619 (3)ref|XP_009778034.1|3e-05PREDICTED: F-box/kelch-repeat protein SKIP11-like [Nicotiana sylvestris] ref|XP710003416 (5)ref|XP_010091219.1|1e-34F-box/kelch-repeat protein SKIP11 [Morus notabilis] gb|EXB43474.1| F-box/kelch-r
JMSF004M07Sequence210004619 (3)510018113gb|ABP88220.1|3e-29transcription factor bZIP42, partial [Glycine max]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF001F06+ TTAGAGCGGTATCAACTCTGCCACTATCGTCAGACTGTTTCGGGCATTT
                      ____________________________________________________________
consensus TTAGAGCGGTATCAACTCTGCCACTATCGTCAGACTGTTTCGGGCATTT
 
. : . : . : . : . : . :
JMFF001F06+ CCTAAGAACGAGTTCATCCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
JMFF040C03+ CCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
                      ____________________________________________________________
consensus CCTAAGAACGAGTTCATCCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
 
. : . : . : . : . : . :
JMFF001F06+ CCGGAAACTCATGCAAGCCCAGCTGCGCTCTCTGTGATAGTCCCTTGACACCAAACACGA
JMFF040C03+ CCGGAAACTCATGCAAGCCCAGCTGCGCTATCTGTGATAGTCCCTTGACACCAAACACGA
                      ____________________________________________________________
consensus CCGGAAACTCATGCAAGCCCAGCTGCGCTCTCTGTGATAGTCCCTTGACACCAAACACGA
 
. : . : . : . : . : . :
JMFF001F06+ TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
JMFF040C03+ TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
                      ____________________________________________________________
consensus TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
 
. : . : . : . : . : . :
JMFF001F06+ AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCA
JMFF040C03+ AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCAAACAATGAAATGAATTAGGAGAAG
                      ____________________________________________________________
consensus AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCAAACAATGAAATGAATTAGGAGAAG
 
. : . : . : . : . : . :
JMSF004M07+ AATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
JMFF040C03+ AGAAGACGAACAGTTGATTGGAATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
                      ____________________________________________________________
consensus AGAAGACGAACAGTTGATTGGAATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
 
. : . : . : . : . : . :
JMSF004M07+ TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
JMFF040C03+ TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
                      ____________________________________________________________
consensus TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
 
. : . : . : . : . : . :
JMSF004M07+ CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
JMFF040C03+ CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
                      ____________________________________________________________
consensus CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
 
. : . : . : . : . : . :
JMSF004M07+ GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACT
JMFF040C03+ GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACTGGTTTTCTCC
                      ____________________________________________________________
consensus GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACTGGTTTTCTCC
 
. : . : . : . : . : . :
JMFF040C03+ TCTCGTATTCTGAGTATTTCAATCTCCAAAGGGAAAAGGAAAGAAAAAGAGAAATACGGT
                      ____________________________________________________________
consensus TCTCGTATTCTGAGTATTTCAATCTCCAAAGGGAAAAGGAAAGAAAAAGAGAAATACGGT