Contig 004538:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021G24Sequence486004538 (3)ref|XP_011095407.1|2e-25PREDICTED: probable beta-1,3-galactosyltransferase 2 [Sesamum indicum]671005406 (3)emb|CDP05735.1|1e-49unnamed protein product [Coffea canephora]
JMFF048O02Sequence141004538 (3)446024425
JMSF034P16Sequence646004538 (3)ref|XP_011095407.1|2e-70PREDICTED: probable beta-1,3-galactosyltransferase 2 [Sesamum indicum]775005406 (3)emb|CDP05735.1|1e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF034P16+                 TTCGGCTGCTAAAGGCGGTATTTATGCCAACGACCATTAGATATTTTCGTTTCT
                      ____________________________________________________________
consensus                   TTCGGCTGCTAAAGGCGGTATTTATGCCAACGACCATTAGATATTTTCGTTTCT
 
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JMSF034P16+           TATTCAATTCCGGGATCTTCAAGTCTTCAGATATCGGGGAGCCAGTCAGTATAGAATCCT
                      ____________________________________________________________
consensus             TATTCAATTCCGGGATCTTCAAGTCTTCAGATATCGGGGAGCCAGTCAGTATAGAATCCT
 
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JMSF034P16+           GAAAAGCCCTTGCTGCAGCTAACTCCATCTCTAAATTAGATATTGTTTTATCCAGAGTTT
                      ____________________________________________________________
consensus             GAAAAGCCCTTGCTGCAGCTAACTCCATCTCTAAATTAGATATTGTTTTATCCAGAGTTT
 
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JMSF034P16+           GTATAGCGTTTTGTGTCTTTGAAACCTCAATAAGAATATCCCGGGATTCCCTTTCTGGGT
                      ____________________________________________________________
consensus             GTATAGCGTTTTGTGTCTTTGAAACCTCAATAAGAATATCCCGGGATTCCCTTTCTGGGT
 
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JMSF034P16+           GCTTAATTCCAGTATCACAGCCCTCTGAAACTAACTTTATCTTGTCATCCTCCATCTGTG
JMFF021G24+            CTTAATTCCAGTATCACAGCCTTCTGAAACTAACTTTATCTTGTCATCCTCCATCTGTG
                      ____________________________________________________________
consensus             GCTTAATTCCAGTATCACAGCCTTCTGAAACTAACTTTATCTTGTCATCCTCCATCTGTG
 
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JMSF034P16+           TAGGCCGTGATATGCCCTTAGCTTCTGGCACCGTCCACATTCTGTCAGTGAAGAGCATCC
JMFF021G24+           TAGGCCGTGATATGCCCTTAGCTTCTGGCACCGTCCACATTCTGTCAGTGAAGAGCATCC
                      ____________________________________________________________
consensus             TAGGCCGTGATATGCCCTTAGCTTCTGGCACCGTCCACATTCTGTCAGTGAAGAGCATCC
 
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JMSF034P16+           CGACACAGAAGCATCCAACACAGAGCAAGATTGTTAATTTTCTTGAAACAACACTCTTTG
JMFF021G24+           CGACACAGAAGCATCCAACACAGAGCAAGATTGTTAATTTTCTTGAAACAACACTCTTTG
                      ____________________________________________________________
consensus             CGACACAGAAGCATCCAACACAGAGCAAGATTGTTAATTTTCTTGAAACAACACTCTTTG
 
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JMSF034P16+           GGGTGGAATCAAATCCCCTGCTTTTCCAACCCATTTT                       
JMFF021G24+           GGGTGGAATCAAATCCCCTGCTTTTCCAACCCATTTTTCTCTTCTTCTTCTTCTTCTCTG
                      ____________________________________________________________
consensus             GGGTGGAATCAAATCCCCTGCTTTTCCAACCCATTTTTCTCTTCTTCTTCTTCTTCTCTG
 
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JMFF048O02+                                                                    CTA
JMFF021G24+           CTCGAAACCAATCAGAATTCAAATTCAAGGAATACCCATCTCAGTTCCCAAGCCAACCTA
                      ____________________________________________________________
consensus             CTCGAAACCAATCAGAATTCAAATTCAAGGAATACCCATCTCAGTTCCCAAGCCAACCTA
 
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JMFF048O02+           GCTCAAGAACCAGATTCAGAGTTCCAAGACTAGATTTTTCACTACAAAATTCAAAAACAG
JMFF021G24+           GCTCAAGAACCAGATTCAGAGTTCCAAGACTAGATTTTTCACTACAAAATTCAAAAACAG
                      ____________________________________________________________
consensus             GCTCAAGAACCAGATTCAGAGTTCCAAGACTAGATTTTTCACTACAAAATTCAAAAACAG
 
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JMFF048O02+           AATGAGAAGAAGGTGGTATTGGGGTATTGGTGGTTTGTGGAATTTGAGGACAAGACGACT
JMFF021G24+           AATGAGAAGAAGGTGGTATTGGGGTATTGGTGGTTTGTGGAATTTGAGGACAAGACGACT
                      ____________________________________________________________
consensus             AATGAGAAGAAGGTGGTATTGGGGTATTGGTGGTTTGTGGAATTTGAGGACAAGACGACT
 
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JMFF048O02+           CACTTTGCCACCCACC                                            
JMFF021G24+           CAATTTGCCACCCACCCAAATGGATTCCAACTGAACACCAGGTAGGCTCAAGAGTCAACC
                      ____________________________________________________________
consensus             CACTTTGCCACCCACCCAAATGGATTCCAACTGAACACCAGGTAGGCTCAAGAGTCAACC