clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF001F16 | Sequence | 610 | 004560 (3) | ref|XP_007210357.1| | 7e-101 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 718 | 005534 (8) | ref|XP_009603996.1| | 2e-56 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
JMFF025G20 | Sequence | 513 | 004560 (3) | ref|XP_007210357.1| | 4e-95 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 240 | 005534 (8) | ref|XP_009603996.1| | 8e-14 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
JMFF034G09 | Sequence | 615 | 004560 (3) | ref|XP_007210357.1| | 1e-113 | hypothetical protein PRUPE_ppa001580mg [Prunus persica] gb|EMJ11556.1| hypotheti | 707 | 005534 (8) | ref|XP_009603996.1| | 1e-42 | PREDICTED: CSC1-like protein At1g32090 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF034G09+ ACATAAAGTAATAATATTTCGCTGCAGATCTCCTTTCAAGCACTGAAAATGCCAC
JMFF001F16+ TGAAAATGCCAC
____________________________________________________________
consensus ACATAAAGTAATAATATTTCGCTGCAGATCTCCTTTCAAGCACTGAAAATGCCAC
. : . : . : . : . : . :
JMFF034G09+ ATGCCCCTCGATCTTCGACATGATCATCAGAATGGTTGGAAGAACATACAGGAAAATCTT
JMFF001F16+ ATGCCCCTCGATCTTCGACATGATCATCAGAATGGTTGGAAGAACATACAGGAAAATCTT
____________________________________________________________
consensus ATGCCCCTCGATCTTCGACATGATCATCAGAATGGTTGGAAGAACATACAGGAAAATCTT
. : . : . : . : . : . :
JMFF034G09+ TAGAGCTAAACCCGGAAGGAAACCTTGTAGGAAAGACTTTACGAATTTCCATTCAATTAA
JMFF001F16+ T--AGCTAAACCCGGAAGGAAACCTTGTAGGAAAGACTTTACGAATTTCCATTCAATTAA
JMFF025G20+ TAGGAAAGACTTTACGAATTTCCATTCAATTAA
____________________________________________________________
consensus TAGAGCTAAACCCGGAAGGAAACCTTGTAGGAAAGACTTTACGAATTTCCATTCAATTAA
. : . : . : . : . : . :
JMFF034G09+ CGGTCTGAGGAAAGGGGCAACTTTTTCTAGACCTTCCAAATTTGCCAGTGATTGCACGAA
JMFF001F16+ CGGTCTGAGGAAAGGGGCAACTTTTTCTAGACCTTCCAAATTTGCCAGTGATTGCACGAA
JMFF025G20+ CGGTCTGAGGAAAGGGGCAACTTTTTCTAGACCTTCCAAATTTGCCAGTGATTGCACGAA
____________________________________________________________
consensus CGGTCTGAGGAAAGGGGCAACTTTTTCTAGACCTTCCAAATTTGCCAGTGATTGCACGAA
. : . : . : . : . : . :
JMFF034G09+ GGCGATAGGTATCAAGTAGAAAAAGACCAAAGCAAAAACCGATATCGCTATCACCAATCT
JMFF001F16+ GGCGATAGGTATCAAGTAGAAAAAGACCAAAGCAAAAACCGATATCGCTATCACCAATCT
JMFF025G20+ GGCGATAGGTATCAAGTAGAAAAAGACCAAAGCAAAAACCGATATCGCTATCACCAATCT
____________________________________________________________
consensus GGCGATAGGTATCAAGTAGAAAAAGACCAAAGCAAAAACCGATATCGCTATCACCAATCT
. : . : . : . : . : . :
JMFF034G09+ CCGGATGCTCAGCGAAACGAATGATATCGATAGGTTCTTCCAGAATATATCCCGAGGCTC
JMFF001F16+ CCGGATGCTCAGCGAAACGAATGATATCGATAGGTTCTTCCAGAATATATCCCGAGGCTC
JMFF025G20+ CCGGATGCTCAGCGAAACGAATGATATCGATAGGTTCTTCCAGAATATATCCCGAGGCTC
____________________________________________________________
consensus CCGGATGCTCAGCGAAACGAATGATATCGATAGGTTCTTCCAGAATATATCCCGAGGCTC
. : . : . : . : . : . :
JMFF034G09+ AGGAGCCCAATTCGTTAACCACAGCGTGGGGTTCTTACTTTGTTGAGTCTGGGCACAAAC
JMFF001F16+ AGGAGCCCAATTCGTTAACCACAGCGTGGGGTTCTTACTTTGTTGAGTCTGGGCACAAAC
JMFF025G20+ AGGAGCCCAATTCGTTAACCACAGCGTGGGGTTCTTACTTTGTTGAGTCTGGGCACAAAC
____________________________________________________________
consensus AGGAGCCCAATTCGTTAACCACAGCGTGGGGTTCTTACTTTGTTGAGTCTGGGCACAAAC
. : . : . : . : . : . :
JMFF034G09+ GGCTGCCCCCCATCTTGAATCGAACGATACAAAGGCAGCTGGAATGATACACTTCGGGTC
JMFF001F16+ GGCTGCCCCCCATCTTGAATCGAACGATACAAAGGCAGCTGGAATGATACACTTCGGGTC
JMFF025G20+ GGCTGCCCCCCATCTTGAATCGAACGATACAAAGGCAGCTGGAATGATACACTTCGGGTC
____________________________________________________________
consensus GGCTGCCCCCCATCTTGAATCGAACGATACAAAGGCAGCTGGAATGATACACTTCGGGTC
. : . : . : . : . : . :
JMFF034G09+ CTTAAGAATCTTCTCCCGCTCTATTGTCAACATTCTGTCAAACTCTTTAATCTGGCGTTT
JMFF001F16+ CTTAAGAATCTTCTCCCGCTCTATTGTCAACATTCTGTCAAACTCTTTAATCTGGCGTTT
JMFF025G20+ CTTAAGAATCTTCTCCCGCTCTATTGTCAACATTCTGTCAAACTCTTTAATCTGGCGTTT
____________________________________________________________
consensus CTTAAGAATCTTCTCCCGCTCTATTGTCAACATTCTGTCAAACTCTTTAATCTGGCGTTT
. : . : . : . : . : . :
JMFF034G09+ ATAGTACTCAACCGAATCGACTTTCTTGCCCCAAAGTCCAAGGAAGCCTGTCT
JMFF001F16+ ATAGTACTCAACCGAATCGACTTTCTTGCCCCAAAGTCCAAGGAAGCCTGTCTTACTGGT
JMFF025G20+ ATAGTACTCAACCGAATCGACTTTCTTGCCCCAAAGTCCAAGGAAGCCTGTCTTACTGGT
____________________________________________________________
consensus ATAGTACTCAACCGAATCGACTTTCTTGCCCCAAAGTCCAAGGAAGCCTGTCTTACTGGT
. : . : . : . : . : . :
JMFF001F16+ CGGCCTCTTGCCCGGATTTCTTTCGAGTTTAAGCTGGTTATAATCCAGCCAATTTTGAAG
JMFF025G20+ CGGCCTCTTGCCCGGATTTCTTTCGAGTTTAAGCTGGTTATAATCCAGCCAATTTTGAAG
____________________________________________________________
consensus CGGCCTCTTGCCCGGATTTCTTTCGAGTTTAAGCTGGTTATAATCCAGCCAATTTTGAAG