Contig 004591:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031D16Sequence576004591 (5)ref|XP_009804866.1|85.5PREDICTED: uncharacterized protein LOC104250033 [Nicotiana sylvestris]380004591 (5)
JMFF034B09Sequence492004591 (5)ref|XP_009804866.1|85.5PREDICTED: uncharacterized protein LOC104250033 [Nicotiana sylvestris]689004591 (5)ref|XP_009804866.1|126PREDICTED: uncharacterized protein LOC104250033 [Nicotiana sylvestris]
JMFN002C09Sequence473004591 (5)ref|XP_007209548.1|3e-17hypothetical protein PRUPE_ppa010812mg [Prunus persica] gb|EMJ10747.1| hypotheti

Alignment

This contig is upended


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rJMFF034B09-                                  AATAAATAATAATAGTAATATTCTAAAACGGTTCAA
                      ____________________________________________________________
consensus                                     AATAAATAATAATAGTAATATTCTAAAACGGTTCAA
 
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rJMFF034B09-          CGCTTAAATGGCGAGCGCTCTTGGACGACCTTCGGTTGCCGGAACGCCTTCACGGGGCTC
                      ____________________________________________________________
consensus             CGCTTAAATGGCGAGCGCTCTTGGACGACCTTCGGTTGCCGGAACGCCTTCACGGGGCTC
 
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rJMFF031D16-                     TCCTTTCGCCTTCGTAAAATCTCCGACGCCGCAACCTGTACGTCACCTC
rJMFF034B09-          CGGAAATGCCATCCTTTCGCCTTCGTAAAATCTCCGACGCCGCAACCTG-ACGTCACCTC
JMFF031D16+                                  CGTAAAATCTCCGACGCCGCAACCTG-ACGTCACCTC
                      ____________________________________________________________
consensus             CGGAAATGCCATCCTTTCGCCTTCGTAAAATCTCCGACGCCGCAACCTG-ACGTCACCTC
 
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JMFN002C09+                                                   CCACAATTCCCCTGTCGCCG
rJMFF031D16-          CACGCT-CACCGATCTCGACCTCATAANCACCGCGAAAT-CCACAATTCCCCTGTCNCCG
rJMFF034B09-          CACGCT-CACCGATCTCGACCTCATAAGCACCGCGAAAT-CCACAATTCCCCTGTCGCCG
JMFF031D16+           CACGCTCCACCGATCTCGACCTCATAAGCACCGCGAAATCCCACAATTCCCCTGTCGCCG
JMFF034B09+                                                           CCCCTGTCGCCG
                      ____________________________________________________________
consensus             CACGCT-CACCGATCTCGACCTCATAAGCACCGCGAAAT-CCACAATTCCCCTGTCGCCG
 
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JMFN002C09+           GCGCCGCTACACCGAGCGGAGACGAATTTCACTTCGGATTGCTTCTCTTCCTTCACCTCC
rJMFF031D16-          GNGCCGCTACACCGAGCGGANACNAATTTCACTTCNGATTGCTTCTCTTCCTTCACCTCC
rJMFF034B09-          GCGCCGCTACACCGAGCGGAGACGAATTTCACTTCGGATTGCTTCTCTTCCTTCACCTCC
JMFF031D16+           GCGCCGCTACACCGAGCGGAGACGAATTTCACTTCGGATTGCTTCTCTTCCTTCACCTCC
JMFF034B09+           GCGCCGCTACACCGAGCGGAGACGAATTTCACTTCGGATTGCTTCTCTTCCTTCACCTCC
                      ____________________________________________________________
consensus             GCGCCGCTACACCGAGCGGAGACGAATTTCACTTCGGATTGCTTCTCTTCCTTCACCTCC
 
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JMFN002C09+           GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
rJMFF031D16-          GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
rJMFF034B09-          GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
JMFF031D16+           GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
JMFF034B09+           GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
                      ____________________________________________________________
consensus             GATTTCCTCGCGCTCTTGCTCGAGTACTTGAATAAGGATCGGAACCACGCCGCCTTGCTC
 
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JMFN002C09+           TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGCCGTCGCGTGGTCGGAGA
rJMFF031D16-          TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGNCGTCNCGTGGTCNGAGA
rJMFF034B09-          TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGCCGTCGCGTGGTCGGAGA
JMFF031D16+           TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGCCGTCGCGTGGTCGGAGA
JMFF034B09+           TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGCCGTCGCGTGGTCGGAGA
                      ____________________________________________________________
consensus             TGGCAGTTCGGCGGCGGATTCCGCCGGAAGGAGCCGGAGAGGCCGTCGCGTGGTCGGAGA
 
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JMFN002C09+           ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
rJMFF031D16-          ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
rJMFF034B09-          ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
JMFF031D16+           ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
JMFF034B09+           ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
                      ____________________________________________________________
consensus             ATGGTGACCCCGACCGATTTCGATCGCCGGAAGTCCGGCTCGCAGCCGATTTCGCCGCCG
 
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JMFN002C09+           CCGAAGGACGAGGAAGCGGAGGAGGAGGAGGAGGTGGTGGCGGCGAGATATGCGCAGGGG
rJMFF031D16-          CCGAAGGACGANGAAGCGGAGGATGAGGAGGAG                           
rJMFF034B09-          CCGAAGGACGAGGAAGCGGAGGAGGAGGAGGAGGTGGTGGCGGCGAGATATGCGCAGGGG
JMFF031D16+           CCGAAGGACGAGGAAGCGGAGGAGGAGGAGGAGGTGGTGGCGGCGAGATATGCGCAGGGG
JMFF034B09+           CCGAAGGACGAGGAAGCGGAGGAGGAGGAGGAGGTGGTGGCGGCGAGATATGCGCAGGGG
                      ____________________________________________________________
consensus             CCGAAGGACGAGGAAGCGGAGGAGGAGGAGGAGGTGGTGGCGGCGAGATATGCGCAGGGG
 
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JMFN002C09+           CGGACGGCGGCGCAATCGCGGCTGAGAATGGCAAGACGTTCCTTCAAGCAAACGGGGCAC
rJMFF034B09-          CGGACGGCGGCGCAATCGCGGCTGAGAATGGCAAGACGTTCCTTCAAGCAAACGGGGCAC
JMFF031D16+           CGGACGGCGGCGCAATCGCGGCTGAGAATGGCAAGACGTTCCTTCAAGCAAACGGGGCAC
JMFF034B09+           CGGACGGCGGCGCAATCGCGGCTGAGAATGGCAAGACGTTCCTTCAAGCAAACGGGGCAC
                      ____________________________________________________________
consensus             CGGACGGCGGCGCAATCGCGGCTGAGAATGGCAAGACGTTCCTTCAAGCAAACGGGGCAC
 
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JMFN002C09+           ACTCCGTTTCTCTCTCTATTTGAAGGGTGTTTTAGACATTTCCAAGCTTCTTCTTCTACT
rJMFF034B09-          ACTCCGTTTCTCTCTCTATTTGAAGGGTGTTTTAGACATTTCCAAGCTTCTTCTTCTACT
JMFF031D16+           ACTCCGTTTCTCTCTCTATTTGAAGGGTGTTTTAGACATTTCCAAGCTTCTTCTTCTACT
JMFF034B09+           ACTCCGTTTCTCTCTCTATTTGAAGGGTGTTTTAGACATTTCCAAGCTTCTTCTTCTACT
                      ____________________________________________________________
consensus             ACTCCGTTTCTCTCTCTATTTGAAGGGTGTTTTAGACATTTCCAAGCTTCTTCTTCTACT
 
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JMFN002C09+           ATTATAGGCGCCGCCATTAGAGTAAGCGTTTC                            
rJMFF034B09-          ATTATAGGCGCCGCCATTAGAGTAAGCGTTTCTCTCTCTCTCTCCTTTTGCCTTGG    
JMFF031D16+           ATTATAGGCGCCGCCATTAGAGTAAGCGTTTCTCTCTCTCTCTCCTTTTGCCTTGG    
JMFF034B09+           ATTATAGGCGCCGCCATTAGAGTAAGCGTTTCTCTCTCTCTCTCCTTTTGCCTTGGGAAT
                      ____________________________________________________________
consensus             ATTATAGGCGCCGCCATTAGAGTAAGCGTTTCTCTCTCTCTCTCCTTTTGCCTTGGGAAT