Contig 004577:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030A15Sequence459004577 (2)ref|XP_010272667.1|5e-08PREDICTED: protein FLX-like 1 [Nelumbo nucifera] ref|XP_010272668.1| PREDICTED:
JMFF030A17Sequence503004577 (2)ref|XP_009344608.1|9e-16PREDICTED: protein FLX-like 1 isoform X1 [Pyrus x bretschneideri] ref|XP_0093446

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF030A17+ TCCTCATGCTGAGCTGCAAGATG
                      ____________________________________________________________
consensus TCCTCATGCTGAGCTGCAAGATG
 
. : . : . : . : . : . :
JMFF030A17+ CTCCTCAAGGATAGCAGGGTGTGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
JMFF030A15+ TGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
                      ____________________________________________________________
consensus CTCCTCAAGGATAGCAGGGTGTGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
 
. : . : . : . : . : . :
JMFF030A17+ CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
JMFF030A15+ CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
                      ____________________________________________________________
consensus CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
 
. : . : . : . : . : . :
JMFF030A17+ TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
JMFF030A15+ TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
                      ____________________________________________________________
consensus TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
 
. : . : . : . : . : . :
JMFF030A17+ ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
JMFF030A15+ ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
                      ____________________________________________________________
consensus ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
 
. : . : . : . : . : . :
JMFF030A17+ CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
JMFF030A15+ CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
                      ____________________________________________________________
consensus CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
 
. : . : . : . : . : . :
JMFF030A17+ AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
JMFF030A15+ AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
                      ____________________________________________________________
consensus AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
 
. : . : . : . : . : . :
JMFF030A17+ GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
JMFF030A15+ GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
                      ____________________________________________________________
consensus GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
 
. : . : . : . : . : . :
JMFF030A17+ TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC
JMFF030A15+ TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC
                      ____________________________________________________________
consensus TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC