| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024N05 | Sequence | 412 | 004559 (5) | ref|XP_010031741.1| | 2e-38 | PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 | 705 | 004559 (5) | ref|XP_002516709.1| | 6e-96 | conserved hypothetical protein [Ricinus communis] gb|EEF45728.1| conserved hypot |
| JMFS024H11 | Sequence | 627 | 004559 (5) | ref|XP_010031741.1| | 2e-102 | PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 | |||||
| JMSF038E07 | Sequence | 691 | 004559 (5) | gb|EYU46214.1| | 4e-102 | hypothetical protein MIMGU_mgv1a009835mg [Erythranthe guttata] | 937 | 004559 (5) | gb|KDP43637.1| | 2e-145 | hypothetical protein JCGZ_22951 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF024N05- ATCTCGTAAAAAGAAATAAGGGTGCAAGAGGTTCTTACTTGTGA
rJMSF038E07- AAGGGTGCAAGAGGTTCTTACTTGTGA
____________________________________________________________
consensus ATCTCGTAAAAAGAAATAAGGGTGCAAGAGGTTCTTACTTGTGA
. : . : . : . : . : . :
rJMFF024N05- ATGTTAGAGTTCATACTAGCATCCACG-TTGTAAAACATCATAGTAACATCCTCTGCTTG
rJMSF038E07- ATGTTAGAGTTCATACTAGCATCCACGNTTGTAAAACATCATAGTAACATCCTCTGCTTG
____________________________________________________________
consensus ATGTTAGAGTTCATACTAGCATCCACGNTTGTAAAACATCATAGTAACATCCTCTGCTTG
. : . : . : . : . : . :
rJMFF024N05- TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
rJMSF038E07- TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
____________________________________________________________
consensus TTCTGAATAAACGGCAAAGTTACATTATTTCACTAATGAAGACAAGACGGTAACAGTTGT
. : . : . : . : . : . :
rJMFF024N05- ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
rJMSF038E07- ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
____________________________________________________________
consensus ATGTAATATTGTAATGTGATCGATCATATAATCTGCGCCTATTTCAAGTATGACAGCGGA
. : . : . : . : . : . :
rJMFF024N05- GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
rJMSF038E07- GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
____________________________________________________________
consensus GCTGAGCTAGGCTAACAGCAATTTTAGCACCAATAAGAGCATTGTTTTTCACAAGTGCAA
. : . : . : . : . : . :
rJMFF024N05- TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
rJMSF038E07- TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
____________________________________________________________
consensus TATTAGAAGCTAGAGAAGCTCCTCCAGTTAATTCATTTACTCTAGCCAGCAGGAATGGGG
. : . : . : . : . : . :
rJMFF024N05- TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
rJMSF038E07- TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
____________________________________________________________
consensus TTTGAGCATTTCCTGTTATGTTTTTCTCCTCAGATTCTAGAAGAGCTCTTTGTATTGCAG
. : . : . : . : . : . :
rJMFF024N05- ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
rJMSF038E07- ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
____________________________________________________________
consensus ATTCAATTAAGCTTCCTGAAGCAGAATGTTCTTTTGGGATAGGGACTGCTATTATGATCC
. : . : . : . : . : . :
rJMFF024N05- CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
rJMSF038E07- CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
____________________________________________________________
consensus CAGTTTGAAGCCCAAGTTTAATGTTTGCATCAATTAGTCGAGCACAGTCTTCTGGCGTAT
. : . : . : . : . : . :
rJMFF024N05- CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
rJMSF038E07- CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
____________________________________________________________
consensus CTACCCGACAAGGTGCCTTGCAGCCGCTGGCTTCTGTAAAGAAAGCAGGAAATTCATTGG
. : . : . : . : . : . :
rJMFF024N05- TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
rJMSF038E07- TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
JMFS024H11+ TTCCAAATACTCGAGAGTTCTTGGAATAT
JMSF038E07+ CTGATAAGCAGCAACACAAACCCCTTGAG-TTCCAAATACTCGAGAGTTCTTGGAATAT
____________________________________________________________
consensus TCTGATAAGCAGCAACACAAACCCCTTGAGTTTCCAAATACTCGAGAGTTCTTGGAATAT
. : . : . : . : . : . :
rJMFF024N05- CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
rJMSF038E07- CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
JMFS024H11+ CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
JMSF038E07+ CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
____________________________________________________________
consensus CTAATATTGACTTCACACCAGCTGAGATTACAGTTACAGGAGTCCTTCCAAGCTCAGTAA
. : . : . : . : . : . :
rJMFF024N05- GG
rJMSF038E07- GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
JMFS024H11+ GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
JMSF038E07+ GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
____________________________________________________________
consensus GGTCAGAAGATACATCCATTGTATTCTCTCCATCTCTATGCACTCCTCCAACACCACCAG
. : . : . : . : . : . :
rJMSF038E07- TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
JMFS024H11+ TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
JMSF038E07+ TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
____________________________________________________________
consensus TTACAAATATAGGAATCCCAGCCATAGAAGCAAAAAACATTGTTGCAGAAACAGTAGTTG
. : . : . : . : . : . :
rJMSF038E07- CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
JMFS024H11+ CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
JMSF038E07+ CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
____________________________________________________________
consensus CACCATTTCCTTTAGTAGCCACAACATGTGCAATATCTCTACGAGCGGTCTTTCGAGCTT
. : . : . : . : . : . :
rJMSF038E07- TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAA
JMFS024H11+ TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
JMSF038E07+ TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
JMFF024N05+ AGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
____________________________________________________________
consensus TGCTTCCTAGGATTGCCAGCCTCTCCAATTCTTCCATACTCAAACCTATGCACGGTATGC
. : . : . : . : . : . :
JMFS024H11+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
JMSF038E07+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
JMFF024N05+ CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
____________________________________________________________
consensus CATCCAAAATAGCAATAGTGGCAGGTTCAGCTCCATTGGAACTCACAATTTCCTCCACCT
. : . : . : . : . : . :
JMFS024H11+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
JMSF038E07+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
JMFF024N05+ GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
____________________________________________________________
consensus GTTTTGCTGTTTCCAGATTTTGAGGATAAGGCATTCCATGAGAGATAATGGTAGATTCAA
. : . : . : . : . : . :
JMFS024H11+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
JMSF038E07+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
JMFF024N05+ GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
____________________________________________________________
consensus GTGCAACAACTGGTCGTCCATGTGCTAATGCTTCAGAAACTTTAGGGGATATCTTAATCA
. : . : . : . : . : . :
JMFS024H11+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
JMSF038E07+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
JMFF024N05+ ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
____________________________________________________________
consensus ACCCCTCATAACAACCCTTGACTAGAGTCGAACTAGTTAAGTGCCTCTGGATGATTGCTA
. : . : . : . : . : . :
JMFS024H11+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAG
JMSF038E07+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
JMFF024N05+ GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
____________________________________________________________
consensus GCCTGGACACAGCCGGAGACTCCATTTTGAGAGATAACTGATAACTCGTCGAGCGATTCG
. : . : . : . : . : . :
JMSF038E07+ CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTC
JMFF024N05+ CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTCCTAGGCGTAGTATAAAACCTGGGGATTT
____________________________________________________________
consensus CCGGCGCCGGTGGAGGAGAAAAGACGGAAGTCCTAGGCGTAGTATAAAACCTGGGGATTT