Contig 004577:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+                                                TCCTCATGCTGAGCTGCAAGATG
                      ____________________________________________________________
consensus                                                  TCCTCATGCTGAGCTGCAAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           CTCCTCAAGGATAGCAGGGTGTGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
JMFF030A15+                                TGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
                      ____________________________________________________________
consensus             CTCCTCAAGGATAGCAGGGTGTGGAGCAATTTGCCTGGGCGGCGGCATCCCATACTGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
JMFF030A15+           CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
                      ____________________________________________________________
consensus             CTCTCTCATTTCCTCAAGCATTACAGGATAAGGAACTGGCCCGCGGCCTCTTGCAAAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
JMFF030A15+           TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
                      ____________________________________________________________
consensus             TGGCGGCTCATGAATAGGTGGAGCCATCACAGTGTGGGGTGCACCTTTTATCGAATGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
JMFF030A15+           ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
                      ____________________________________________________________
consensus             ACCAAGATTTCGTCCAGACATTTATTTTTTCTTTTTATCAAGACGATATGTACAAAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
JMFF030A15+           CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
                      ____________________________________________________________
consensus             CAATCCAATTTGATTCCTTTGCCCAACCGCAATCGCTTCTCCGACAGGCTTCCGTGAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
JMFF030A15+           AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
                      ____________________________________________________________
consensus             AGATATTGATCACGATGAAGTCACCTTCTCTAGTAATCACAGAAAGCAAAACCCTAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
JMFF030A15+           GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
                      ____________________________________________________________
consensus             GGATGAAGAAGCAAGGGAGGATGCAATTAGCCAATTATAAGCTTATACGATCTTCGGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030A17+           TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC
JMFF030A15+           TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC
                      ____________________________________________________________
consensus             TTGGACTACGCTTCATTCACTTCTCTCATTCTATCCGTTTTCTCACCTAAATTTTTCTTC