| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018K08 | Sequence | 509 | 004547 (6) | ref|XP_009612346.1| | 8e-10 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] | 735 | 001148 (8) | ref|XP_009617344.1| | 2e-75 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] |
| JMFF021O08 | Sequence | 500 | 004547 (6) | ref|XP_004241867.1| | 7e-10 | PREDICTED: patellin-3-like [Solanum lycopersicum] | 540 | 001148 (8) | ref|XP_009617344.1| | 3e-42 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] |
| JMFF023N14 | Sequence | 554 | 004547 (6) | ref|XP_004241867.1| | 9e-10 | PREDICTED: patellin-3-like [Solanum lycopersicum] | 703 | 001148 (8) | ref|XP_009617344.1| | 5e-67 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] |
| JMFF027O14 | Sequence | 551 | 004547 (6) | ref|XP_004241867.1| | 9e-10 | PREDICTED: patellin-3-like [Solanum lycopersicum] | 680 | 001148 (8) | ref|XP_009617344.1| | 7e-63 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] |
| JMFF034F01 | Sequence | 515 | 004547 (6) | ref|XP_009612346.1| | 8e-10 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] | 683 | 001148 (8) | ref|XP_009617344.1| | 2e-63 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] |
| JMFF036K13 | Sequence | 406 | 004547 (6) | ref|XP_009612346.1| | 2e-08 | PREDICTED: patellin-3-like [Nicotiana tomentosiformis] | 402 | 001148 (8) | gb|EYU22784.1| | 2e-07 | hypothetical protein MIMGU_mgv1a003476mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMFF034F01+ TTNGAGTTTCTCGACAACCACCGAAGGCTCGGCGGACGGC
JMFF018K08+ TTTCTCGACAACCACCGAAGGCTCGGCGGACGGC
____________________________________________________________
consensus TTNGAGTTTCTCGACAACCACCGAAGGCTCGGCGGACGGC
. : . : . : . : . : . :
JMFF034F01+ GCCTCCGTGGGTGGCGGTGGAATCTCTTTCTCTGTTTCTTTCACCTCCTCCTTTTTCTCC
JMFF018K08+ GCCTCCGTGGGTGGCGGTGGAATCTCTTTCTCTGTTTCTTTCACCTCCTCCTTTTTCTCC
JMFF023N14+ CCTTTTTCTCC
JMFF027O14+ CCTTTTTCTCC
____________________________________________________________
consensus GCCTCCGTGGGTGGCGGTGGAATCTCTTTCTCTGTTTCTTTCACCTCCTCCTTTTTCTCC
. : . : . : . : . : . :
JMFF034F01+ TCCTCCGCCTTGGGCGGCGCTTCCGCGTCTTTCTTCTCTTCCGACACAGGCGCTTCCTTG
JMFF018K08+ TCCTCCGCCTTGGGCGGCGCTTCCGCGTCTTTCTTCTCTTCCGACACAGGCGCTTCCTTG
JMFF036K13+ TTGGGCGGCGCTTCCGCGTCTTTNTTCTCTTCNGACACAGGCGCTTCATTG
JMFF023N14+ TCCTCCGCCTTGGGCGGCGCTTCCGCGTCTTTCTTCTCTTCCGACACAGGCGCTTCCTTG
JMFF027O14+ TCCTCCGCCTTGGGCGGCGCTTCCGCGTCTTTCTTCTCTTCCGACACAGGCGCTTCCTTG
JMFF021O08+ CCGACACAGGCGCTTCCTTG
____________________________________________________________
consensus TCCTCCGCCTTGGGCGGCGCTTCCGCGTCTTTCTTCTCTTCCGACACAGGCGCTTCCTTG
. : . : . : . : . : . :
JMFF034F01+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
JMFF018K08+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
JMFF036K13+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
JMFF023N14+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
JMFF027O14+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
JMFF021O08+ GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
____________________________________________________________
consensus GTCGGCTCCGGCGCAGCCTCGGATTCTTTCTTATCCTCCTCCGGCTTGGGTTGCTCTTCC
. : . : . : . : . : . :
JMFF034F01+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
JMFF018K08+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
JMFF036K13+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
JMFF023N14+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
JMFF027O14+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
JMFF021O08+ GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
____________________________________________________________
consensus GCAACCGGAGCGGCGGCGGCGGCGGGTTTCTTCTCCTCCTCCTTAGGCTTAGCGGTAAAG
. : . : . : . : . : . :
JMFF034F01+ TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
JMFF018K08+ TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
JMFF036K13+ TCGTGGTTGTTCAAAGCCTCNTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
JMFF023N14+ TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
JMFF027O14+ TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
JMFF021O08+ TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
____________________________________________________________
consensus TCGTGGTTGTTCAAAGCCTCCTGAACCAACGCCTTAAACTCATCCAACGCCTTCTTCTCC
. : . : . : . : . : . :
JMFF034F01+ GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
JMFF018K08+ GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
JMFF036K13+ GGGTTGGGAAGCTCCTCCACCTNGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
JMFF023N14+ GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
JMFF027O14+ GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
JMFF021O08+ GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
____________________________________________________________
consensus GGGTTGGGAAGCTCCTCCACCTTGTTGCTCTCCTCCTTAAACGAACCCGACTCCGTAACC
. : . : . : . : . : . :
JMFF034F01+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
JMFF018K08+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
JMFF036K13+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
JMFF023N14+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
JMFF027O14+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
JMFF021O08+ GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
____________________________________________________________
consensus GCAGCCTTCTCCTTCTCCTCCTCAGCCGTCTTCTCAGGCTCCGGCTCCGGCGTCGCCTCC
. : . : . : . : . : . :
JMFF034F01+ TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTT
JMFF018K08+ TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTT
JMFF036K13+ TTCTCCACAACCTCAGNTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTT
JMFF023N14+ TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTTCTTGT
JMFF027O14+ TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTTCTTGT
JMFF021O08+ TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTTCTTGT
____________________________________________________________
consensus TTCTCCACAACCTCAGCTGCGGCCTCCGGCACCGGCGCCGTCGCCGGCGCCACTTCTTGT
. : . : . : . : . : . :
JMFF023N14+ GCCGGCGTCTCTTGAGCGGGTGCCTTAGTTTCTTCCGCCATATATACCAAGTATCGAATA
JMFF027O14+ GCCGGCGTCTCTTGAGCGGGTGCCTTAGTTTCTTCCGCCATATATACCAAGTATCGAATA
JMFF021O08+ GCCGGCGTCTCTTGAGCGGGTGCCTTAGTTTCTTCCGCCATATATACCAAGTATCGAATA
____________________________________________________________
consensus GCCGGCGTCTCTTGAGCGGGTGCCTTAGTTTCTTCCGCCATATATACCAAGTATCGAATA
. : . : . : . : . : . :
JMFF023N14+ CCCAAAAGGAAAACGATAAATTCGAAGAGAAATTAATAAAACTCTGCGAAGAAGAAGAGT
JMFF027O14+ CCCAAAAGGAAAACGATAAATTCGAAGAGAAATTAATAAAACTCTGCGAAGAAGAAGAGT
JMFF021O08+ CCCAAAAGGAAAACGATAAATTCGAAGAGAAATTAATAAAACTCTGCGAAGAAGAAGAGT
____________________________________________________________
consensus CCCAAAAGGAAAACGATAAATTCGAAGAGAAATTAATAAAACTCTGCGAAGAAGAAGAGT