| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019K17 | Sequence | 627 | 004553 (12) | gb|EEC75802.1| | 2e-66 | hypothetical protein OsI_12739 [Oryza sativa Indica Group] | 721 | 001247 (12) | emb|CDP08535.1| | 7e-53 | unnamed protein product [Coffea canephora] |
| JMFF023L21 | Sequence | 354 | 004553 (12) | ref|XP_007162462.1| | 2e-04 | hypothetical protein PHAVU_001G154300g [Phaseolus vulgaris] gb|ESW34456.1| hypot | 756 | 001247 (12) | emb|CDP08535.1| | 1e-44 | unnamed protein product [Coffea canephora] |
| JMFF029N06 | Sequence | 584 | 004553 (12) | ref|XP_006347767.1| | 6e-57 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X1 [Solanum tubero | 743 | 001247 (12) | ref|XP_006347767.1| | 2e-55 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X1 [Solanum tubero |
| JMFF051C02 | Sequence | 529 | 004553 (12) | ref|XP_009610020.1| | 129 | PREDICTED: serine/threonine-protein kinase Nek2 [Nicotiana tomentosiformis] ref| | 528 | 001247 (12) | emb|CDP08535.1| | 3e-18 | unnamed protein product [Coffea canephora] |
| JMFS088A12 | Sequence | 613 | 004553 (12) | emb|CBI34192.3| | 1e-67 | unnamed protein product [Vitis vinifera] | |||||
| JMSF006N22 | Sequence | 280 | 004553 (12) | 408 | 001247 (12) | emb|CDP08535.1| | 3e-26 | unnamed protein product [Coffea canephora] | |||
| JMSF022B04 | Sequence | 653 | 004553 (12) | ref|XP_009771106.1| | 8e-93 | PREDICTED: serine/threonine-protein kinase Nek2 isoform X1 [Nicotiana sylvestri | 780 | 001247 (12) | ref|XP_006347767.1| | 1e-56 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X1 [Solanum tubero |
| JMSF022C04 | Sequence | 685 | 004553 (12) | gb|AIS71906.1| | 3e-101 | LSTK-1-like kinase [Nicotiana tabacum] | 761 | 001247 (12) | ref|XP_009771142.1| | 2e-52 | PREDICTED: serine/threonine-protein kinase Nek1 isoform X3 [Nicotiana sylvestri |
| JMSF026J21 | Sequence | 570 | 004553 (12) | ref|XP_006347767.1| | 1e-50 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X1 [Solanum tubero | 664 | 001247 (12) | ref|XP_009771142.1| | 8e-60 | PREDICTED: serine/threonine-protein kinase Nek1 isoform X3 [Nicotiana sylvestri |
| JMSF027C07 | Sequence | 655 | 004553 (12) | gb|AIS71906.1| | 7e-77 | LSTK-1-like kinase [Nicotiana tabacum] | 773 | 001247 (12) | ref|XP_006347767.1| | 6e-55 | PREDICTED: serine/threonine-protein kinase Nek1-like isoform X1 [Solanum tubero |
| JMSF035M14 | Sequence | 663 | 004553 (12) | ref|XP_009771106.1| | 2e-76 | PREDICTED: serine/threonine-protein kinase Nek2 isoform X1 [Nicotiana sylvestri | 671 | 001247 (12) | ref|XP_009771142.1| | 5e-61 | PREDICTED: serine/threonine-protein kinase Nek1 isoform X3 [Nicotiana sylvestri |
| JMSF047G21 | Sequence | 673 | 004553 (12) | ref|XP_009771106.1| | 4e-68 | PREDICTED: serine/threonine-protein kinase Nek2 isoform X1 [Nicotiana sylvestri | 786 | 001247 (12) | ref|XP_009771142.1| | 5e-74 | PREDICTED: serine/threonine-protein kinase Nek1 isoform X3 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMSF022C04+ TCAGGGCACATATAACTGGGAGTTC
____________________________________________________________
consensus TCAGGGCACATATAACTGGGAGTTC
. : . : . : . : . : . :
JMSF022B04+ AGAGGAAGCAAGTTCATCAGAACTCAACATCTTGGCAAGTCCAAAATCACCAA
JMSF022C04+ CAACAATAGAGGAAGCAAGTTCATCAGAACTCAACATCTTGGCAAGTCCAAAATCACCAA
____________________________________________________________
consensus CAACAATAGAGGAAGCAAGTTCATCAGAACTCAACATCTTGGCAAGTCCAAAATCACCAA
. : . : . : . : . : . :
JMSF022B04+ GACGAATGTCTTGGTCTTTGGTTAGAAAAATATTTGAACACTTGACATCTCGATGAAGGA
JMSF022C04+ GACGAATGTCTTGGTCTTTGGTTAGAAAAATATTTGAACACTTGACATCTCGATGAAGGA
JMFS088A12+ CGATGAAGGA
JMFF019K17+ GAAGGA
JMSF027C07+ TGGTTAGAAAAATATTTGAACACTTGACATCTCGATGAAGGA
JMSF035M14+ TGGTTAGAAAAATATTTGAACACTTGACATCTCGATGAAGGA
JMSF047G21+ TCTCGATGAAGGA
____________________________________________________________
consensus GACGAATGTCTTGGTCTTTGGTTAGAAAAATATTTGAACACTTGACATCTCGATGAAGGA
. : . : . : . : . : . :
JMSF022B04+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMSF022C04+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMFS088A12+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMFF029N06+ TTGAACAAGCCACCTGCATAGCT
JMFF019K17+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMSF027C07+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMSF035M14+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
JMSF026J21+ TGCATAGCT
JMSF047G21+ TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
____________________________________________________________
consensus TATGATTCATGTGTAAGTAATCAAGAGCCATTAAAAGTTGAACAAGCCACCTGCATAGCT
. : . : . : . : . : . :
JMSF022B04+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMSF022C04+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMFS088A12+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMFF029N06+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMFF019K17+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMSF027C07+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMSF035M14+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
JMSF026J21+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCNTCTNCCATATCACCACCTT
JMSF047G21+ TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
____________________________________________________________
consensus TCTCTTCAGAGAAGTGGATACCCTTTGCCCTTTTTATTGCTTCTGCCATATCACCACCTT
. : . : . : . : . : . :
JMSF022B04+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMSF022C04+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMFS088A12+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMFF029N06+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMFF019K17+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMSF027C07+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMSF035M14+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMSF026J21+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
JMFF051C02+ ATGATTATGCACACATAGCAACCCTTCTCCACNCAGGAGTCCTTATACT
JMSF047G21+ CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
____________________________________________________________
consensus CACAGTAACCTATGATTATGCACACATAGCAACCCTTCTCCACCCAGGAGTCCTTATACT
. : . : . : . : . : . :
JMSF022B04+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMSF022C04+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMFS088A12+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMFF029N06+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMFF019K17+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMSF027C07+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMSF035M14+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMSF026J21+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCNGGTGTGCATTTCGAC
JMFF051C02+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
JMSF047G21+ CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
____________________________________________________________
consensus CCACAATAAATGGGTTTTTCATTTTCGAAATGAGTGCCATCTCCTGGTGTGCATTTCGAC
. : . : . : . : . : . :
JMSF022B04+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMSF022C04+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMFS088A12+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMFF029N06+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMFF019K17+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMSF027C07+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMSF035M14+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMSF026J21+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMFF051C02+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
JMSF047G21+ GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
____________________________________________________________
consensus GTGTCCTGTCTGTTTGGCGAGCAAGACGAATTTTCTTCAAAACATACTTTTTCTTTTCAA
. : . : . : . : . : . :
JMSF022B04+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMSF022C04+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMFS088A12+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMFF029N06+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMFF019K17+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMSF027C07+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMSF035M14+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMSF026J21+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMFF051C02+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMSF047G21+ GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
JMFF023L21+ GCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
____________________________________________________________
consensus GCTTATGCCTCACAAGAAGGGCTGACCCAAAAGCCCCCTTCCCTATTTGCTCAAGGATTT
. : . : . : . : . : . :
JMSF022B04+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF022C04+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMFS088A12+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMFF029N06+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMFF019K17+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF027C07+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF035M14+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF026J21+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMFF051C02+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF047G21+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMSF006N22+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
JMFF023L21+ CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
____________________________________________________________
consensus CATATTGCTCCATTTTGTCCTAATGGAATCTTTGTCTCTCCACTCAACCGTGTAGCATCC
. : . : . : . : . : . :
JMSF022B04+ TCAATCCT
JMSF022C04+ TCAATCCT
JMFS088A12+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMFF029N06+ TCAATCC
JMFF019K17+ TCAATCC
JMSF027C07+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMSF035M14+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMSF026J21+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMFF051C02+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMSF047G21+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMSF006N22+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
JMFF023L21+ TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
____________________________________________________________
consensus TCAATCCGGAAACGTGAAAGCTTTTAATGGATCACGGATTCACGAGCTGCTCCACTGACA
. : . : . : . : . : . :
JMFS088A12+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMSF027C07+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMSF035M14+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMSF026J21+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMFF051C02+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMSF047G21+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMSF006N22+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
JMFF023L21+ TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
____________________________________________________________
consensus TTGATTGAAGAGAGGCGACAAAGCGGAAAACGAGCAGAGAGTGGTTGAAGAAAGTAGAAA
. : . : . : . : . : . :
JMFS088A12+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMSF027C07+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMSF035M14+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMSF026J21+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMFF051C02+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMSF047G21+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMSF006N22+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
JMFF023L21+ ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
____________________________________________________________
consensus ATAGTTCACATTCGCGGTCGGGAGCATGTAAAACGACGCCGTCGCGAAGCCTGCCTGCCT
. : . : . : . : . : . :
JMFS088A12+ TG
JMSF027C07+ TGTGGCT
JMSF035M14+ TGTGGCTACTGGCTAAGTGC
JMSF026J21+ TGTGGCTACTGGCTAAGTGC
JMFF051C02+ TGTGGCTACTGGCTAAGTGCAGAGAAGGAAGAAGACACTAGTAGACTTCATCATGCTCTC
JMSF047G21+ TGTGGCTACTGGCTAAGTGCAGAGAAGGAAGAAGACACTAGTAGACTTCATCATGCTCTC
JMSF006N22+ TGTGGCTACTGGCTAAGTGCAGAGAAGGAAGAAGACACT
JMFF023L21+ TGTGGCTACTGGCTAAGTGCAGAGAAGGAAGAAGACACTAGTAGACTTCATCATGCTCTC
____________________________________________________________
consensus TGTGGCTACTGGCTAAGTGCAGAGAAGGAAGAAGACACTAGTAGACTTCATCATGCTCTC