Contig 004540:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF003D16-                                          CTATTACGCCAAAATCGGCAAGGCGTGGA
                      ____________________________________________________________
consensus                                            CTATTACGCCAAAATCGGCAAGGCGTGGA
 
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JMFF003D16-           AACGTGGTTATCTCCTCTACGGCCCTCCGGGCACCGGAAAATCTTCCATGGTGGCGGCTA
                      ____________________________________________________________
consensus             AACGTGGTTATCTCCTCTACGGCCCTCCGGGCACCGGAAAATCTTCCATGGTGGCGGCTA
 
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JMFF003D16-           TGGCGAATTTCCTTGGATACGACGTGTATGATTTGGAGCTAACCGCCGTGAAGGATAACA
                      ____________________________________________________________
consensus             TGGCGAATTTCCTTGGATACGACGTGTATGATTTGGAGCTAACCGCCGTGAAGGATAACA
 
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JMFF003D16-           CCACGCTCAGAAAACTCCTGATCGATACTTCCGGCAAGTCGATTATAGTAATCGAAGATA
                      ____________________________________________________________
consensus             CCACGCTCAGAAAACTCCTGATCGATACTTCCGGCAAGTCGATTATAGTAATCGAAGATA
 
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JMFF003D16-           TCGATTGCTCCCTGGACCTCACCGGCCAGAGGGAAGGGCAGACGAAAGATAAATCCGGCG
rJMFF003D16+                                           AAGGGCAGACGAAAGATAAATCCGGCG
                      ____________________________________________________________
consensus             TCGATTGCTCCCTGGACCTCACCGGCCAGAGGGAAGGGCAGACGAAAGATAAATCCGGCG
 
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JMFF003D16-           TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
rJMFF003D16+          TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
                      ____________________________________________________________
consensus             TCGAGAAATTAGATCCGCTGAAAATGGAAGAGAAGAAGAGCGAAGTGACACTTTCCGGTC
 
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JMFF003D16-           TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
rJMFF003D16+          TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
                      ____________________________________________________________
consensus             TACTCAACTTCATCGACGGCCTCTGGTCCGCCATTGGAGGAGAAAGGCTCATCGTCTTCA
 
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JMFF003D16-           CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
rJMFF003D16+          CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
                      ____________________________________________________________
consensus             CCACAAACTTCAGGGAAAAGCTCGACCCGGCCCTGATTCGGAGAGGAAGAATGGATAAAC
 
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JMFF003D16-           ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
rJMFF003D16+          ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
                      ____________________________________________________________
consensus             ACATCGAGCTGTCATACTGCGGATTCGAAGCGTTTAAGGTCCTGGCTAAAAACTACTTAG
 
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JMFF003D16-           GAATCCAAACCCACGAGCTTTTCCCGAC                                
rJMFF003D16+          GAATCCAAACCCACGAGCTTTTCCCGACGGTGGGGCGGTTGTTGACCGAGACCGGCATGA
                      ____________________________________________________________
consensus             GAATCCAAACCCACGAGCTTTTCCCGACGGTGGGGCGGTTGTTGACCGAGACCGGCATGA
 
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rJMFF003D16+          CGCCGGCGGATGTTGCGGAGAATTTGATGCCCAAAGCGGCCGAGGACGACGAGACTACGT
                      ____________________________________________________________
consensus             CGCCGGCGGATGTTGCGGAGAATTTGATGCCCAAAGCGGCCGAGGACGACGAGACTACGT
 
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rJMFF003D16+          GTCTGGAGAAACTGGTTCAGGCTCTGGAGAAAGCTAAGGAAGACGCGAGACTGAAAGCAG
                      ____________________________________________________________
consensus             GTCTGGAGAAACTGGTTCAGGCTCTGGAGAAAGCTAAGGAAGACGCGAGACTGAAAGCAG
 
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rJMFF021I19+                         AGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
rJMFF003D16+          AGGGAGAAGAAGAGGAGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
JMFF021I19-                          AGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
                      ____________________________________________________________
consensus             AGGGAGAAGAAGAGGAGAAGAGAAAGGCAGCGGCGGCAGAAGAAAATGAACAGAAAAGCT
 
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rJMFF021I19+          TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
rJMFF003D16+          TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
JMFF021I19-           TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
                      ____________________________________________________________
consensus             TAGAAGAAACCATGGCGGCTGCAAATGGTGTGAAGGAAAATGGTCACGTTTCGATCAAGG
 
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rJMFF021I19+          ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
rJMFF003D16+          ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
JMFF021I19-           ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
                      ____________________________________________________________
consensus             ATGATTGAGACCAAGAAGACAAGAATGAACAAAGACTATGGAGATAAGAGCAACGAACGG
 
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rJMFF021I19+          CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
rJMFF003D16+          CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
JMFF021I19-           CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
                      ____________________________________________________________
consensus             CAATGATTAAGCGGCAAGATTTGGGGTTTTTCCGAATGATTAACAATAATAAATGTACCA
 
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rJMFF021I19+          TTTTGCTTAAAAATAAATAAATAAA                                   
rJMFF003D16+          TTTTGCTTAAAAATAAATAAATAAAATG                                
JMFF021I19-           TTTTGCTTAAAAATAAATAAATAAAATGGTTCATCGTTGCATATGATTCCAAAAAAAAAA
                      ____________________________________________________________
consensus             TTTTGCTTAAAAATAAATAAATAAAATGGTTCATCGTTGCATATGATTCCAAAAAAAAAA