Contig 004555:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I23Sequence493004555 (9)ref|XP_006343543.1|2e-49PREDICTED: xylose isomerase-like [Solanum tuberosum]704009826 (7)gb|EYU42442.1|1e-106hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMFF024G21Sequence462004555 (9)ref|XP_006343543.1|6e-41PREDICTED: xylose isomerase-like [Solanum tuberosum]825009826 (7)ref|XP_006343543.1|1e-107PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMFF047G23Sequence422004555 (9)ref|XP_006343543.1|8e-33PREDICTED: xylose isomerase-like [Solanum tuberosum]383009826 (7)ref|XP_006343543.1|5e-22PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMFS007H09Sequence556004555 (9)ref|XP_006343543.1|2e-101PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMSF005J03Sequence258004555 (9)ref|XP_006343543.1|2e-21PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMSF013D20Sequence440004555 (9)ref|XP_006343543.1|3e-61PREDICTED: xylose isomerase-like [Solanum tuberosum]785009826 (7)ref|XP_006343543.1|3e-111PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMSF015D02Sequence407004555 (9)ref|XP_006343543.1|1e-55PREDICTED: xylose isomerase-like [Solanum tuberosum]736009826 (7)gb|EYU42442.1|2e-128hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMSF034L06Sequence626004555 (9)ref|XP_006343543.1|5e-104PREDICTED: xylose isomerase-like [Solanum tuberosum]721009826 (7)gb|EYU42442.1|3e-128hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMSF044I14Sequence800004555 (9)ref|XP_006343543.1|5e-103PREDICTED: xylose isomerase-like [Solanum tuberosum]752009826 (7)gb|EYU42442.1|5e-134hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU

Alignment

This contig is upended


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JMSF044I14+            CCACCCCAGAAAACATAATTCTCACCACCAAGGTAATGTGTAACCTCCATAGCCTTCTT
                      ____________________________________________________________
consensus              CCACCCCAGAAAACATAATTCTCACCACCAAGGTAATGTGTAACCTCCATAGCCTTCTT
 
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JMSF044I14+           GACTTGTGCTGCAGCGTAGACATATACTCCTAATTCAGAGCTAGTTGCACCACCATGCAT
                      ____________________________________________________________
consensus             GACTTGTGCTGCAGCGTAGACATATACTCCTAATTCAGAGCTAGTTGCACCACCATGCAT
 
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JMSF034L06+                                                                   CCTG
JMSF044I14+           GTATCGTGGATGCACAAACAACTGACTTGTACCCCATAAAGGCCGGATCTTTGAACCCTG
                      ____________________________________________________________
consensus             GTATCGTGGATGCACAAACAACTGACTTGTACCCCATAAAGGCCGGATCTTTGAACCCTG
 
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JMFS007H09+                  TTAGCAAGTGCTACCACTTCGTCCAAGTTTGCATTGGCCTCCTCTAGTGTTTT
JMSF034L06+           AAGCTCTTTAGCAAGTGCTACCACTTCGTCCAAGTTTGCATTGGCCTCCTCTAGTGTTTT
JMSF044I14+           AAGCTCTTTAGCAAGTGCTACCACTTCGTCCAAGTTTGCATTGGCCTCCTCTAGTGTTTT
                      ____________________________________________________________
consensus             AAGCTCTTTAGCAAGTGCTACCACTTCGTCCAAGTTTGCATTGGCCTCCTCTAGTGTTTT
 
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JMFS007H09+           GCCGTCAGGAGCAATGTCTCTGTCGTGAAAGCACCACAGAGACACTCCAAGCTTGTCTAG
JMSF034L06+           GCCGTCAGGAGCAATGTCTCTGTCGTGAAAGCACCACAGAGACACTCCAAGCTTGTCTAG
JMSF044I14+           GCCGTCAGGAGCAATGTCTCTGTCGTGAAAGCACCACAGAGACACTCCAAGCTTGTCTAG
                      ____________________________________________________________
consensus             GCCGTCAGGAGCAATGTCTCTGTCGTGAAAGCACCACAGAGACACTCCAAGCTTGTCTAG
 
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JMFS007H09+           TAACTCAAAGTTTGCTCTCATCCTCCTCTTAGCCATCGCCAGGGAGTTAGTGCCATCTTC
JMSF013D20+                                                                      C
JMSF034L06+           TAACTCAAAGTTTGCTCTCATCCTCCTCTTAGCCATCGCCAGGGAGTTAGTGCCATCTTC
JMSF044I14+           TAACTCAAAGTTTGCTCTCATCCTCCTCTTAGCCATCGCCAGGGAGTTAGTGCCATCTTC
                      ____________________________________________________________
consensus             TAACTCAAAGTTTGCTCTCATCCTCCTCTTAGCCATCGCCAGGGAGTTAGTGCCATCTTC
 
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JMFS007H09+           CCATGGCCATAATTTCGTAGGTGCACCAAATGGATCAGAACCTGTGCCACGGAATGTATG
JMSF013D20+           CCATGGCCATAATTTNGTAGGTGCACCAAATGGATCAGAACCTGTGCCACGGAATGTATG
JMSF015D02+                                 GCACCAAATGGATCAGAACCTGTGCCACGGAATGTATG
JMSF034L06+           CCATGGCCATAATTTCGTAGGTGCACCAAATGGATCAGAACCTGTGCCACGGAATGTATG
JMSF044I14+           CCATGGCCATAATTTCGTAGGTGCACCAAATGGATCAGAACC--TGCCACGGAATGTATG
JMFF015I23+                                                          CACGGAATGTATG
                      ____________________________________________________________
consensus             CCATGGCCATAATTTCGTAGGTGCACCAAATGGATCAGAACCTGTGCCACGGAATGTATG
 
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JMFS007H09+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMSF013D20+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMSF015D02+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMSF034L06+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMSF044I14+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMFF015I23+           CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
JMFF047G23+                                                                     TC
JMFF024G21+                             CCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
                      ____________________________________________________________
consensus             CCAAAATGCAACACTAAACCTCATCCAATCCTTCATCTTTTTCCCAAGAATCTCCTCCTC
 
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JMFS007H09+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMSF013D20+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMSF015D02+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMSF034L06+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMSF005J03+                                                       CCTCATATTTAATCTT
JMSF044I14+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMFF015I23+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
JMFF047G23+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATNTAATCTT
JMFF024G21+           AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
                      ____________________________________________________________
consensus             AGCGTTGTACCATTTAAAAGACAGTGGGTTCTTACTAGAAGGACCCTCATATTTAATCTT
 
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JMFS007H09+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMSF013D20+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMSF015D02+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMSF034L06+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMSF005J03+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMSF044I14+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMFF015I23+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMFF047G23+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
JMFF024G21+           GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
                      ____________________________________________________________
consensus             GGGAATTCCAGGGAAGAATTCACCTTCCCATTCACCTGAGCCACTTGCACAATCACTATT
 
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JMFS007H09+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMSF013D20+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMSF015D02+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMSF034L06+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMSF005J03+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMSF044I14+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMFF015I23+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMFF047G23+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
JMFF024G21+           AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
                      ____________________________________________________________
consensus             AATATCTGCAGGGCATGTTGGTGGACCAGCAGCCATCACTATATTTGAGATCACATTCAA
 
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JMFS007H09+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMSF013D20+           GCAAAAAAGGAGAAACAAGACCCTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMSF015D02+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMSF034L06+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMSF005J03+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMSF044I14+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMFF015I23+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMFF047G23+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
JMFF024G21+           GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
                      ____________________________________________________________
consensus             GCAAAAAAGGAGAAACAAGACCTTCCCAGCCATCATGTCTATCATCAACCGAGAGTGGGA
 
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JMFS007H09+           TAGAGATTCAGTCCACTTCCAGA                                     
JMSF013D20+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMSF015D02+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMSF034L06+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMSF005J03+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCT                      
JMSF044I14+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMFF015I23+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMFF047G23+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
JMFF024G21+           TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
                      ____________________________________________________________
consensus             TAGAGATTCAGTCCACTTCCAGATAGAGACGTATCTCTGCTATTCAGGAAGAATAGTTCA
 
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JMSF013D20+           ACACAACCTCTGCTCAGC                                          
JMSF015D02+           ACACAACC                                                    
JMSF034L06+           ACACAACCTCTGCTCAGC                                          
JMSF044I14+           ACACAACCTCTGCTCAGCACC                                       
JMFF015I23+           ACACAACCTCTGCTCAGCACCACAACGATCTCAACAGAAGCTATATATAATAGGAGGATT
JMFF047G23+           ACTCAACCTCTGCTCAGCACCACAACGATCTCAACAGAAGCTATATATAATAGGAGGATT
JMFF024G21+           ACACAACCTCTGCTCAGCACCACAACGATCTCAACAGAAGCTATATATAATAGGAGGATT
                      ____________________________________________________________
consensus             ACACAACCTCTGCTCAGCACCACAACGATCTCAACAGAAGCTATATATAATAGGAGGATT
 
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JMFF015I23+           GGAAAACAAAGGTAAAACGTTTGGGAATTGGGTTTCGCTTTCGGATTATGTTGTACGTAC
JMFF047G23+           GGAAAACAAAGGTAAAACGTTTGGGAATTGGGTTTCGCTTTCGGATTATGTTGTACGTAC
JMFF024G21+           GGAAAACAAAGGTAAAACGTTTGGGAATTGGGTTTCGCTTTCGGATTATGTTGTACGTAC
                      ____________________________________________________________
consensus             GGAAAACAAAGGTAAAACGTTTGGGAATTGGGTTTCGCTTTCGGATTATGTTGTACGTAC