Contig 004557:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P01Sequence591004557 (6)ref|XP_006363008.1|2e-48PREDICTED: endoplasmin homolog [Solanum tuberosum]674001055 (5)ref|XP_009798975.1|5e-58PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF012H16Sequence592004557 (6)ref|XP_006363008.1|1e-47PREDICTED: endoplasmin homolog [Solanum tuberosum]791001055 (5)ref|XP_009798975.1|6e-83PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF016I08Sequence594004557 (6)ref|XP_006363008.1|2e-48PREDICTED: endoplasmin homolog [Solanum tuberosum]676001055 (5)ref|XP_009798975.1|1e-58PREDICTED: heat shock protein 83 [Nicotiana sylvestris]
JMFF024K13Sequence474004557 (6)ref|XP_006363008.1|2e-09PREDICTED: endoplasmin homolog [Solanum tuberosum]607001055 (5)ref|XP_009605137.1|3e-35PREDICTED: heat shock protein 83 [Nicotiana tomentosiformis]
JMFS063B02Sequence615004557 (6)ref|XP_006363008.1|2e-49PREDICTED: endoplasmin homolog [Solanum tuberosum]
JMSF028E02Sequence666004557 (6)ref|XP_006363008.1|3e-56PREDICTED: endoplasmin homolog [Solanum tuberosum]735001055 (5)ref|XP_009798975.1|2e-80PREDICTED: heat shock protein 83 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF028E02+                                                  TGAGCAATAGTACCAAGGCAG
                      ____________________________________________________________
consensus                                                    TGAGCAATAGTACCAAGGCAG
 
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JMFF010P01+                          CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMFF012H16+                          CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMFF016I08+                          CGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
JMSF028E02+           TCAACAAGTTCCTGGCGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
                      ____________________________________________________________
consensus             TCAACAAGTTCCTGGCGAGTCATACCAATTCCAGTGTCTGTGATTGTTATTATGCCATTA
 
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JMFF010P01+           TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFF012H16+           TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFF016I08+           TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMSF028E02+           TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
JMFS063B02+                ATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
                      ____________________________________________________________
consensus             TCTTTATCAGTCTGTATACGGATGTCAAGATCAACTCCATCCTTCAAAAGATCGGGCTCT
 
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JMFF010P01+           GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFF012H16+           GTAACACCAAGAAACCTCAAGNTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFF016I08+           GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMSF028E02+           GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
JMFS063B02+           GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
                      ____________________________________________________________
consensus             GTAACACCAAGAAACCTCAACTTATCCAGGGCATCACTTGCATTGCTGATTAGCTCCCTA
 
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JMFF010P01+           AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFF012H16+           AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFF016I08+           AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMSF028E02+           AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
JMFS063B02+           AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
                      ____________________________________________________________
consensus             AGAAACACTTCTTTATTGCTGTACAAGCTGTTAACAATTAGATCCATCAGACGACTAACC
 
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JMFF010P01+           TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF012H16+           TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF016I08+           TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMSF028E02+           TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFS063B02+           TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
JMFF024K13+                 TGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
                      ____________________________________________________________
consensus             TCTGCCTGATATTCATACTTCTCAGCCACAGCTCCTTGTTTATCAGATGCTGCATATGTT
 
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JMFF010P01+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF012H16+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF016I08+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMSF028E02+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFS063B02+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
JMFF024K13+           GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
                      ____________________________________________________________
consensus             GACTCATGTCGGCTTCCAAGAAACAGCTCTCCTCTTGCATTAAATGGTTTTACTGTTCTC
 
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JMFF010P01+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF012H16+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF016I08+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMSF028E02+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFS063B02+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
JMFF024K13+           ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
                      ____________________________________________________________
consensus             ATGCTACTGTGCCTTTCCAAAGCAAAAGCTGAATAACATCTGACTTTGGCATCATTCTCA
 
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JMFF010P01+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF012H16+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF016I08+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMSF028E02+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFS063B02+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
JMFF024K13+           CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
                      ____________________________________________________________
consensus             CCAGCCGGTTGGTTGAGGAGACCGGAGGATGAAATCGGAGCAGCTGCATTCCGGTAACGT
 
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JMFF010P01+           GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF012H16+           GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF016I08+           GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMSF028E02+           GAACCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFS063B02+           GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
JMFF024K13+           GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
                      ____________________________________________________________
consensus             GAGCCGCCAGCGCGCAGAGCAGCGGAGAGAGAACGCCTGGAGAGCCTGTGCATACTTTCT
 
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JMFF010P01+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF012H16+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF016I08+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMSF028E02+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFS063B02+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
JMFF024K13+           TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
                      ____________________________________________________________
consensus             TCAAGCAGAAACGAGGTAAAAGTAAGTAGAAATGTGGAAATGAGGAGAAGGCGATCAGGT
 
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JMFF010P01+           GGGT                                                        
JMFF012H16+           GGGT                                                        
JMFF016I08+           GGGT                                                        
JMSF028E02+           GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTT                
JMFS063B02+           GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
JMFF024K13+           GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
                      ____________________________________________________________
consensus             GGGTGCGTGAAGAGAGTGATGAAGGAAGGATGAATGTGGCGGTTAAGTACTGGTAGGGTT
 
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JMFS063B02+           TTAGGCGAGGTTTAAGCGTT                                        
JMFF024K13+           TTAGGCGAGGTTTAAGCGTTTAACGAAGCTTCTGGAGATGGGTCATAGTCTGCGTTTCAT
                      ____________________________________________________________
consensus             TTAGGCGAGGTTTAAGCGTTTAACGAAGCTTCTGGAGATGGGTCATAGTCTGCGTTTCAT