Contig 004588:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013C07Sequence583004588 (10)ref|XP_002304225.1|5e-58Profilin 3 family protein [Populus trichocarpa] ref|XP_011011002.1| PREDICTED: p645004588 (10)gb|EMS66850.1|3e-58Profilin-2/4 [Triticum urartu]
JMFF018P16Sequence472004588 (10)ref|XP_009120170.1|4e-56PREDICTED: profilin-5 [Brassica rapa]679004588 (10)gb|EMS66850.1|3e-58Profilin-2/4 [Triticum urartu]
JMFF033H23Sequence550004588 (10)ref|XP_002304225.1|4e-58Profilin 3 family protein [Populus trichocarpa] ref|XP_011011002.1| PREDICTED: p718004588 (10)gb|EMS66850.1|6e-57Profilin-2/4 [Triticum urartu]
JMFF049B03Sequence637004588 (10)ref|XP_002304225.1|2e-57Profilin 3 family protein [Populus trichocarpa] ref|XP_011011002.1| PREDICTED: p610004588 (10)gb|ABC02750.1|2e-37profilin [Litchi chinensis]
JMFN008K08Sequence616004588 (10)ref|XP_002304225.1|9e-58Profilin 3 family protein [Populus trichocarpa] ref|XP_011011002.1| PREDICTED: p
JMFN015J06Sequence624004588 (10)ref|XP_004149180.1|3e-28PREDICTED: profilin-like [Cucumis sativus] ref|XP_004158480.1| PREDICTED: profil

Alignment

This contig is upended


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rJMFF049B03-                                                       CGCGAGTTTTTTTTT
                      ____________________________________________________________
consensus                                                          CGCGAGTTTTTTTTT
 
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rJMFF049B03-          TTTTTTTGATTAAAGAATAGTTTATAACAAACTTGTTTATTTGGAATTTAGATACAGCTC
rJMFF033H23-                 GATTAAAGAATAGTTTATAACAAACTTGTTTATTTGGAATTTAGATACAGCTC
rJMFF018P16-                                                                 AGCTC
                      ____________________________________________________________
consensus             TTTTTTTGATTAAAGAATAGTTTATAACAAACTTGTTTATTTGGAATTTAGATACAGCTC
 
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rJMFF049B03-          CCCAATTACAAACTGAGATTATAAAATAACAAAAAAAGGGAAACTTGAAAAGTTTCACAG
rJMFF033H23-          CCCAATTACAAACTGAGATTATAAAATAACAAAAAAAGGGAAACTTGAAAAGTTTCACAG
rJMFF013C07-                                        AAAAAAAGGGAAACTTGAAAAGTTTCACAG
JMFN015J06+                                                       TTGAAAAGTTTCACAG
rJMFF018P16-          CCCAATTACAAACTGAGATTATAAAATAACAAAAAAAGGGAAACTTGAAAAGTTTCACAG
                      ____________________________________________________________
consensus             CCCAATTACAAACTGAGATTATAAAATAACAAAAAAAGGGAAACTTGAAAAGTTTCACAG
 
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rJMFF049B03-          ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
rJMFF033H23-          ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
rJMFF013C07-          ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
JMFN015J06+           ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
rJMFF018P16-          ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
JMFN008K08+                        ATAAGCAGTGTAATCANATTCACTGCAACGAAACAACCCAAAACATG
JMFF049B03+                                  TAATCAAATTCACTGCAACGAAACAACCCAAAACATG
                      ____________________________________________________________
consensus             ACCCAAGAACCTAATAAGCAGTGTAATCAAATTCACTGCAACGAAACAACCCAAAACATG
 
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rJMFF049B03-          AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
rJMFF033H23-          AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
rJMFF013C07-          AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
JMFN015J06+           AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
rJMFF018P16-          AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
JMFN008K08+           AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
JMFF013C07+                            AGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
JMFF049B03+           AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
JMFF033H23+                                                             ATCACTACTA
                      ____________________________________________________________
consensus             AAAAAACAACTCTCCCAAGGGAGAAGGAAAGACATTATTATGAAAACCCTATCACTACTA
 
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rJMFF049B03-          GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
rJMFF033H23-          GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
rJMFF013C07-          GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
JMFN015J06+           GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
rJMFF018P16-          GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
JMFN008K08+           GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
JMFF013C07+           GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
JMFF049B03+           GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
JMFF033H23+           GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
                      ____________________________________________________________
consensus             GACTTCTCAGCAGCATGGAGGAGCCATTATTGGAGCAATACCAGAATACTTAAAAGCCCT
 
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rJMFF049B03-          GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
rJMFF033H23-          GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
rJMFF013C07-          GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFN015J06+           GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
rJMFF018P16-          GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFN008K08+           GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFF013C07+           GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFF049B03+           GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFF018P16+                ACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
JMFF033H23+           GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
                      ____________________________________________________________
consensus             GATCAACCAGGTAATCACCAAGCCTTTCAACAACCAGGTTGCACTGGCCTGGAGTCATTG
 
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rJMFF049B03-          GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
rJMFF033H23-          GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
rJMFF013C07-          GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFN015J06+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
rJMFF018P16-          GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFN008K08+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFF013C07+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFF049B03+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFF018P16+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
JMFF033H23+           GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
                      ____________________________________________________________
consensus             GCTCATCATATAGCCCAAACAGCAAGCACTGGGTAGTCTTCTTGATGCAAATGCCACCAG
 
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rJMFF049B03-          GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
rJMFF033H23-          GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
rJMFF013C07-          GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFN015J06+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
rJMFF018P16-          GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFN008K08+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFF013C07+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFF049B03+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFF018P16+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
JMFF033H23+           GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
                      ____________________________________________________________
consensus             GCCCCTTCTTGCCTCGAACAACCACGCCTGGCTCGCCTTGAATCACCATGTATTTTGCAC
 
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rJMFF049B03-          CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCANAATCCTTCAAGATAG
rJMFF033H23-          CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
rJMFF013C07-          CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFN015J06+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTC-AGATAG
rJMFF018P16-          CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFN008K08+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFF013C07+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFF049B03+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFF018P16+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
JMFF033H23+           CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
                      ____________________________________________________________
consensus             CACTAATGTGCATGCCAGTGGGAGCGAGAGACCCGGGCTCATCAAAATCCTTCAAGATAG
 
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rJMFF049B03-          AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCT     
rJMFF033H23-          AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
rJMFF013C07-          AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFN015J06+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
rJMFF018P16-          AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFN008K08+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFF013C07+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFF049B03+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFF018P16+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
JMFF033H23+           AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
                      ____________________________________________________________
consensus             AAGTGATTTCCGCTGGGCTTATCTGAGGGAAATTGGCGCTCTGGGCCCAAACGCTGCCAT
 
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rJMFF033H23-          CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGANGTGCT
rJMFF013C07-          CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFN015J06+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
rJMFF018P16-          CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFN008K08+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFF013C07+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFF049B03+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFF018P16+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
JMFF033H23+           CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
                      ____________________________________________________________
consensus             CGAGGCCGAGGATAGCGGCGGCGCTGAGCTTGTTGCCCTCAATGTCGCACATGAGGTGCT
 
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rJMFF033H23-          CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTANAATTTCTTGGACGAT
rJMFF013C07-          CATCAACATATGTTTGCCACGACATCTTTGANATTTTTTGATTAAAATTTCTTGGACG  
JMFN015J06+           CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
rJMFF018P16-          CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
JMFN008K08+           CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
JMFF013C07+           CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
JMFF049B03+           CATCAACATATGTTTGCCACGACATCTTTGGGATTTTTTGATTAGAATTTCTTGGACGAT
JMFF018P16+           CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
JMFF033H23+           CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
                      ____________________________________________________________
consensus             CATCAACATATGTTTGCCACGACATCTTTGAGATTTTTTGATTAGAATTTCTTGGACGAT
 
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rJMFF033H23-          T                                                           
JMFN015J06+           TTTA                                                        
rJMFF018P16-          TTTAGTTTGAGAGA                                              
JMFN008K08+           TTTAGTTTGAGAGAGAGAGAGAGAGAAGT                               
JMFF013C07+           TTTAGTTTGAGAGAGAGAGAGAGAGAAGTGTATGAAACTATTGCTTCAAAAACAATT   
JMFF049B03+           TTTAGTTTGAGAGAGAGAGAGAGAGAAGTGTATGAAACTATTGCTTCAAAAACAATT   
JMFF018P16+           TTTAGTTTGAGAGAGAGAGAGAGAGAAGTGTATGAAACTATTGCTTCAAAAACAATT   
JMFF033H23+           TTTAGTTTGAGAGAGAGAGAGAGAGAAGTGTATGAAACTATTGCTTCAAAAACAATTGAT
                      ____________________________________________________________
consensus             TTTAGTTTGAGAGAGAGAGAGAGAGAAGTGTATGAAACTATTGCTTCAAAAACAATTGAT