| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001F06 | Sequence | 265 | 004619 (3) | ref|XP_009626852.1| | 7e-13 | PREDICTED: F-box/kelch-repeat protein SKIP11-like [Nicotiana tomentosiformis] r | 699 | 003416 (5) | emb|CDP00309.1| | 8e-51 | unnamed protein product [Coffea canephora] |
| JMFF040C03 | Sequence | 523 | 004619 (3) | ref|XP_009778034.1| | 3e-05 | PREDICTED: F-box/kelch-repeat protein SKIP11-like [Nicotiana sylvestris] ref|XP | 710 | 003416 (5) | ref|XP_010091219.1| | 1e-34 | F-box/kelch-repeat protein SKIP11 [Morus notabilis] gb|EXB43474.1| F-box/kelch-r |
| JMSF004M07 | Sequence | 210 | 004619 (3) | 510 | 018113 | gb|ABP88220.1| | 3e-29 | transcription factor bZIP42, partial [Glycine max] | |||
This contig is upended
. : . : . : . : . : . :
JMFF001F06+ TTAGAGCGGTATCAACTCTGCCACTATCGTCAGACTGTTTCGGGCATTT
____________________________________________________________
consensus TTAGAGCGGTATCAACTCTGCCACTATCGTCAGACTGTTTCGGGCATTT
. : . : . : . : . : . :
JMFF001F06+ CCTAAGAACGAGTTCATCCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
JMFF040C03+ CCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
____________________________________________________________
consensus CCTAAGAACGAGTTCATCCTCTTCATCATCTTCCATTGGCCTTTTGCCAGTCCCATCAAG
. : . : . : . : . : . :
JMFF001F06+ CCGGAAACTCATGCAAGCCCAGCTGCGCTCTCTGTGATAGTCCCTTGACACCAAACACGA
JMFF040C03+ CCGGAAACTCATGCAAGCCCAGCTGCGCTATCTGTGATAGTCCCTTGACACCAAACACGA
____________________________________________________________
consensus CCGGAAACTCATGCAAGCCCAGCTGCGCTCTCTGTGATAGTCCCTTGACACCAAACACGA
. : . : . : . : . : . :
JMFF001F06+ TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
JMFF040C03+ TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
____________________________________________________________
consensus TCGGTCTTCCAGCATGTCGTCAGGATCAACCACAAGGAAGCCGCAGCTTTTCGCCTTACT
. : . : . : . : . : . :
JMFF001F06+ AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCA
JMFF040C03+ AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCAAACAATGAAATGAATTAGGAGAAG
____________________________________________________________
consensus AAACACTCACTCTACAGCCTCTCTGCTTACCAGTCAAACAATGAAATGAATTAGGAGAAG
. : . : . : . : . : . :
JMSF004M07+ AATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
JMFF040C03+ AGAAGACGAACAGTTGATTGGAATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
____________________________________________________________
consensus AGAAGACGAACAGTTGATTGGAATTGGGCGGTGCGCAAGAACAGTGCAGATGTATATTCT
. : . : . : . : . : . :
JMSF004M07+ TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
JMFF040C03+ TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
____________________________________________________________
consensus TTTTTATCTATGCATAGTATAAACTATTATATGGGAGTGGAGCTTCGTTCTGGGGTTTAA
. : . : . : . : . : . :
JMSF004M07+ CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
JMFF040C03+ CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
____________________________________________________________
consensus CAAACTCAGGGATTTCTATCTGCAAATCGGAATAGGAATAGGCTATGGCCTCCGAGTGAG
. : . : . : . : . : . :
JMSF004M07+ GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACT
JMFF040C03+ GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACTGGTTTTCTCC
____________________________________________________________
consensus GCATAATCTATGGAGGACCCCCTTCTTTATCTCTCTCAATTTTGCTAACTGGTTTTCTCC
. : . : . : . : . : . :
JMFF040C03+ TCTCGTATTCTGAGTATTTCAATCTCCAAAGGGAAAAGGAAAGAAAAAGAGAAATACGGT
____________________________________________________________
consensus TCTCGTATTCTGAGTATTTCAATCTCCAAAGGGAAAAGGAAAGAAAAAGAGAAATACGGT