Contig 004556:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN035L18+                                CAATGAATGAATTAATGCATGGTAATAACAAAGAGAGAA
rJMFF024H06-                                 ATGAATGAATTAATGCATGGTAATAACAAAGAGAGAA
                      ____________________________________________________________
consensus                                  CAATGAATGAATTAATGCATGGTAATAACAAAGAGAGAA
 
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JMFN035L18+           GAGCTAAAATCAATGGCCTACTCTAACTCTCTGTACATGAAGAATTTGGTAACTATAATA
rJMFF024H06-          GAGCTAAAATCAATGGCCTACTCTAACTCTCTGTACATGAAGAATTTGGTAACTATAATA
                      ____________________________________________________________
consensus             GAGCTAAAATCAATGGCCTACTCTAACTCTCTGTACATGAAGAATTTGGTAACTATAATA
 
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JMFN035L18+           ATATTTTGAAATTGAATTAGGCGGTTTCTGGGAAGGATAAGCGCGGTTTCTTTGCCGGCA
rJMFF024H06-          ATATTTTGAAATTGAATTAGGCGGTTTCTGGGAAGGATAAGCGCGGTTTCTTTGCCGGCA
                      ____________________________________________________________
consensus             ATATTTTGAAATTGAATTAGGCGGTTTCTGGGAAGGATAAGCGCGGTTTCTTTGCCGGCA
 
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JMFN035L18+           TCGGACTTTCTACTTCATGGTCGCCGGTAGTTGGTTGACTTGGCTGGCCGCAGTCGATGC
rJMFF024H06-          TCGGACTTTCTACTTCATGGTCGCCGGTAGTTGGTTGACTTGGCTGGCCGCAGTCGATGC
                      ____________________________________________________________
consensus             TCGGACTTTCTACTTCATGGTCGCCGGTAGTTGGTTGACTTGGCTGGCCGCAGTCGATGC
 
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JMFN035L18+           TCAGGCGAAGGTCTAGCTCCGGTGAGGGTGGGAGCTCGTTGAGGTCGAATTCCAGGGGTG
rJMFF024H06-          TCAGGCGAAGGTCTAGCTCCGGTGAGGGTGGGAGCTCGTTGAGGTCGAATTCCAGGGGTG
                      ____________________________________________________________
consensus             TCAGGCGAAGGTCTAGCTCCGGTGAGGGTGGGAGCTCGTTGAGGTCGAATTCCAGGGGTG
 
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JMFN035L18+           TGCGGCTCGAGATAACGGCGCCATCGGAGGATGTGCCGCTGCGGCTGCCGCCGCCGCCCA
rJMFF024H06-          TGCGGCTCGAGATAACGGCGCCATCGGAGGATGTGCCGCTGCGGCTGCCGCCGCCGCCCA
                      ____________________________________________________________
consensus             TGCGGCTCGAGATAACGGCGCCATCGGAGGATGTGCCGCTGCGGCTGCCGCCGCCGCCCA
 
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JMFN035L18+           GTTTGCCTTCGTAGTGGCGGCGCTTGTGGCCGCCCAGAGCCTGGCCTGTCGGGAAGGATT
rJMFF024H06-          GTTTGCCTTCGTAGTGGCGGCGCTTGTGGCCGCCCAGAGCCTGGCCTGTCGGGAAGGATT
JMFS053C07+                                                   CTGGCCTGTCGGGAAGGATN
                      ____________________________________________________________
consensus             GTTTGCCTTCGTAGTGGCGGCGCTTGTGGCCGCCCAGAGCCTGGCCTGTCGGGAAGGATT
 
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JMFN035L18+           TGTGGCAGATGGAGCACTCGTGGGGCTTGCCGCTGGGGATCAGAGCACCCGCCGCCGTGA
rJMFF024H06-          TGTGGCAGATGGAGCACTCGTGGGGCTTGCCGCTGGGGATCAGAGCACCCGCCGCCGTGA
JMFS053C07+           TGTGGCAGATGGAGCACTCGTGGGGCTTGCCGCTGGGGATCAGAGCACCCGCCGCCGTGA
                      ____________________________________________________________
consensus             TGTGGCAGATGGAGCACTCGTGGGGCTTGCCGCTGGGGATCAGAGCACCCGCCGCCGTGA
 
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JMFN035L18+           CGGAGGTTGACGTGGA                                            
rJMFF024H06-          CGGAGGTTGACGTGGAAGGGGTGGTTGTCTTCCGCGGCGGCGGCGGTGGCGTATTTACGG
JMFS053C07+           CGGAGGTTGACGTGG-AGGGGTGGTTGTCTTCCGCGGCGGCGGCGGTGGCGTATTTACGG
                      ____________________________________________________________
consensus             CGGAGGTTGACGTGGAAGGGGTGGTTGTCTTCCGCGGCGGCGGCGGTGGCGTATTTACGG
 
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rJMFF024H06-          TGGCTGGCTTTGTGCCCACCAAGTGCTTGATAANATGCNAACGCCTTGTCNCACACNCTA
JMFS053C07+           TGGCTGGCTTTGTGCCCACCAAGTGCTTGATAAGATGCGAACGCCTTGTCGCACACGCTA
                      ____________________________________________________________
consensus             TGGCTGGCTTTGTGCCCACCAAGTGCTTGATAAGATGCGAACGCCTTGTCGCACACGCTA
 
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rJMFF024H06-          CACTTGTATTCTTGAACGGNTTCTTGCACCNACTTC                        
JMFS053C07+           CACTTGTATTCTTGAACGGTTTCTTGCACCGACTTCGGCGGCGACGGCGGCGGAGGATGC
JMFF024H06+                               TTCTTGCACCGACTTCGGCGGCGACGGCGGCGGAGGATGC
                      ____________________________________________________________
consensus             CACTTGTATTCTTGAACGGTTTCTTGCACCGACTTCGGCGGCGACGGCGGCGGAGGATGC
 
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JMFS053C07+           GGAGTAGCCTCCTCACTTTCCTTCTCCGCTTCCCCGGCGGCCTCCTCAGCCACGATCCTC
JMFF024H06+           GGAGTAGCCTCCTCACTTTCCTTCTCCGCTTCCCCGGCGGCCTCCTCAGCCACGATCCTC
                      ____________________________________________________________
consensus             GGAGTAGCCTCCTCACTTTCCTTCTCCGCTTCCCCGGCGGCCTCCTCAGCCACGATCCTC
 
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JMFS053C07+           CTCCGCGGCTCCTCCCCCCTAGCAAGCATAACAAGACACATCGCCAGATACTCCTCTTCA
JMFF024H06+           CTCCGCGGCTCCTCCCCCCTAGCAAGCATAACAAGACACATCGCCAGATACTCCTCTTCA
                      ____________________________________________________________
consensus             CTCCGCGGCTCCTCCCCCCTAGCAAGCATAACAAGACACATCGCCAGATACTCCTCTTCA
 
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JMFS053C07+           CTTTGCGACGGCTGCGGGCTCTCAGTGCGGGGGCGCTTAGACGACCGCCTCTTCTTGAAA
JMFF024H06+           CTTTGCGACGGCTGCGGGCTCTCAGTGCGGGGGCGCTTAGACGACCGCCTCTTCTTGAAA
                      ____________________________________________________________
consensus             CTTTGCGACGGCTGCGGGCTCTCAGTGCGGGGGCGCTTAGACGACCGCCTCTTCTTGAAA
 
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JMFS053C07+           CTGTGAAAATCAACCTCCCCAAGCGGCGGCGGCGGCATCTTCGGCGCCACCGCTGCCGCC
JMFF024H06+           CTGTGAAAATCAACCTCCCCAAGCGGCGGCGGCGGCATCTTCGGCGCCACCGCTGCCGCC
                      ____________________________________________________________
consensus             CTGTGAAAATCAACCTCCCCAAGCGGCGGCGGCGGCATCTTCGGCGCCACCGCTGCCGCC
 
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JMFS053C07+           GCTTTCAGAGCCTCCAAGGCCATCCCACAATTCGGAAAGTAACGCTAGAAAACAACTCAA
JMFF024H06+           GCTTTCAGAGCCTCCAAGGCCATCCCACAATTCGGAAAGTAACGCTAGAAAACAACTCAA
                      ____________________________________________________________
consensus             GCTTTCAGAGCCTCCAAGGCCATCCCACAATTCGGAAAGTAACGCTAGAAAACAACTCAA
 
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JMFS053C07+           GAGAGAGAGAGAGAGAGAGAGAGAAAGAGACTAAAGCAAG                    
JMFF024H06+           GAGAGAGAGAGAGAGAGAGAGAGAAAGAGACTAAAGCAAGAGAGGAAAGGGAGTTTGAGT
                      ____________________________________________________________
consensus             GAGAGAGAGAGAGAGAGAGAGAGAAAGAGACTAAAGCAAGAGAGGAAAGGGAGTTTGAGT