Contig 004571:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+                               TTCATTGACCGGACTTTCCACTTCCCATCAACCCACCAAC
                      ____________________________________________________________
consensus                                 TTCATTGACCGGACTTTCCACTTCCCATCAACCCACCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           CCCACGTATCTAACCTCCGTCGCGAACCTCACCAGCTCAGTAATCCGAAATTCTCCGGCG
JMFF028K24+                                      CTCACCAGCTCAGTAATCCGAAATTCTCCGGCG
                      ____________________________________________________________
consensus             CCCACGTATCTAACCTCCGTCGCGAACCTCACCAGCTCAGTAATCCGAAATTCTCCGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           AAATCCTTCAAGTACTCCAGAACTTCCCGGTGACCGGGAAATCGCCGCGGATCTCGCCGG
JMFF028K24+           AAATCCTTCAAGTACTCCAGAACTTCCCGGTGACCGGGAAATCGCCGCGGATCTCGCCGG
                      ____________________________________________________________
consensus             AAATCCTTCAAGTACTCCAGAACTTCCCGGTGACCGGGAAATCGCCGCGGATCTCGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           GGCTTTTTCGTGTCCACAAACGGGTAATCCAGGAAACCCATTACTTCCCGGGGGAGATTA
JMFF028K24+           GGCTTTTTCGTGTCCACAAACGGGTAATCCAGGAAACCCATTACTTCCCGGGGGAGATTA
                      ____________________________________________________________
consensus             GGCTTTTTCGTGTCCACAAACGGGTAATCCAGGAAACCCATTACTTCCCGGGGGAGATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           GTCCGGAGAGAAGCATAGAGGCTCGACTGAACGACTTCCCTGCACGGTTCAAGTCCTAGC
JMFF028K24+           GTCCGGAGAGAAGCATAGAGGCTCGACTGAACGACTTCCCTGCACGGTTCAAGTCCTAGC
                      ____________________________________________________________
consensus             GTCCGGAGAGAAGCATAGAGGCTCGACTGAACGACTTCCCTGCACGGTTCAAGTCCTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           GGATCGGACTCGACAGCTGAAGTATACACCCAGGTGCCTCCGAGCTGGCTTTCCCGCTCA
JMFF028K24+           GGATCGGACTCGACAGCTGAAGTATACACCCAGGTGCCTCCGAGCTGGCTTTCCCGCTCA
                      ____________________________________________________________
consensus             GGATCGGACTCGACAGCTGAAGTATACACCCAGGTGCCTCCGAGCTGGCTTTCCCGCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           AAAACCACCACGCCGTGTCCCTCTCGCCGGAGCTCCCGGGCCGCCACTAGTCCCGCCGCC
JMFF028K24+           AAAACCACCACGCCGTGTCCCTCTCGCCGGAGCTCCCGGGCCGCCACTAGTCCCGCCGCC
                      ____________________________________________________________
consensus             AAAACCACCACGCCGTGTCCCTCTCGCCGGAGCTCCCGGGCCGCCACTAGTCCCGCCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           CCGGCGCCGATAACGGCGACGTTCTTGGAAGTGATCGGACGCATTGGATTGAGGTGGAAC
JMFF028K24+           CCGGCGCCGATAACGGCGACGTTCTTGGAAGTGATCGGACGCATTGGATTGAGGTGGAAC
                      ____________________________________________________________
consensus             CCGGCGCCGATAACGGCGACGTTCTTGGAAGTGATCGGACGCATTGGATTGAGGTGGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016K07+           ATATGTGCGCTTGCAGAACCGTTCCTTAAGATGACGAAATCATAAACGTGACGTTTCTGT
JMFF028K24+           ATATGTGCGCTTGCAGAACCGTTCCTTAAGATGACGAAATCATAAACGTGACGTTTCTGT
                      ____________________________________________________________
consensus             ATATGTGCGCTTGCAGAACCGTTCCTTAAGATGACGAAATCATAAACGTGACGTTTCTGT