Contig 004552:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS094C11+                                      TCCATGATCAAAGCTGCATACTCCTCTGCTTGT
                      ____________________________________________________________
consensus                                        TCCATGATCAAAGCTGCATACTCCTCTGCTTGT
 
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JMFS094C11+           TCCTTCAATCTTGATAATTTATTTGCTGAAGCGCTGAGCATTATGATCTCTTTCACTTCC
                      ____________________________________________________________
consensus             TCCTTCAATCTTGATAATTTATTTGCTGAAGCGCTGAGCATTATGATCTCTTTCACTTCC
 
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JMFS094C11+           TCCTCTGCAATTCGACCATCTTCATTCTTATCCACCATGTCGAAGAAGATCTGGAGACGA
                      ____________________________________________________________
consensus             TCCTCTGCAATTCGACCATCTTCATTCTTATCCACCATGTCGAAGAAGATCTGGAGACGA
 
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JMFS094C11+           GAATCGAAGCTTTGATCAGTGATTTGGGACCAATACTCGTAAAGTTCCTCTTTGCTAATC
                      ____________________________________________________________
consensus             GAATCGAAGCTTTGATCAGTGATTTGGGACCAATACTCGTAAAGTTCCTCTTTGCTAATC
 
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JMFS094C11+           TTGTCCACCTTCAATCTTCTTCTTCTGCTTAAAGCATCGAACATTTCTACTGCAAATTCC
                      ____________________________________________________________
consensus             TTGTCCACCTTCAATCTTCTTCTTCTGCTTAAAGCATCGAACATTTCTACTGCAAATTCC
 
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JMFS094C11+           TTGGAGTCCTTCATTCCTATGCATTGCGCAAAATCAGCGCGGTAGAGATAACCGTCTTTT
                      ____________________________________________________________
consensus             TTGGAGTCCTTCATTCCTATGCATTGCGCAAAATCAGCGCGGTAGAGATAACCGTCTTTT
 
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JMFS094C11+           GCCAGCTTGTAAAAGTTGTTCTCTACTTCGTTCCATGCATTGGCGGCTTTGTTGTGGCTG
                      ____________________________________________________________
consensus             GCCAGCTTGTAAAAGTTGTTCTCTACTTCGTTCCATGCATTGGCGGCTTTGTTGTGGCTG
 
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JMFS094C11+           ATGAATCTGAGGCCACGAAGCGCTTTTTGCGCGCCGGAACGAGTGCGATCGAGCTGAGCG
JMSF042M15+                                                 ACGAGTGCGATCGAGCTGAGCG
                      ____________________________________________________________
consensus             ATGAATCTGAGGCCACGAAGCGCTTTTTGCGCGCCGGAACGAGTGCGATCGAGCTGAGCG
 
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JMFS094C11+           CGCTGTCGACGCAACTGGCGAGCCGCTAGAGCGGAATCCAAGCCGCTTGTTGTTCCGGAC
JMSF042M15+           CGC-GTCGACGCAACTGGCGAGCCGCTAGAGCGGAATCCAAGCCGCTTGTTGTTCCGGAC
                      ____________________________________________________________
consensus             CGCTGTCGACGCAACTGGCGAGCCGCTAGAGCGGAATCCAAGCCGCTTGTTGTTCCGGAC
 
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JMFS094C11+           GCCGATGAGAATGCACGAGGCGCATGTCCATGACTCCACGAGAATTTCTTCAGCTCCGCC
JMSF042M15+           GCCGATGAGAATGCACGAGGCGCATGTCCATGACTCCACGAGAATTTCTTCAGCTCCGCC
                      ____________________________________________________________
consensus             GCCGATGAGAATGCACGAGGCGCATGTCCATGACTCCACGAGAATTTCTTCAGCTCCGCC
 
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JMFS094C11+           TTGAGCTCTTGCGAGAACTGTTTGGCTTTCGCCAC                         
JMSF042M15+           TTGAGCTCTTGCGAGAACTGTTTGGCTTTCGCCACCGCCTCGGCTTTCAGCTCCTGAGAG
                      ____________________________________________________________
consensus             TTGAGCTCTTGCGAGAACTGTTTGGCTTTCGCCACCGCCTCGGCTTTCAGCTCCTGAGAG
 
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JMFF040D08+                                                              GTCGACGCA
JMSF042M15+           AACTGAAGAATCCGGTTCGACGAGCTTCGCCGTATAGTCGGCGACCGAGACGTCGACGCA
                      ____________________________________________________________
consensus             AACTGAAGAATCCGGTTCGACGAGCTTCGCCGTATAGTCGGCGACCGAGACGTCGACGCA
 
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JMFF040D08+           GAGCCGGAAGCTGACACCGGACCTTCGATCATCATTCCTCCACCTCCGACGAGATCATCA
JMSF042M15+           GAGCCGGAAGCTGACACCGGACCTTCGATCATCATTCCTCCACCTCCGACGAGATCATCA
                      ____________________________________________________________
consensus             GAGCCGGAAGCTGACACCGGACCTTCGATCATCATTCCTCCACCTCCGACGAGATCATCA
 
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JMFF040D08+           ATGCTTATGGCGGTCGCCGGCTCCACGCTCCTTAGAATTATGGTATCGTCATCCTGAAGG
JMSF042M15+           ATGCTTATGGCGGTCGCCGGCTCCACGCTCCTTAGAATTATGGTATCGTCATCCTGAAGG
                      ____________________________________________________________
consensus             ATGCTTATGGCGGTCGCCGGCTCCACGCTCCTTAGAATTATGGTATCGTCATCCTGAAGG
 
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JMFF040D08+           TCGAGCGTGACCTCCACGTATTCCTCCGCTGCGACCGCGGAGGAGTTCTCGGACTCAGTC
JMSF042M15+           TCGAGCGTGACCTCCACGTATTCCTCCGCTGCGACCGCGGAGGAGTTCTCGGACTCAGTC
JMFF023H19+                               TTCCTCCGCTGCGACCGCGGAGGAGTTCTCGGACTCAGTC
                      ____________________________________________________________
consensus             TCGAGCGTGACCTCCACGTATTCCTCCGCTGCGACCGCGGAGGAGTTCTCGGACTCAGTC
 
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JMFF040D08+           TCCGGCGAAATTCCCCCGATGACCGGCGGATCGCCCGGGACCGAGTCCGACGCCCACCTC
JMSF042M15+           TCCGGCGAAATTCCCCCGATGACCGGCGGATCGCCCGGGACCGAGTCCGACGCCCACCTC
JMFF023H19+           TCCGGCGAAATTCCCCCGATGACCGGCGGATCGCCCGGGACCGAGTCCGACGCCCACCTC
                      ____________________________________________________________
consensus             TCCGGCGAAATTCCCCCGATGACCGGCGGATCGCCCGGGACCGAGTCCGACGCCCACCTC
 
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JMFF040D08+           CGCTCATGCTTTGCGATTCCTCTCATTTAATCTAAAAACTTTAAAAATTGATCGAAATGC
JMSF042M15+           CGCTCATGCTTTGCGATTCCTCTCATTTAATCTAAAAACTTTAAAAATTGATCGAAATGC
JMFF023H19+           CGCTCATGCTTTGCGATTCCTCTCATTTAATCTAAAAACTTTAAAAATTGATCGAAATGC
                      ____________________________________________________________
consensus             CGCTCATGCTTTGCGATTCCTCTCATTTAATCTAAAAACTTTAAAAATTGATCGAAATGC
 
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JMFF040D08+           TATCCAGCTACTAGTGGCTCATACAAATCAAAGAATATAATGATGAAACTGAAGGAGAGA
JMSF042M15+           TATCCAGCTACTAGTGGCTCATACAAATCAAAGAATATAATGATGAAACTGAAGGAGAGA
JMFF023H19+           TATCCAGCTACTAGTGGCTCATACAAATCAAAGAATATAATGATGAAACTGAAGGAGAGA
                      ____________________________________________________________
consensus             TATCCAGCTACTAGTGGCTCATACAAATCAAAGAATATAATGATGAAACTGAAGGAGAGA
 
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JMFF040D08+           GCGAAATCTGAATTCTGAAGGGATATGAATTTGTCGTCGTCGTATGCGTCCGGAATCTGA
JMSF042M15+           GCGAAATCTGAATTCTGAAGGGATATGAATTTGTCGTCGTCGTATGCGTCCGGAATCTGA
JMFF023H19+           GCGAAATCTGAATTCTGAAGGGATATGAATTTGTCGTCGTCGTATGCGTCCGGAATCTGA
                      ____________________________________________________________
consensus             GCGAAATCTGAATTCTGAAGGGATATGAATTTGTCGTCGTCGTATGCGTCCGGAATCTGA
 
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JMFF040D08+           GAAAAAGGAGTGACCTACGAGGAGTCAGTGTGGATGTTCAGAGTTTTTATTAGAGAGAGA
JMSF042M15+           GAAAAAGGAGTGACCTACGAGGAGTCAGTGTGGATGTTCAGAGTTTTTATTAGAGAGAGA
JMFF023H19+           GAAAAAGGAGTGACCTACGAGGAGTCAGTGTGGATGTTCAGAGTTTTTATTAGAGAGAGA
                      ____________________________________________________________
consensus             GAAAAAGGAGTGACCTACGAGGAGTCAGTGTGGATGTTCAGAGTTTTTATTAGAGAGAGA
 
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JMFF040D08+           ATGAAAAGGTCCACAGAGAGAAAGTGAGAGGGAGCAAAGCGAC                 
JMSF042M15+           ATGAAAAGGTCCACAGAGAGAAAGTGAGAGGGAGCAAAGCGAC                 
JMFF023H19+           ATGAAAAGGTCCACAGAGAGAAAGTGAGAGGGAGCAAAGCGACAATGGAAATGCAGAGAC
                      ____________________________________________________________
consensus             ATGAAAAGGTCCACAGAGAGAAAGTGAGAGGGAGCAAAGCGACAATGGAAATGCAGAGAC