Contig 004600:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018K17Sequence558004600 (2)ref|XP_009772780.1|6e-66PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr750003996 (2)ref|XP_009772780.1|7e-48PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr
JMFF036F13Sequence560004600 (2)ref|XP_009772780.1|1e-66PREDICTED: mitochondrial substrate carrier family protein E [Nicotiana sylvestr729003996 (2)emb|CBI15123.3|5e-42unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF018K17+                                                     TTCCAAATAGAGCAGCCA
JMFF036F13+                                                   CCTTCCAAATAGAGCAGCCA
                      ____________________________________________________________
consensus                                                     CCTTCCAAATAGAGCAGCCA
 
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JMFF018K17+           GCTTGAAAAATTCCTGAATAGTAACCATAGTTCATGCCCTGTTTCATGTGGGAGCCATCC
JMFF036F13+           GCTTGAAAAATTCCTGAATAGTAACCATAGTTCATGCCCTGTTTCATGTGGGAGCCATCC
                      ____________________________________________________________
consensus             GCTTGAAAAATTCCTGAATAGTAACCATAGTTCATGCCCTGTTTCATGTGGGAGCCATCC
 
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JMFF018K17+           TTTGATATAACAGAAGTCCAATACTTCCTAGTGCCTTGGACCTATAGCTCCAGCAATGAA
JMFF036F13+           TTTGATATAACAGAAGTCCAATACTTCCTAGTGCCTTGGACCTATAGCTCCAGCAATGAA
                      ____________________________________________________________
consensus             TTTGATATAACAGAAGTCCAATACTTCCTAGTGCCTTGGACCTATAGCTCCAGCAATGAA
 
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JMFF018K17+           ATGTGCCCAGTGGCCACTAAGATTTGGATGGGAATGTTCAATCCACTTTTTTGTGGACTC
JMFF036F13+           ATGTGCCCAGTGGCCACTAAGATTTGGATGGGAATGTTCAATCCACTTTTTTGTGGACTC
                      ____________________________________________________________
consensus             ATGTGCCCAGTGGCCACTAAGATTTGGATGGGAATGTTCAATCCACTTTTTTGTGGACTC
 
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JMFF018K17+           TATGACCCCAAAATATGTAGCTCCAGTAGCAAGAGATCCCGTAATTCCCGGTGTTACTCC
JMFF036F13+           TATGACCCCAAAATATGTAGCTCCAGTAGCAAGAGATCCCGTAATTCCCGGTGTTACTCC
                      ____________________________________________________________
consensus             TATGACCCCAAAATATGTAGCTCCAGTAGCAAGAGATCCCGTAATTCCCGGTGTTACTCC
 
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JMFF018K17+           TCTATAAAATCCAGCTAAACTATCTTTAGCCCAAACAGTTCGGATCATCTGTAATACACT
JMFF036F13+           TCTATAAAATCCAGCTAAACTATCTTTAGCCCAAACAGTTCGGATCATCTGTAATACACT
                      ____________________________________________________________
consensus             TCTATAAAATCCAGCTAAACTATCTTTAGCCCAAACAGTTCGGATCATCTGTAATACACT
 
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JMFF018K17+           TTTCTGGTTCTGAGACCCACTGAGAATGGCTTGGCTTTGAATGCGAGTTTTAATGGTATC
JMFF036F13+           TTTCTGGTTCTGAGACCCACTGAGAATGGCTTGGCTTTGAATGCGAGTTTTAATGGTATC
                      ____________________________________________________________
consensus             TTTCTGGTTCTGAGACCCACTGAGAATGGCTTGGCTTTGAATGCGAGTTTTAATGGTATC
 
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JMFF018K17+           CATCGGGTGCATCATTCCTTCCCCAAAAGCTCCGGCAATTGCACCCCATACGAACTCCCT
JMFF036F13+           CATCGGGTGCATCATTCCTTCCCCAAAAGCTCCGGCAATTGCACCCCATACGAACTCCCT
                      ____________________________________________________________
consensus             CATCGGGTGCATCATTCCTTCCCCAAAAGCTCCGGCAATTGCACCCCATACGAACTCCCT
 
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JMFF018K17+           CCAAACGAAAAACTGGTTGCGGGTTGAGTTGTTAGGATGAGCTGTTAGAGCTTTTGATGA
JMFF036F13+           CCAAACGAAAAACTGGTTGCGGGTTGAGTTGTTAGGATGAGCTGTTAGAGCTTTTGATGA
                      ____________________________________________________________
consensus             CCAAACGAAAAACTGGTTGCGGGTTGAGTTGTTAGGATGAGCTGTTAGAGCTTTTGATGA
 
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JMFF018K17+           ATGTTTAGAAGTTGGACTTGAGGACGCCATTGATGAACTGTGCAGCCGGGGGAAA     
JMFF036F13+           ATGTTTAGAAGTTGGACTTGAGGACGCCATTGATGAACTGTGCAGCCGGGGGAAAACGCT
                      ____________________________________________________________
consensus             ATGTTTAGAAGTTGGACTTGAGGACGCCATTGATGAACTGTGCAGCCGGGGGAAAACGCT