Contig 004589:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C20Sequence538004589 (2)dbj|BAE94395.1|8e-114bHLH transcriptional regulator [Ipomoea nil]
JMFF033J08Sequence539004589 (2)dbj|BAE94395.1|9e-111bHLH transcriptional regulator [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012C20+ TCTTTGCAAGTAAGGATCGGGTAAATATTCTGCTGTCAGCTTGGTG
JMFF033J08+ GAACCGATGCACTTCTTTGCAAGTAAGGATCGGGTAAATATTCTGCTGTCAGCTTGGTG
                      ____________________________________________________________
consensus GAACCGATGCACTTCTTTGCAAGTAAGGATCGGGTAAATATTCTGCTGTCAGCTTGGTG
 
. : . : . : . : . : . :
JMFF012C20+ TGCATTGCATAGCCAAATACTTTGGTTCTTCGAAAGTGCCTTCCCAGGCAACCCTTGGCC
JMFF033J08+ TGCATTGCATAGCCAAATACTTTGGTTCTTCGAAAGTGCCTTCCCAGGCAACCCTTGGCC
                      ____________________________________________________________
consensus TGCATTGCATAGCCAAATACTTTGGTTCTTCGAAAGTGCCTTCCCAGGCAACCCTTGGCC
 
. : . : . : . : . : . :
JMFF012C20+ TACATTGAATACGAACGACATGCAAACCAAAAAATACCACTCGGTATCCGTGAGATCTTC
JMFF033J08+ TACATTGAATACGAACGACATGCAAACCAAAAAATACCACTCGGTATCCGTGAGATCTTC
                      ____________________________________________________________
consensus TACATTGAATACGAACGACATGCAAACCAAAAAATACCACTCGGTATCCGTGAGATCTTC
 
. : . : . : . : . : . :
JMFF012C20+ CGGTGATAATGCTGTAGGATGTATCTTTGCTAGCGTGTTGGCTTCAGCGGCTAAGAGAGA
JMFF033J08+ CGGTGATAATGCTGTAGGATGTATCTTTGCTAGCGTGTTGGCTTCAGCGGCTAAGAGAGA
                      ____________________________________________________________
consensus CGGTGATAATGCTGTAGGATGTATCTTTGCTAGCGTGTTGGCTTCAGCGGCTAAGAGAGA
 
. : . : . : . : . : . :
JMFF012C20+ ATCATAAAGCTCTCTCAAGTGCTCGGTTCTCTGCAATCCTAGCAGATCGGGACTAATTTC
JMFF033J08+ ATCATAAAGCTCTCTCAAGTGCTCGGTTCTCTGCAATCCTAGCAGATCGGGACTAATTTC
                      ____________________________________________________________
consensus ATCATAAAGCTCTCTCAAGTGCTCGGTTCTCTGCAATCCTAGCAGATCGGGACTAATTTC
 
. : . : . : . : . : . :
JMFF012C20+ TGTTGCCTGCACTGTTTTCCTCGTCTTTATATCTCCGTTGTAGTACCCATCGCCCCATTC
JMFF033J08+ TGTTGCCTGCACTGTTTTCCTCGTCTTTATATCTCCGTTGTAGTACCCATCGCCCCATTC
                      ____________________________________________________________
consensus TGTTGCCTGCACTGTTTTCCTCGTCTTTATATCTCCGTTGTAGTACCCATCGCCCCATTC
 
. : . : . : . : . : . :
JMFF012C20+ CAAAACCCCTGGCTGGGAAGAGGAAATGGACCAGAAGATAGCATAGCACCATTCAATATT
JMFF033J08+ CAAAACCCCTGGCTGGGAAGAGGAAATGGACCAGAAGATAGCATAGCACCATTCAATATT
                      ____________________________________________________________
consensus CAAAACCCCTGGCTGGGAAGAGGAAATGGACCAGAAGATAGCATAGCACCATTCAATATT
 
. : . : . : . : . : . :
JMFF012C20+ TCTAACTGCAAAACCAAGCTTCTCTCTAAAGTTTTCTGCAAATCCTTCCTGATCTTCACA
JMFF033J08+ TCTAACTGCAAAACCAAGCTTCTCTCTAAAGTTTTCTGCAAATCCTTCCTGATCTTCACA
                      ____________________________________________________________
consensus TCTAACTGCAAAACCAAGCTTCTCTCTAAAGTTTTCTGCAAATCCTTCCTGATCTTCACA
 
. : . : . : . : . : . :
JMFF012C20+ CCCCTTTGCCATTATCAAGCTCAGCTCACTCTTAACAAAGGGCACTCAAAAAATTATTAT
JMFF033J08+ CCCCTTTGCCATTATCAAGCTCAGCTCACTCTTAACAAAGGGCACTCAAAAAATTATTAT
                      ____________________________________________________________
consensus CCCCTTTGCCATTATCAAGCTCAGCTCACTCTTAACAAAGGGCACTCAAAAAATTATTAT