| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023O12 | Sequence | 416 | 004566 (4) | ref|XP_009760681.1| | 192 | PREDICTED: phosphoglucomutase, cytoplasmic-like [Nicotiana sylvestris] | 778 | 006896 (11) | gb|KJB74516.1| | 1e-132 | hypothetical protein B456_012G1818003, partial [Gossypium raimondii] gb|KJB74517 |
| JMFF025B11 | Sequence | 613 | 004566 (4) | gb|EYU30098.1| | 3e-80 | hypothetical protein MIMGU_mgv1a003482mg [Erythranthe guttata] gb|EYU30099.1| hy | 781 | 006896 (11) | ref|XP_009783552.1| | 1e-133 | PREDICTED: phosphoglucomutase, cytoplasmic-like isoform X2 [Nicotiana sylvestri |
| JMFF027E08 | Sequence | 577 | 004566 (4) | gb|EYU30098.1| | 8e-80 | hypothetical protein MIMGU_mgv1a003482mg [Erythranthe guttata] gb|EYU30099.1| hy | 771 | 006896 (11) | gb|KJB74516.1| | 5e-115 | hypothetical protein B456_012G1818003, partial [Gossypium raimondii] gb|KJB74517 |
| JMFF033L23 | Sequence | 265 | 004566 (4) | ref|XP_009760681.1| | 106 | PREDICTED: phosphoglucomutase, cytoplasmic-like [Nicotiana sylvestris] | 652 | 006896 (11) | gb|KJB74516.1| | 8e-100 | hypothetical protein B456_012G1818003, partial [Gossypium raimondii] gb|KJB74517 |
This contig is upended
. : . : . : . : . : . :
JMFF025B11+ ACTGCAGAGATGT
____________________________________________________________
consensus ACTGCAGAGATGT
. : . : . : . : . : . :
JMFF025B11+ CCACATCAGGCAAGTCCTCTGCAATCAAGTATTCCTTTATTGTTGTGGTGATCTCATAGA
JMFF027E08+ ATCAAGTATTCCTTTATTGTTGTGGTGATCTCATAGA
____________________________________________________________
consensus CCACATCAGGCAAGTCCTCTGCAATCAAGTATTCCTTTATTGTTGTGGTGATCTCATAGA
. : . : . : . : . : . :
JMFF025B11+ TCTTGTTAGTAATACCTTCTGGTGCAGGACCACCATTTTCCCATGTTGTATTTAATTCCA
JMFF027E08+ TCTTGTTAGTAATACCTTCTGGTGCAGGACCACCATTTTCCCATGTTGTATTTAATTCCA
____________________________________________________________
consensus TCTTGTTAGTAATACCTTCTGGTGCAGGACCACCATTTTCCCATGTTGTATTTAATTCCA
. : . : . : . : . : . :
JMFF025B11+ AAATCCTCAGTCGGGCCACCAGGGTTGTGGCTAGCAGTCAATATAAATGCCCCGTTTGCC
JMFF027E08+ AAATCCTCAGTCGGGCCACCAGGGTTGTGGCTAGCAGTCAATATAAATGCCCCGTTTGCC
____________________________________________________________
consensus AAATCCTCAGTCGGGCCACCAGGGTTGTGGCTAGCAGTCAATATAAATGCCCCGTTTGCC
. : . : . : . : . : . :
JMFF025B11+ TTTGATCCATCAGCCGCTACTCTATCACGAATGACACCAGATACAGCAGGAGTAGACATT
JMFF023O12+ ATCCATCAGCCGCTACTCTATCACGAATGACACCAGATACAGCAGGAGTAGACATT
JMFF027E08+ TTTGATCCATCAGCCGCTACTCTATCACGAATGACACCAGATACAGCAGGAGTAGACATT
____________________________________________________________
consensus TTTGATCCATCAGCCGCTACTCTATCACGAATGACACCAGATACAGCAGGAGTAGACATT
. : . : . : . : . : . :
JMFF025B11+ AATCCATTTAGACCAACCCAAACACGTCTGACTCCATTTGCAGCTGACATTTTAATAATG
JMFF023O12+ AATCCATTTAGACCAACCCAAACACGTCTGACTCCATTTGCAGCTGACATTTTAATAATG
JMFF027E08+ AATCCATTTAGACCAACCCAAACACGTCTGACTCCATTTGCAGCTGACATTTTAATAATG
____________________________________________________________
consensus AATCCATTTAGACCAACCCAAACACGTCTGACTCCATTTGCAGCTGACATTTTAATAATG
. : . : . : . : . : . :
JMFF025B11+ ATCTGGATTGCATCCTTGGAAAAGTACCGACCATCACCAGAGACAACAAGTGTAGCACCT
JMFF023O12+ ATCTGGATTGCATCCTTGGAAAAGTACCGACCATCACCAGAGACAACAAGTGTAGCACCT
JMFF033L23+ ACCAGAGACAACAAGTGTAGCACCT
JMFF027E08+ ATCTGGATTGCATCCTTGGAAAAGTACCGACCATCACCAGAGACAACAAGTGTAGCACCT
____________________________________________________________
consensus ATCTGGATTGCATCCTTGGAAAAGTACCGACCATCACCAGAGACAACAAGTGTAGCACCT
. : . : . : . : . : . :
JMFF025B11+ CGGACTTTCTCAGCTCCAAGGGCGTTGAATGTTGACTGAACAAAATTCTCCAAGTACTTA
JMFF023O12+ CGGACTTTCTCAGCTCCAAGGGCGTTGAATGTTGACTGAACAAAATTCTCCAAGTACTTA
JMFF033L23+ CGGACTTTCTCAGCTCCAAGGGCGTTGAATGTTGACTGAACAAAATTCTCCAAGTACTTA
JMFF027E08+ CGGACTTTCTCAGCTCCAAGGGCGTTGAATGTTGACTGAACAAAATTCTCCAAGTACTTA
____________________________________________________________
consensus CGGACTTTCTCAGCTCCAAGGGCGTTGAATGTTGACTGAACAAAATTCTCCAAGTACTTA
. : . : . : . : . : . :
JMFF025B11+ GGCTGCTTGAATACCTTCACCTTCTTCCTGAGACCAGAAGTTCCAGGCTTCTGGCCTTCG
JMFF023O12+ GGCTGCTTGAATACCTTCACCTTCTTCCTGAGACCAGAAGTTCCAGGCTTCTGGCCTTCG
JMFF033L23+ GGCTGCTNGAATACCTTCACCTTCTTCCTGAGACCAGAAGTTCCAGGCTTNTGGCCTTCG
JMFF027E08+ GGCTGCTTGAATACCTTCACCTTCTTCCTGAGACCAGAAGTTCCAGGCTTCTGGCCTTCG
____________________________________________________________
consensus GGCTGCTTGAATACCTTCACCTTCTTCCTGAGACCAGAAGTTCCAGGCTTCTGGCCTTCG
. : . : . : . : . : . :
JMFF025B11+ AACGGCGTGGTTTCAACGCGACTGACCTTGAACATCGCCATTTCTCCGTTTTCACTCCAA
JMFF023O12+ AACGGCGTGGTTTCAACGCGACTGACCTTGAACATCGCCATTTCTCCGTTTTCACTCCAA
JMFF033L23+ AACGGCGTGGTTTCAACGCGACTGACCTNGAACATCGCCATTTCTCCGTTTTCACTCCAA
JMFF027E08+ AACGGCGTGGTTTCAACGCGACTGACCTTGAACATCGCCATTTCTCCGTTTTCACTCCAA
____________________________________________________________
consensus AACGGCGTGGTTTCAACGCGACTGACCTTGAACATCGCCATTTCTCCGTTTTCACTCCAA
. : . : . : . : . : . :
JMFF025B11+ AGGAAGAGGTTGGCGAAATGAGGGAGGGACGTGTGTGGTGTTTTGGGGATCTTCGGAAGA
JMFF023O12+ AGGAAGAGGTTGGCGAAATGAGGGAGGGACGTGTGTGGTGTTTTGGGGATCTTCGGAAGA
JMFF033L23+ AGGAAGAGGTTGGCGAAATGAGGGAGGGACGTGTGTGGTGTTTTGGGGATCTTCGGAAGA
JMFF027E08+ AGGAAGAGGTTGGCGAAATGAGGGAGGGACGTGTGTGGTGTTTTGGGGATCTTCGGAAGA
____________________________________________________________
consensus AGGAAGAGGTTGGCGAAATGAGGGAGGGACGTGTGTGGTGTTTTGGGGATCTTCGGAAGA