| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022I21 | Sequence | 497 | 004550 (5) | ref|NP_001275231.1| | 4e-18 | uncharacterized protein LOC102593187 [Solanum tuberosum] gb|ABB87100.1| unknown | 770 | 004550 (5) | ref|XP_009628085.1| | 107 | PREDICTED: uncharacterized protein LOC104118528 [Nicotiana tomentosiformis] ref| |
| JMFS064D02 | Sequence | 626 | 004550 (5) | ref|XP_009628085.1| | 106 | PREDICTED: uncharacterized protein LOC104118528 [Nicotiana tomentosiformis] ref| | |||||
| JMSF034O18 | Sequence | 670 | 004550 (5) | ref|XP_009628085.1| | 107 | PREDICTED: uncharacterized protein LOC104118528 [Nicotiana tomentosiformis] ref| | 736 | 004550 (5) | ref|XP_009628085.1| | 107 | PREDICTED: uncharacterized protein LOC104118528 [Nicotiana tomentosiformis] ref| |
This contig is upended
. : . : . : . : . : . :
rJMSF034O18- TAAGCAAAGAAA
____________________________________________________________
consensus TAAGCAAAGAAA
. : . : . : . : . : . :
JMSF034O18+ CAATTA
rJMSF034O18- TGGAGAATTGACAAGTGTGAAAAAGGCTCTACTGATAGAAGAAAAAACTGCACACAATTA
rJMFF022I21- AACTGCACACAATTA
____________________________________________________________
consensus TGGAGAATTGACAAGTGTGAAAAAGGCTCTACTGATAGAAGAAAAAACTGCACACAATTA
. : . : . : . : . : . :
JMSF034O18+ ACAATCACAGAAGCTAGTCTAGCATGTTATGATCATCTGTTTTTCAAACTTCAACTTCAA
rJMSF034O18- ACAATCACAGAAGCTAGTCTAGCATGTTATGATCATCTGTTTTTCAAACTTCAACTTCAA
JMFS064D02+ CAA
rJMFF022I21- ACAATCACAGAAGCTAGTCTAGCATGTTATGATCATCTGTTTTTCAAACTTCAACTTCAA
____________________________________________________________
consensus ACAATCACAGAAGCTAGTCTAGCATGTTATGATCATCTGTTTTTCAAACTTCAACTTCAA
. : . : . : . : . : . :
JMSF034O18+ GTCATGTTTAGGCTCAAGAACTGGAAAAGCCAAGGAGGGTGGGTCTTCTTCATCTGATCT
rJMSF034O18- GTCATGTTTAGGCTCAAGAACTGGAAAAGCCAAGGAGGGTGGGTCTTCTTCATCTGATCT
JMFS064D02+ GTCATGTTTAGGCTCAAGAACTGGAAAAGCCAAGGAGGGTGGGTCTTCTTCATCTGATCT
rJMFF022I21- GTCATGTTTAGGCTCAAGAACTGGAAAAGCCAAGGAGGGTGGGTCTTCTTCATCTGATCT
____________________________________________________________
consensus GTCATGTTTAGGCTCAAGAACTGGAAAAGCCAAGGAGGGTGGGTCTTCTTCATCTGATCT
. : . : . : . : . : . :
JMSF034O18+ TGTGTAAACTGCTGTGCAGGAGGAGCATTGGATCTGCTTTTGATTTCACCAAGATTTGAC
rJMSF034O18- TGTGTAAACTGCTGTGCAGGAGGAGCATTGGATCTGCTTTTGATTTCACCAAGATTTGAC
JMFS064D02+ TGTGTAAACTGCTGTGCAGGAGGAGCATTGGATCTGCTTTTGATTTCACCAAGATTTGAC
rJMFF022I21- TGTGTAAACTGCTGTGCAGGAGGAGCATTGGATCTGCTTTTGATTTCACCAAGATTTGAC
____________________________________________________________
consensus TGTGTAAACTGCTGTGCAGGAGGAGCATTGGATCTGCTTTTGATTTCACCAAGATTTGAC
. : . : . : . : . : . :
JMSF034O18+ TCTGCAGCCTTCCCTGAACTGCTCCTCCTTACATGGCTAGAATAATCTGAGGAGGAAGAG
rJMSF034O18- TCTGCAGCCTTCCCTGAACTGCTCCTCCTTACATGGCTAGAATAATCTGAGGAGGAAGAG
JMFS064D02+ TCTGCAGCCTTCCCTGAACTGCTCCTCCTTACATGGCTAGAATAATCTGAGGAGGAAGAG
rJMFF022I21- TCTGCAGCCTTCCCTGAACTGCTCCTCCTTACATGGCTAGAATAATCTGAGGAGGAAGAG
____________________________________________________________
consensus TCTGCAGCCTTCCCTGAACTGCTCCTCCTTACATGGCTAGAATAATCTGAGGAGGAAGAG
. : . : . : . : . : . :
JMSF034O18+ GAAAAGCTGAGAGCAGAATCTGAAGCCGCCTCTGCTGCTTTCCTCCTGCGATTATTGTAA
rJMSF034O18- GAAAAGCTGAGAGCAGAATCTGAAGCCGCCTCTGCTGCTTTCCTCCTGCGATTATTGTAA
JMFS064D02+ GAAAAGCTGAGAGCAGAATCTGAAGCCGCCTCTGCTGCTTTCCTCCTGCGATTATTGTAA
rJMFF022I21- GAAAAGCTGAGAGCAGAATCTGAAGCCGCCTCTGCTGCTTTCCTCCTGCGATTATTGTAA
____________________________________________________________
consensus GAAAAGCTGAGAGCAGAATCTGAAGCCGCCTCTGCTGCTTTCCTCCTGCGATTATTGTAA
. : . : . : . : . : . :
JMSF034O18+ CACGATGGGCCTAATGTCAGCTCCAGCTTGCTCTCGTCGTCTTCGATTCCCAGATCACCA
rJMSF034O18- CACGATGGGCCTAATGTCAGCTCCAGCTTGCTCTCGTCGTCTTCGATTCCCAGATCACCA
JMFS064D02+ CACGATGGGCCTAATGTCAGCTCCAGCTTGCTCTCGTCGTCTTCGATTCCCAGATCACCA
rJMFF022I21- CACGATGGGCCTAATGTCAGCTCCAGCTTGCTCTCGTCGTCTTCGATTCCCAGATCACCA
JMFF022I21+ TCGATTCCCAGATCACCA
____________________________________________________________
consensus CACGATGGGCCTAATGTCAGCTCCAGCTTGCTCTCGTCGTCTTCGATTCCCAGATCACCA
. : . : . : . : . : . :
JMSF034O18+ GACT-CCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
rJMSF034O18- GACT-CCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
JMFS064D02+ GACT-CCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
rJMFF022I21- GACT-CCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
JMFF022I21+ GACTCCCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
____________________________________________________________
consensus GACT-CCCCAATGCACTCTTCTTCTGCAGTCCCCTTGCTGGAATTTGAATTGGTAATAGC
. : . : . : . : . : . :
JMSF034O18+ AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
rJMSF034O18- AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
JMFS064D02+ AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
rJMFF022I21- AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
JMFF022I21+ AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
____________________________________________________________
consensus AGCTTTCTTGGCACCCTTCTGGCTTTCTTGCCTTTTCTGCTCTGCAATGTTCTTCATTAG
. : . : . : . : . : . :
JMSF034O18+ CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
rJMSF034O18- CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
JMFS064D02+ CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
rJMFF022I21- CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
JMFF022I21+ CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
____________________________________________________________
consensus CCCCTTCTGGATTCGATACAGACGATGAAGCTCATAAACCTGGTATCTGAAGGTTTCCTC
. : . : . : . : . : . :
JMSF034O18+ ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
rJMSF034O18- ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
JMFS064D02+ ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
rJMFF022I21- ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
JMFF022I21+ ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
____________________________________________________________
consensus ATGCTTTAACATAGCCATCTTCATAGATTCCTTATCATATGGATTAACAACCTTTTCCAT
. : . : . : . : . : . :
JMSF034O18+ TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
rJMSF034O18- TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
JMFS064D02+ TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
rJMFF022I21- TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
JMFF022I21+ TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
____________________________________________________________
consensus TGCAGTAAAAACCTGCAGAATTCTGGGTTTCTCAGCACCCTTTTCTTGGCACTTGCAGCC
. : . : . : . : . : . :
JMSF034O18+ CC
rJMSF034O18- CC
JMFS064D02+ CCTCACCCTCCCTCAGTTTATGTC
rJMFF022I21- CCTCACCCTCCCTCAGTTTATGTCTCCCTTTATAGACCTTGGGCTTGGAAGAGCTAGGTA
JMFF022I21+ CCTCACCCTCCCTCAGTTTATGTCTCCCTTTATAGACCTTGGGCTT-GAAGAGCTAGGTA
____________________________________________________________
consensus CCTCACCCTCCCTCAGTTTATGTCTCCCTTTATAGACCTTGGGCTTGGAAGAGCTAGGTA
. : . : . : . : . : . :
rJMFF022I21- GCTAGAAGAATCTTGAGACTANGGGGTAGCCCAGAA
JMFF022I21+ GCTAGAAGAATCTTGAGACTAGGGGGTAGCCCAGAATTGAATTGAAGATGAAGTGGATAA
____________________________________________________________
consensus GCTAGAAGAATCTTGAGACTAGGGGGTAGCCCAGAATTGAATTGAAGATGAAGTGGATAA
. : . : . : . : . : . :
JMFF022I21+ GAACAACAATAGAATCCTAGTACTGACGAGGAAGAATTTTAAGGTTGTGGGTTCTACTAC
____________________________________________________________
consensus GAACAACAATAGAATCCTAGTACTGACGAGGAAGAATTTTAAGGTTGTGGGTTCTACTAC