| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003P05 | Sequence | 508 | 004541 (24) | ref|XP_009616586.1| | 3e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | |||||
| JMFF012F18 | Sequence | 582 | 004541 (24) | ref|XP_009616586.1| | 5e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 561 | 004541 (24) | ref|XP_009616586.1| | 4e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] |
| JMFF021J11 | Sequence | 511 | 004541 (24) | ref|XP_009616586.1| | 3e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 711 | 004541 (24) | ref|XP_009598528.1| | 4e-23 | PREDICTED: auxin-repressed 12.5 kDa protein-like isoform X1 [Nicotiana tomentos |
| JMFF042H02 | Sequence | 574 | 004541 (24) | ref|XP_009616586.1| | 1e-42 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 577 | 004541 (24) | ref|XP_009616586.1| | 6e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] |
| JMSF001B08 | Sequence | 232 | 004541 (24) | ref|XP_009788085.1| | 1e-12 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana sylvestris] gb|ABY16 | 121 | 004541 (24) | |||
| JMSF004E10 | Sequence | 390 | 000573 (73) | ref|WP_001224007.1| | 1e-53 | cation transporter [Escherichia coli] gb|EHN90401.1| cation efflux system protei | 473 | 004541 (24) | |||
| JMSF004G12 | Sequence | 270 | 004541 (24) | ref|XP_009616586.1| | 1e-16 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 132 | 001783 (9) | ref|XP_009804387.1| | 2e-04 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest |
| JMSF009J07 | Sequence | 287 | 004541 (24) | ref|XP_009616586.1| | 4e-20 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 642 | 004541 (24) | gb|AAS76635.1| | 1e-24 | auxin-repressed protein [Nicotiana tabacum] |
| JMSF012K01 | Sequence | 498 | 004541 (24) | gb|KDO77639.1| | 3e-24 | hypothetical protein CISIN_1g032874mg [Citrus sinensis] | 683 | 011382 (29) | ref|XP_009622218.1| | 1e-57 | PREDICTED: pollen-specific protein C13-like [Nicotiana tomentosiformis] |
| JMSF016H04 | Sequence | 255 | 004541 (24) | ref|XP_009788085.1| | 2e-12 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana sylvestris] gb|ABY16 | 765 | 004541 (24) | ref|XP_009616586.1| | 6e-29 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] |
| JMSF026P04 | Sequence | 720 | 004541 (24) | ref|XP_009616586.1| | 2e-42 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 712 | 004541 (24) | ref|XP_009616586.1| | 3e-24 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] |
| JMSF032L18 | Sequence | 480 | 004541 (24) | ref|XP_009616586.1| | 2e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 425 | 004541 (24) | ref|XP_009616586.1| | 1e-43 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] |
| JMSF035N19 | Sequence | 723 | 004541 (24) | ref|XP_009616586.1| | 3e-42 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana tomentosiformis] | 641 | 004541 (24) | gb|AAS76635.1| | 1e-24 | auxin-repressed protein [Nicotiana tabacum] |
| JMSF044L11 | Sequence | 811 | 004541 (24) | ref|XP_009788085.1| | 1e-29 | PREDICTED: auxin-repressed 12.5 kDa protein-like [Nicotiana sylvestris] gb|ABY16 | 662 | 004541 (24) | gb|AAS76635.1| | 1e-24 | auxin-repressed protein [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF004E10- AACGACATAAAGATTAAACAAAAGACATGATTACAC
rJMSF044L11- TCAACCATTAGAGTAGAAGANACGACATAAAGATTAAACAAAAGACATGATTACAC
rJMFF021J11- C
rJMSF009J07- AACGACATAAAGATTAAACAAAAGACATGATTACAC
rJMSF035N19- AACGACATAAAGATTAAACAAAAGACATGATTACAC
rJMSF016H04- AACGACATAAAGATTAAACAAAAGACATGATTACAC
____________________________________________________________
consensus TCAACCATTAGAGTAGAAGAAACGACATAAAGATTAAACAAAAGACATGATTACAC
. : . : . : . : . : . :
rJMSF004E10- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMSF044L11- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMFF021J11- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMSF026P04- GTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMSF009J07- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMSF035N19- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
rJMSF016H04- ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
JMSF044L11+ CAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
____________________________________________________________
consensus ATAGTGATTAACATATAAGCAAGCAAATTAAAGTACTAATCATAGATTCTTAGTATGCAT
. : . : . : . : . : . :
rJMSF004E10- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
rJMSF044L11- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
rJMFF021J11- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
rJMSF026P04- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
rJMSF009J07- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
rJMSF035N19- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
JMSF012K01+ CCAAATGTTCT
rJMSF016H04- AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
JMSF044L11+ AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
JMSF026P04+ CAAATGTTCN
JMSF035N19+ CAAATGTTCT
____________________________________________________________
consensus AGGATCAAGGATTTCGCTGAGTCATTGTGTCACCGTGATCTACATCCTTCCAAATGTTCT
. : . : . : . : . : . :
rJMSF004E10- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
rJMSF044L11- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
rJMFF021J11- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
rJMSF026P04- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
rJMSF009J07- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
rJMSF035N19- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
JMSF012K01+ GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATCCAACTTTTTAAGGGAAGATTT
rJMSF016H04- GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
JMSF044L11+ GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
JMSF026P04+ GTCGTGCTANGATATAAAGAGCTCTNGTAG-TGAAGATTCAAC-TTTTAAGGGAAGATTT
JMSF035N19+ GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
____________________________________________________________
consensus GTCGTGCTAGGATATAAAGAGCTCTTGTAGTTGAAGATTCAACTTTTTAAGGGAAGATTT
. : . : . : . : . : . :
rJMSF004E10- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMSF044L11- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMFF021J11- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMSF026P04- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMSF009J07- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMSF035N19- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
JMSF012K01+ TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
rJMSF016H04- TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
JMSF044L11+ TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
JMSF026P04+ TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
JMSF035N19+ TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
____________________________________________________________
consensus TTTGGTGAACTTATAAATCTTCACAAATGTTCCGTCATGTCAGGATATAAAGAGCTCTTG
. : . : . : . : . : . :
rJMSF004E10- TAATTGAAGATCCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMSF044L11- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMFF021J11- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMSF026P04- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMSF009J07- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMSF035N19- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
JMSF012K01+ TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMSF016H04- TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
JMSF044L11+ TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
JMSF026P04+ TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
rJMFF012F18- TTTTTGGTGAGCTTATAGATTGGTTATGG
rJMFF042H02- TTTTTTGGTGAGCTTATAGATTGGTTATGG
JMFF012F18+ TTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
JMFF042H02+ TTTTTTGGTGAGCTTATAGATTGGTTATGG
JMSF035N19+ TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
____________________________________________________________
consensus TAATTGAAGATTCAATTTTTCGAGAGAAGATTTTTTGGTGAGCTTATAGATTGGTTATGG
. : . : . : . : . : . :
rJMSF004E10- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMSF044L11- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMFF021J11- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMSF026P04- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAATGTAAAAGATCATAT
rJMSF009J07- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMSF035N19- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMSF012K01+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMSF016H04- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMSF044L11+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMSF026P04+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAATGTAAAAGATCATAT
rJMFF012F18- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
rJMFF042H02- TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMFF012F18+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMFF042H02+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMSF035N19+ TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
JMFF003P05+ TAGTAGCCGATCCAA-GTAAAAGATCATAT
JMFF021J11+ TTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
____________________________________________________________
consensus TAAAACCGATGTGTTTTGACAACATTTTTGTAGTAGCCGATCCAA-GTAAAAGATCATAT
. : . : . : . : . : . :
rJMSF004E10- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMSF044L11- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMFF021J11- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMSF026P04- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMSF009J07- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMSF035N19- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMSF012K01+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTAAATGTATATATC
rJMSF016H04- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMSF044L11+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMSF026P04+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMFF012F18- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMFF042H02- CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMFF012F18+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMFF042H02+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMSF032L18+ TAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
rJMSF032L18- ATGTATATATC
JMSF035N19+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMFF003P05+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
JMFF021J11+ CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
____________________________________________________________
consensus CGATAGTACAAGAAGTGAAGCACTCATATTATATATAGCTTGTATTTACATGTATATATC
. : . : . : . : . : . :
rJMSF004E10- CATCATCTCTTATC
rJMSF044L11- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMFF021J11- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMSF026P04- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMSF009J07- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMSF035N19- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMSF012K01+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMSF016H04- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMSF044L11+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMSF026P04+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMFF012F18- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMFF042H02- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMFF012F18+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMFF042H02+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMSF032L18+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
rJMSF032L18- CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMSF035N19+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMFF003P05+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
JMFF021J11+ CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
____________________________________________________________
consensus CATCATCTCTTATCTCAATCCTCAACGATGCTTGGATCTGGTTTCTCCACTATACATCCA
. : . : . : . : . : . :
rJMSF044L11- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMFF021J11- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMSF026P04- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMSF009J07- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMSF035N19- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMSF012K01+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMSF016H04- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMSF044L11+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMSF026P04+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMFF012F18- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMFF042H02- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMFF012F18+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMFF042H02+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMSF032L18+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
rJMSF032L18- GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMSF035N19+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMFF003P05+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
JMFF021J11+ GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
____________________________________________________________
consensus GTCATAAACAGTGGGGGAGTTGGGGTGAATAGGCTTGTCAAAAACCGCTGCTCCGATTCT
. : . : . : . : . : . :
rJMSF044L11- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMFF021J11- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMSF026P04- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMSF009J07- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMSF035N19- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF012K01+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMSF016H04- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF044L11+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF026P04+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMFF012F18- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMFF042H02- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF009J07+ GCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF004G12+ GTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF016H04+ CCACACGTTCTCCTTACGCGC
JMFF012F18+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMFF042H02+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF032L18+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
rJMSF032L18- CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMSF035N19+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMFF003P05+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
JMFF021J11+ CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
____________________________________________________________
consensus CTTGGTGGCGAGGTTACTCCCCGGGTGGAACACGCTCCTCCACACGTTCTCCTTACGCGC
. : . : . : . : . : . :
rJMSF044L11- CGTCGGA
rJMFF021J11- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTANGGCTCGCCGGCATCGTCATCGA
rJMSF026P04- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
rJMSF009J07- CGTCGGA
rJMSF035N19- CGTCGG
rJMSF016H04- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF044L11+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF026P04+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
rJMFF012F18- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
rJMFF042H02- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF009J07+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF004G12+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF016H04+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMFF012F18+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMFF042H02+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF032L18+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
rJMSF032L18- CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF001B08+ GGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMSF035N19+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMFF003P05+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
JMFF021J11+ CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
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consensus CGTCGGAGACGGAGTCGACGGCGTCGTCGGCGTTGTAGGGCTCGCCGGCATCGTCATCGA
. : . : . : . : . : . :
rJMFF021J11- CCTCTGGTACTTGCTGCTCGATCCTTCCCCANCTTCCACACTTGNTTGAAC
rJMSF026P04- CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTT
rJMSF016H04- CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGN
JMSF044L11+ CCTCTGGTAC-TGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF026P04+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
rJMFF012F18- CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
rJMFF042H02- CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF009J07+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF004G12+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF016H04+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMFF012F18+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMFF042H02+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF032L18+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
rJMSF032L18- CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
rJMSF001B08+ GCTCGATCCTTCCCCAGCTTCCACACTNGTNNGAACGGAAAGGGT
JMSF001B08+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMSF035N19+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMFF003P05+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
JMFF021J11+ CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
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consensus CCTCTGGTACTTGCTGCTCGATCCTTCCCCAGCTTCCACACTTGTTTGAACGGAAAGGGT
. : . : . : . : . : . :
rJMSF016H04- TTTGCGGAGC
JMSF044L11+ TTTGCGGAGCTTATCGAGG-CCGGTTTACGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF026P04+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
rJMFF012F18- TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
rJMFF042H02- TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF009J07+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF004G12+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF016H04+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMFF012F18+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMFF042H02+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF032L18+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
rJMSF032L18- TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
rJMSF001B08+ TTTGCGGAGCTTATCGAGATCCGGTTTCCGGNNGAGGTCCGGCCATAACATCATCCCACA
JMSF001B08+ TTTGCGGAGCTTATCGAGA-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMSF035N19+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMFF003P05+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
JMFF021J11+ TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
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consensus TTTGCGGAGCTTATCGAGG-CCGGTTTCCGGCTGAGGTCCGGCCATAACATCATCCCACA
. : . : . : . : . : . :
JMSF044L11+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGT
JMSF026P04+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGT
rJMFF012F18- GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGT
rJMFF042H02- GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAA
JMSF009J07+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTG
JMSF004G12+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGG
JMSF016H04+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGT
JMFF012F18+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGT
JMFF042H02+ GCTTCTCTAACATCTTTCCTCTCTG-TTTTTCTCTGCTCTAAGCTCAATGGTGTC
JMSF032L18+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTC
rJMSF032L18- GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTC
rJMSF001B08+ GNTTCTCTAACATCTT
JMSF001B08+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGT
JMSF035N19+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTC
JMFF003P05+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTC
JMFF021J11+ GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTCGTTAG
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consensus GCTTCTCTAACATCTTTCCTCTCTGTTTTTTCTCTGCTCTAAGCTCAATGGTGTCGTTAG