Contig 004615:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039L02Sequence401004615 (2)ref|XP_006345439.1|3e-27PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Solanum tubero724007161 (6)emb|CDP04646.1|9e-73unnamed protein product [Coffea canephora]
JMSF001I14Sequence432004615 (2)ref|XP_006345439.1|5e-46PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Solanum tubero752007161 (6)emb|CDP04646.1|3e-72unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF001I14+ AGCACAATAGGGTGTTGCTCAGGCCCATATGCCAAGAACCTGTCCAAATTTCCCTCCT
                      ____________________________________________________________
consensus AGCACAATAGGGTGTTGCTCAGGCCCATATGCCAAGAACCTGTCCAAATTTCCCTCCT
 
. : . : . : . : . : . :
JMSF001I14+ GATACACAATTGTTTCTGCAGCAAGCATTTCGGTATAGAGCCATGCATGTTTCGAGATGA
                      ____________________________________________________________
consensus GATACACAATTGTTTCTGCAGCAAGCATTTCGGTATAGAGCCATGCATGTTTCGAGATGA
 
. : . : . : . : . : . :
JMSF001I14+ GCCGGGCCATAGTTCTGTAGTGATTATCTGTCCACTCCATCATCGGAGCAACACTAAACA
JMFF039L02+ GTGATTATCTGTCCACTCCATCATCGGAGCAACACTAAACA
                      ____________________________________________________________
consensus GCCGGGCCATAGTTCTGTAGTGATTATCTGTCCACTCCATCATCGGAGCAACACTAAACA
 
. : . : . : . : . : . :
JMSF001I14+ AAGGAGGAAGATATCGCTCTGCACCCATTACAGATTCTGTATGCAGTTCCTTCTTTTGAT
JMFF039L02+ AAGGAGGAAGATATCGCTCTGCACCCATTACAGATTCTGTATGCAGTTCCTTCTTTTGAT
                      ____________________________________________________________
consensus AAGGAGGAAGATATCGCTCTGCACCCATTACAGATTCTGTATGCAGTTCCTTCTTTTGAT
 
. : . : . : . : . : . :
JMSF001I14+ GGTAAGCGCGCAATTTCTTTGACTTTGTTGAATTTCCATAAAATAAATTCGATGAGAAT
JMFF039L02+ GGTAAGCGCGCAATTTCTTTGACTTTGTTGAATTTCCATAAAANAAATTCGATGAGAATN
                      ____________________________________________________________
consensus GGTAAGCGCGCAATTTCTTTGACTTTGTTGAATTTCCATAAAATAAATTCGATGAGAATN
 
. : . : . : . : . : . :
JMFF039L02+ TGCCATAGTTNTTTAGGATAACAGAATGAAAAGGAGTTAAGGAAGCAAACAAACAAAGCC
                      ____________________________________________________________
consensus TGCCATAGTTNTTTAGGATAACAGAATGAAAAGGAGTTAAGGAAGCAAACAAACAAAGCC
 
. : . : . : . : . : . :
JMFF039L02+ CGGCAGATTTCATCATCCCTCAAGATGCAGTGTAGTCTGCTCTTTGGTGTACATGGACGA
                      ____________________________________________________________
consensus CGGCAGATTTCATCATCCCTCAAGATGCAGTGTAGTCTGCTCTTTGGTGTACATGGACGA
 
. : . : . : . : . : . :
JMFF039L02+ CAAAGAAGACGATGATGTTCGCCTCCGCCGCCTCCCCCGGCGGTTTTCTTAGAGCTTTCG
                      ____________________________________________________________
consensus CAAAGAAGACGATGATGTTCGCCTCCGCCGCCTCCCCCGGCGGTTTTCTTAGAGCTTTCG
 
. : . : . : . : . : . :
JMFF039L02+ AACACCGGATCGAGCAGTGAGGGAGGCGGGCTGCTTTTCTGGATGCCCGTTAAATATAAC
                      ____________________________________________________________
consensus AACACCGGATCGAGCAGTGAGGGAGGCGGGCTGCTTTTCTGGATGCCCGTTAAATATAAC