Contig 004539:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021H08Sequence583004539 (3)ref|XP_002285144.1|131PREDICTED: uncharacterized protein LOC100263969 [Vitis vinifera] emb|CBI16312.3|576004539 (3)ref|XP_002285144.1|131PREDICTED: uncharacterized protein LOC100263969 [Vitis vinifera] emb|CBI16312.3|
JMFN043B23Sequence607004539 (3)ref|XP_002285144.1|119PREDICTED: uncharacterized protein LOC100263969 [Vitis vinifera] emb|CBI16312.3|

Alignment

This contig is upended


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JMFN043B23+                                        CAAGAACTGAAGACCATAGAACTCTCCATGT
                      ____________________________________________________________
consensus                                          CAAGAACTGAAGACCATAGAACTCTCCATGT
 
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JMFN043B23+           TTTTTATTGGTACATTAATAGAATTAAGTTTCTTCAATACATGACTCCAAATAAATGTCA
rJMFF021H08-                                  TAAGTTTCTTCAACACATGACTCCAAATAAATGTCA
JMFF021H08+                                   TAAGTTTCTTCAACACATGACTCCAAATAAATGTCA
                      ____________________________________________________________
consensus             TTTTTATTGGTACATTAATAGAATTAAGTTTCTTCAACACATGACTCCAAATAAATGTCA
 
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JMFN043B23+           CAAAACAAGCAACCTAATAATGTGCTGCATCATTGCAGCAGAACATGGTTGCTTTCCTCT
rJMFF021H08-          CAAAACAAGCAACCTAATAATGTGCTGCATCATTGCAGCAGAACATGGTTGCTTTCCTCT
JMFF021H08+           CAAAACAAGCAACCTAATAATGTGCTGCATCATTGCAGCAGAACATGGTTGCTTTCCTCT
                      ____________________________________________________________
consensus             CAAAACAAGCAACCTAATAATGTGCTGCATCATTGCAGCAGAACATGGTTGCTTTCCTCT
 
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JMFN043B23+           TTCAGTCACTATGAAACAAAAGGCTACAACTCAAAGGAAGCCATTGCATGTGCAGGTGTA
rJMFF021H08-          TTCAGTCACTATGAAACAAAAGGCTACAACTCAAAGGAAGCCATTGCATGTACAGGTGTA
JMFF021H08+           TTCAGTCACTATGAAACAAAAGGCTACAACTCAAAGGAAGCCATTGCATGTACAGGTGTA
                      ____________________________________________________________
consensus             TTCAGTCACTATGAAACAAAAGGCTACAACTCAAAGGAAGCCATTGCATGTACAGGTGTA
 
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JMFN043B23+           TGAATTTTACAAAACGACAGTAAAAAGTTTGTGAAGCAGCTCTAGAATTGCACAATGATT
rJMFF021H08-          TGAATTTTACAAAACGACAGTAAAAAGTTTGTGAAGCAGCTCTAGAATTGCACAATGATT
JMFF021H08+           TGAATTTTACAAAACGACAGTAAAAAGTTTGTGAAGCAGCTCTAGAATTGCACAATGATT
                      ____________________________________________________________
consensus             TGAATTTTACAAAACGACAGTAAAAAGTTTGTGAAGCAGCTCTAGAATTGCACAATGATT
 
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JMFN043B23+           TCTACCATCCACGGGAGCTG--AGACTTGATGACAGGTCCCATAATCTGATCCACTGTTT
rJMFF021H08-          TCTACCATCCACGGGAGCTGACAGACTTGATGACAGGTCCCATAATCTGATCCACTGTTT
JMFF021H08+           TCTACCATCCACGGGAGCTGACAGACTTGATGACAGGTCCCATAATCTGATCCACTGTTT
                      ____________________________________________________________
consensus             TCTACCATCCACGGGAGCTGACAGACTTGATGACAGGTCCCATAATCTGATCCACTGTTT
 
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JMFN043B23+           TATTCCATAGGTGTGCAAACTCAAAGCGGCGCTCCTTTTCAAAAATAGGCTCTTTTATCT
rJMFF021H08-          TATTCCATAGGTGTGCAAACTCAAAGCGGCGCTCCTTTTCAAAAATAGGCTCTTTTATCT
JMFF021H08+           TATTCCATAGGTGTGCAAACTCAAAGCGGCGCTCCTTTTCAAAAATAGGCTCTTTTATCT
                      ____________________________________________________________
consensus             TATTCCATAGGTGTGCAAACTCAAAGCGGCGCTCCTTTTCAAAAATAGGCTCTTTTATCT
 
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JMFN043B23+           GAGAATGAGGAAAAAAATGAGATTGAGTATCAGAGACGGTCTTGTAAATACTCCGGCGCT
rJMFF021H08-          GAGAATGAGGAAAAAAATGAGATTGAGTATCAGAGACGGTCTTGTAAATACTCCGGCGCT
JMFF021H08+           GAGAATGAGGAAAAAAATGAGATTGAGTATCAGAGACGGTCTTGTAAATACTCCGGCGCT
                      ____________________________________________________________
consensus             GAGAATGAGGAAAAAAATGAGATTGAGTATCAGAGACGGTCTTGTAAATACTCCGGCGCT
 
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JMFN043B23+           GCTCAAATACCACCACCCCCGTGAGTATGCTCCCTAATGCTGCTCCCAGCAAACGCTCCT
rJMFF021H08-          GCTCAAATACCACCACCCCCGTGAGTATGCTCCCTAATGCTGCTCCCAGCAAACGCTCCT
JMFF021H08+           GCTCAAATACCACCACCCCCGTGAGTATGCTCCCTAATGCTGCTCCCAGCAAACGCTCCT
                      ____________________________________________________________
consensus             GCTCAAATACCACCACCCCCGTGAGTATGCTCCCTAATGCTGCTCCCAGCAAACGCTCCT
 
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JMFN043B23+           GAGTGAGAATACTGATCATGGCGAAGTTTTTTGAATGGATCTTCAGGTTAGGGCGTACAG
rJMFF021H08-          GAGTGAGAATACTGATCATGGCGAAGTTTTTTGAATGGATCTTCAGGTTAGGGCGTACAG
JMFF021H08+           GAGTGAGAATACTGATCATGGCGAAGTTTTTTGAATGGATCTTCAGGTTAGGGCGTACAG
                      ____________________________________________________________
consensus             GAGTGAGAATACTGATCATGGCGAAGTTTTTTGAATGGATCTTCAGGTTAGGGCGTACAG
 
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JMFN043B23+           TTTGAGTGGCTTTCCGGCGACCTCTATGAAGATCGAAA                      
rJMFF021H08-          TTTGAGTGGCTTTCCGGCGACCTCTATGAAGATCGAAACTTCTGGCCTCCGTTCAACTTT
JMFF021H08+           TTTGAGTGGCTTTCCGGCGACCTCTATGAAGATCGAAACTTCTGGCCTCCGTTCAACTTT
                      ____________________________________________________________
consensus             TTTGAGTGGCTTTCCGGCGACCTCTATGAAGATCGAAACTTCTGGCCTCCGTTCAACTTT