Contig 004559:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024N05Sequence412004559 (5)ref|XP_010031741.1|2e-38PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 705004559 (5)ref|XP_002516709.1|6e-96conserved hypothetical protein [Ricinus communis] gb|EEF45728.1| conserved hypot
JMFS024H11Sequence627004559 (5)ref|XP_010031741.1|2e-102PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1
JMSF038E07Sequence691004559 (5)gb|EYU46214.1|4e-102hypothetical protein MIMGU_mgv1a009835mg [Erythranthe guttata]937004559 (5)gb|KDP43637.1|2e-145hypothetical protein JCGZ_22951 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF024N05- ATCTCGTAAAAAGAAATAAGGGTGCAAGAGGTTCTTACTTGTGA
rJMSF038E07- AAGGGTGCAAGAGGTTCTTACTTGTGA
                      ____________________________________________________________
consensus ATCTCGTAAAAAGAAATAAGGGTGCAAGAGGTTCTTACTTGTGA
 
. : . : . : . : . : . :
rJMFF024N05- ATGTTAGAGTTCATACTAGCATCCACG-TTGTAAAACATCATAGTAACATCCTCTGCTTG
rJMSF038E07- ATGTTAGAGTTCATACTAGCATCCACGNTTGTAAAACATCATAGTAACATCCTCTGCTTG
                      ____________________________________________________________
consensus ATGTTAGAGTTCATACTAGCATCCACGNTTGTAAAACATCATAGTAACATCCTCTGCTTG
 
. : . : . : . : . : . :
rJMFF024N05- TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
rJMSF038E07- TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
                      ____________________________________________________________
consensus TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
 
. : . : . : . : . : . :
rJMFF024N05- ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
rJMSF038E07- ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
                      ____________________________________________________________
consensus ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
 
. : . : . : . : . : . :
rJMFF024N05- GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
rJMSF038E07- GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
                      ____________________________________________________________
consensus GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
 
. : . : . : . : . : . :
rJMFF024N05- TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
rJMSF038E07- TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
                      ____________________________________________________________
consensus TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
 
. : . : . : . : . : . :
rJMFF024N05- TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
rJMSF038E07- TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
                      ____________________________________________________________
consensus TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
 
. : . : . : . : . : . :
rJMFF024N05- ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
rJMSF038E07- ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
                      ____________________________________________________________
consensus ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
 
. : . : . : . : . : . :
rJMFF024N05- CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
rJMSF038E07- CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
                      ____________________________________________________________
consensus CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
 
. : . : . : . : . : . :
rJMFF024N05- CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
rJMSF038E07- CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
                      ____________________________________________________________
consensus CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
 
. : . : . : . : . : . :
rJMFF024N05- TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
rJMSF038E07- TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
JMFS024H11+ TTCCAAATACTCGAGAGTTCTTGGAATAT
JMSF038E07+ CTGATAAGCAGCAACACAAACCCCTTGAG-TTCCAAATACTCGAGAGTTCTTGGAATAT
                      ____________________________________________________________
consensus TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
 
. : . : . : . : . : . :
rJMFF024N05- CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
rJMSF038E07- CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
JMFS024H11+ CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
JMSF038E07+ CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
                      ____________________________________________________________
consensus CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
 
. : . : . : . : . : . :
rJMFF024N05- GG
rJMSF038E07- GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
JMFS024H11+ GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
JMSF038E07+ GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
                      ____________________________________________________________
consensus GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
 
. : . : . : . : . : . :
rJMSF038E07- TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
JMFS024H11+ TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
JMSF038E07+ TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
                      ____________________________________________________________
consensus TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
 
. : . : . : . : . : . :
rJMSF038E07- CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
JMFS024H11+ CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
JMSF038E07+ CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
                      ____________________________________________________________
consensus CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
 
. : . : . : . : . : . :
rJMSF038E07- TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAA
JMFS024H11+ TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
JMSF038E07+ TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
JMFF024N05+ AGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
                      ____________________________________________________________
consensus TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
 
. : . : . : . : . : . :
JMFS024H11+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
JMSF038E07+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
JMFF024N05+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
                      ____________________________________________________________
consensus CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
 
. : . : . : . : . : . :
JMFS024H11+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
JMSF038E07+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
JMFF024N05+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
                      ____________________________________________________________
consensus GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
 
. : . : . : . : . : . :
JMFS024H11+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
JMSF038E07+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
JMFF024N05+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
                      ____________________________________________________________
consensus GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
 
. : . : . : . : . : . :
JMFS024H11+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
JMSF038E07+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
JMFF024N05+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
                      ____________________________________________________________
consensus ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
 
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JMFS024H11+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAG
JMSF038E07+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
JMFF024N05+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
                      ____________________________________________________________
consensus GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
 
. : . : . : . : . : . :
JMSF038E07+ CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTC
JMFF024N05+ CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTCCTAGGCGTAGTATAAAACCTGGGGATTT
                      ____________________________________________________________
consensus CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTCCTAGGCGTAGTATAAAACCTGGGGATTT