Contig 004610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C23Sequence526004610 (10)ref|XP_006350705.1|6e-17PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]733004113 (11)ref|XP_009780944.1|3e-61PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF009N16Sequence482004610 (10)ref|XP_006350705.1|6e-18PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]704004113 (11)ref|XP_009780944.1|3e-53PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF018M05Sequence510004610 (10)ref|XP_006350705.1|8e-18PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]812004113 (11)ref|XP_009780944.1|2e-60PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF019P22Sequence469004610 (10)ref|XP_006350705.1|6e-18PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]718004113 (11)ref|XP_009780944.1|3e-60PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF029E06Sequence554004610 (10)ref|XP_009594104.1|1e-33PREDICTED: protein IQ-DOMAIN 14 [Nicotiana tomentosiformis]621004113 (11)ref|XP_009780944.1|5e-51PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF038F18Sequence538004610 (10)ref|XP_006350705.1|6e-17PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]729004113 (11)ref|XP_009780944.1|6e-60PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF041K04Sequence621004610 (10)ref|XP_006350705.1|1e-19PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]604004113 (11)ref|XP_009780944.1|1e-41PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMFF044F07Sequence637004610 (10)ref|XP_004240998.1|3e-20PREDICTED: protein IQ-DOMAIN 14-like [Solanum lycopersicum]635004113 (11)ref|XP_009780944.1|3e-42PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMSF031P24Sequence718004610 (10)ref|XP_006350705.1|7e-18PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]639004113 (11)ref|XP_009780944.1|2e-60PREDICTED: protein IQ-DOMAIN 14-like [Nicotiana sylvestris]
JMSF052J15Sequence719004610 (10)ref|XP_006350705.1|1e-22PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]854019464emb|CDP10875.1|8e-66unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF029E06+                                                     AATTTGAGTCTGTACCCT
                      ____________________________________________________________
consensus                                                       AATTTGAGTCTGTACCCT
 
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JMFF029E06+           AACTAAAAGCTGCAACTGTTTCATGGCATTGGCTGTTTGCCTCTTGACGCTATTGCTTTT
                      ____________________________________________________________
consensus             AACTAAAAGCTGCAACTGTTTCATGGCATTGGCTGTTTGCCTCTTGACGCTATTGCTTTT
 
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JMFF029E06+           AACCACTGCTTGAAGCCTTAGTAAACCCCTCAAAGATCTGAAATTCTTCCTCGCCATATA
                      ____________________________________________________________
consensus             AACCACTGCTTGAAGCCTTAGTAAACCCCTCAAAGATCTGAAATTCTTCCTCGCCATATA
 
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JMFF029E06+           ACCCCGAAAGATTGCCTGGATCCTAGTGGCTGAGAAATGAAGCACTTGTAAAGTCGGTTC
                      ____________________________________________________________
consensus             ACCCCGAAAGATTGCCTGGATCCTAGTGGCTGAGAAATGAAGCACTTGTAAAGTCGGTTC
 
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JMFF029E06+           TGGTCTATGAGTATAGCTGGTTTCTTTGCGGTTCTGGTTCACCTTAGAAGAAGCAACTTT
                      ____________________________________________________________
consensus             TGGTCTATGAGTATAGCTGGTTTCTTTGCGGTTCTGGTTCACCTTAGAAGAAGCAACTTT
 
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JMFF029E06+           GGGAGAGGTGACCCTCGGAGGACTAACCCTTGGAGATGTTGCTCTTGGAGATATTGCCCT
JMSF052J15+                                                         GGAGATATTGCCC-
                      ____________________________________________________________
consensus             GGGAGAGGTGACCCTCGGAGGACTAACCCTTGGAGATGTTGCTCTTGGAGATATTGCCCT
 
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JMFF029E06+           TGGAGAAGCAGCCCGAGGAGATATTGCTCTTGGAGAAGCAGCCCGAGGAGATATTGCCCT
JMSF031P24+           TGGAGAAGCAGCCCGAGGAGATATTGCTC-TGGAGAAGCAGNCCGAGGAGATATTGCCCT
JMSF052J15+           TGGAGAAGCAGCCCGAGGAGATATNGCTCTTGGAGAAGCAGCCCGAGGAGATATTG-CCT
                      ____________________________________________________________
consensus             TGGAGAAGCAGCCCGAGGAGATATTGCTCTTGGAGAAGCAGCCCGAGGAGATATTGCCCT
 
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JMFF029E06+           TGGAGAAGCAGCCCGAGGAGATATTGCCCTTGGAGAAACAGCCCGAGGAGATATTGCCCT
JMFF041K04+                                            AGAAACAGCCCGAGGAGATATTGCCCT
JMFF044F07+              AGAAGCAGCCCGAGGAGATATTGCCC-TGGAGAAACAGCCCGAGGAGATATTGCCCT
JMSF031P24+           NGGAGAAGCAGCCCGAGGAGATATTGCCCTTGGAGAAACAGCCCGAGGAGATATTGCCCT
JMSF052J15+           TGGAGAAGCAGCCCGAGGAGATATTGCCCTTGGAGAAACAGCCCGAGGAGATATTGCCCT
                      ____________________________________________________________
consensus             TGGAGAAGCAGCCCGAGGAGATATTGCCCTTGGAGAAACAGCCCGAGGAGATATTGCCCT
 
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JMFF029E06+           TGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
JMFF041K04+           TGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
JMFF044F07+           TGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
JMFF003C23+                                                                      T
JMSF031P24+           NGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
JMSF052J15+           NGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
                      ____________________________________________________________
consensus             TGGAGATATTGTCCTTGGAGAAGCAGCTCGTGGGGAGCTAACTTTTAGAGGACCACCCCT
 
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JMFF029E06+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAG    
JMFF009N16+                    AACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF041K04+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF044F07+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF003C23+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMSF031P24+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF019P22+                         TAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF018M05+                       CCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMSF052J15+           CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
JMFF038F18+             GGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
                      ____________________________________________________________
consensus             CGGGGATGCAACCCTAGGAGGAGAGTACCTTGGCGAAGCAGCTCTACAGGAAGAAGCCCG
 
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JMFF009N16+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF041K04+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF044F07+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF003C23+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMSF031P24+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF019P22+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF018M05+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMSF052J15+           GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
JMFF038F18+           GGAAGGAGAAAGCCNTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
                      ____________________________________________________________
consensus             GGAAGGAGAAAGCCTTGGAGATGTTGGCCTTGCAAAAGCAGCATCTTTTTGTTGCTCGTA
 
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JMFF009N16+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF041K04+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF044F07+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF003C23+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMSF031P24+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF019P22+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF018M05+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
JMSF052J15+           ATAAAGAGGAACAAGTAGGTTCTGTTCATNTGCCTCCTCCAGAATTTTCTCGATACTACT
JMFF038F18+           ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
                      ____________________________________________________________
consensus             ATAAAGAGGAACAAGTAGGTTCTGTTCATCTGCCTCCTCCAGAATTTTCTCGATACTACT
 
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JMFF009N16+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTCAGTATTCTCCGTCCTTTCTT
JMFF041K04+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMFF044F07+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMFF003C23+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMSF031P24+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMFF019P22+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMFF018M05+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMSF052J15+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
JMFF038F18+           TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
                      ____________________________________________________________
consensus             TGGTTCTCTGAAGAGAAATGATTTGATCTCTCCACGCTTTAGTATTCTCCGTCCTTTCTT
 
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JMFF009N16+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF041K04+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF044F07+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF003C23+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCNTGGAAGAAGAATT
JMSF031P24+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF019P22+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF018M05+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMSF052J15+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
JMFF038F18+           CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCNTGGAAGAAGAATT
                      ____________________________________________________________
consensus             CTTTTCCTGAGGCGCTTTCTTTTCTGTTCCATTAATTTGCTTATCCTTGGAAGAAGAATT
 
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JMFF009N16+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMFF041K04+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMFF044F07+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMFF003C23+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMSF031P24+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMFF019P22+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMFF018M05+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
JMSF052J15+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCNGCCTTTCTTTCCCATCTTCCTAGC
JMFF038F18+           GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
                      ____________________________________________________________
consensus             GGGCACAAAAACCCTTTTGATGGCAGAAAACCAGCTGCCTTTCTTTCCCATCTTCCTAGC
 
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JMFF009N16+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF041K04+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF044F07+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF003C23+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMSF031P24+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF019P22+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF018M05+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMSF052J15+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
JMFF038F18+           ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
                      ____________________________________________________________
consensus             ATTACTCTACTTCACCCTCTCAAGTGTTTTTTCGTCTTCCATACCCTTTCAGAAAAGCTG
 
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JMFF009N16+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMFF041K04+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMFF044F07+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAG--CTCTCTCTCTCTCTCTCT
JMFF003C23+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMSF031P24+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMFF019P22+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMFF018M05+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMSF052J15+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
JMFF038F18+           CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
                      ____________________________________________________________
consensus             CATCCAACCCAAAAGCTCAGCTCAGCTCAGCTCAACCCAGCTCTCTCTCTCTCTCTCTCT
 
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JMFF009N16+           CTAGAATTCCT                                                 
JMFF041K04+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAAT                  
JMFF044F07+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATC                 
JMFF003C23+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATCCT               
JMSF031P24+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATCCT               
JMFF019P22+           C                                                           
JMFF018M05+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAAT                  
JMSF052J15+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATCCT               
JMFF038F18+           CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATCCTGCTTTACAAGTATAC
                      ____________________________________________________________
consensus             CTAGAATTCCTGTTCTTTCTTTCTCTTTCTAGCAGACCCAATCCTGCTTTACAAGTATAC