Contig 004554:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017I16Sequence407004554 (3)ref|XP_009628969.1|5e-53PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 8-like [Nicotiana tom730002565 (2)ref|XP_002273502.1|8e-47PREDICTED: GATA transcription factor 8-like [Vitis vinifera]
JMFF024A05Sequence566004554 (3)ref|XP_009628969.1|5e-56PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 8-like [Nicotiana tom712002565 (2)ref|XP_007009854.1|3e-48Plant-specific GATA-type zinc finger transcription factor family protein isofor
JMFS093C05Sequence618004554 (3)emb|CDO99748.1|6e-80unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS093C05+                              TCGGACTCTGATGAGACTGCAGGAGCAACAAAGGGCTGTGG
                      ____________________________________________________________
consensus                                TCGGACTCTGATGAGACTGCAGGAGCAACAAAGGGCTGTGG
 
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JMFS093C05+           AGCCTCGGTGAAGGACGATGTGGGAGAGATGAGTTGAATCGCTGGCCTCGGGTTGAAAGT
                      ____________________________________________________________
consensus             AGCCTCGGTGAAGGACGATGTGGGAGAGATGAGTTGAATCGCTGGCCTCGGGTTGAAAGT
 
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JMFS093C05+           TGCGGGGCGAGGGCGCTTGCTCCTAGCTCGCTGCACACCACAACGACTCGGGCTAAGCGG
                      ____________________________________________________________
consensus             TGCGGGGCGAGGGCGCTTGCTCCTAGCTCGCTGCACACCACAACGACTCGGGCTAAGCGG
 
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JMFS093C05+           GATAGTCGTCTTCCCTCCCGAGCACGAGGACGAGCTGCTGCTGCTGCTGCTACTTTCAAG
                      ____________________________________________________________
consensus             GATAGTCGTCTTCCCTCCCGAGCACGAGGACGAGCTGCTGCTGCTGCTGCTACTTTCAAG
 
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JMFS093C05+           AACCGAGACCGGACTCGAGGTCTGGAACTTGTTGTGAGGTGGCTCCACGTTCACAGGAGT
                      ____________________________________________________________
consensus             AACCGAGACCGGACTCGAGGTCTGGAACTTGTTGTGAGGTGGCTCCACGTTCACAGGAGT
 
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JMFS093C05+           GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
JMFF017I16+           GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
JMFF024A05+           GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
                      ____________________________________________________________
consensus             GTTCTCTTTCCCGAGAGTCATCCCTCCACCCGAGAACGAATCCTCCACGAACGTCGAAAG
 
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JMFS093C05+           CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
JMFF017I16+           CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
JMFF024A05+           CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
                      ____________________________________________________________
consensus             CCATTCGAGCTGGATAATGTCCTCATACGGCACTGAGAGCTCCGCCGACAGGTCAGCTGC
 
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JMFS093C05+           CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTACAAAT
JMFF017I16+           CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
JMFF024A05+           CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
                      ____________________________________________________________
consensus             CGAGTTGTTGTGGCTGCCGGAGAAAAGGGGCTCGGAATCCGGCAAGGGGTCGTTCCAAAT
 
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JMFS093C05+           GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
JMFF017I16+           GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
JMFF024A05+           GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
                      ____________________________________________________________
consensus             GCTGGGAAAATTCTTGAACTCGCCGGAACCGACACCGCCGACACACTCATTCTCCGGTGG
 
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JMFS093C05+           GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCGATGAA
JMFF017I16+           GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
JMFF024A05+           GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
                      ____________________________________________________________
consensus             GAATTCAATCAAGTCGTCAATGTGATCAAAGAAGCTACCGCAGTCTAATTCATCCATGAA
 
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JMFS093C05+           ATTTGA                                                      
JMFF017I16+           ATTTGA                                                      
JMFF024A05+           ATTTGACCCCATGCTACCTTGAAGAGTGGTTGAGGAGCTTAGCGGCACAAGGGAAGGAGA
                      ____________________________________________________________
consensus             ATTTGACCCCATGCTACCTTGAAGAGTGGTTGAGGAGCTTAGCGGCACAAGGGAAGGAGA
 
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JMFF024A05+           AGAAGAAGCTATGGGAGAAGTGAAGGAGAATAGGGAGAGCAGAAGAAAGCTAAAAAGGGG
                      ____________________________________________________________
consensus             AGAAGAAGCTATGGGAGAAGTGAAGGAGAATAGGGAGAGCAGAAGAAAGCTAAAAAGGGG
 
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JMFF024A05+           AAAGAGAGAATGGGGTACGGTAGGTGAAGCTCTTGCCTCACTGCTAGCTGTATGTATTTC
                      ____________________________________________________________
consensus             AAAGAGAGAATGGGGTACGGTAGGTGAAGCTCTTGCCTCACTGCTAGCTGTATGTATTTC