Contig 004527:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017F03Sequence559004527 (2)gb|ACU18192.1|3e-64unknown [Glycine max]786012315 (2)ref|XP_010315560.1|9e-70PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Solanum lyco
JMFF025O23Sequence549004527 (2)gb|ACU18192.1|2e-68unknown [Glycine max]731012315 (2)ref|XP_010035647.1|4e-60PREDICTED: equilibrative nucleotide transporter 3-like [Eucalyptus grandis] ref

Alignment

This contig is upended


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JMFF025O23+                                                              AAAGCGCCT
JMFF017F03+                                                    CCCAGATGTCAAAGCGCCT
                      ____________________________________________________________
consensus                                                      CCCAGATGTCAAAGCGCCT
 
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JMFF025O23+           GAAGCAGCCGAACCAGCAAGAAAAGACTGAACCAAATCAGGTAACATAAATGAAAGATCG
JMFF017F03+           GAAGCAGCCGAACCAGCAAGAAAAGACTGAACCAAATCAGGTAACATAAATGAAAGATCG
                      ____________________________________________________________
consensus             GAAGCAGCCGAACCAGCAAGAAAAGACTGAACCAAATCAGGTAACATAAATGAAAGATCG
 
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JMFF025O23+           CCAACCATTCCACCCTGAACATGAGCATCTGCAATACCAAAAGCACCACTAATCGTGCAT
JMFF017F03+           CCAACCATTCCACCCTGAACATGAGCATCTGCAATACCAAAAGCACCACTAATCGTGCAT
                      ____________________________________________________________
consensus             CCAACCATTCCACCCTGAACATGAGCATCTGCAATACCAAAAGCACCACTAATCGTGCAT
 
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JMFF025O23+           ATCCCAATGTATGTTCCGATTCCTCCCCTACCAGACGTGGCCAAATCTATAACAAGAACT
JMFF017F03+           ATCCCAATGTATGTTCCGATTCCTCCCCTACCAGACGTGGCCAAATCTATAACAAGAACT
                      ____________________________________________________________
consensus             ATCCCAATGTATGTTCCGATTCCTCCCCTACCAGACGTGGCCAAATCTATAACAAGAACT
 
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JMFF025O23+           AGAAAAGTGCTGATGAAGAAAAGGGAATATCCAAAGAGAATGCGTTTTCTGGTGTCAATT
JMFF017F03+           AGAAAAGTGCTGATGAAGAAAAGGGAATATCCAAAGAGAATGCGTTTTCTGGTGTCAATT
                      ____________________________________________________________
consensus             AGAAAAGTGCTGATGAAGAAAAGGGAATATCCAAAGAGAATGCGTTTTCTGGTGTCAATT
 
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JMFF025O23+           TTTGCCTCATGGTATGCTAGTATTGCGATTGTCCCAAGAGCAAAGGGTTGATAAACAAGG
JMFF017F03+           TTTGCCTCATGGTATGCTAGTATTGCGATTGTCCCAAGAGCAAAGGGTTGATAAACAAGG
                      ____________________________________________________________
consensus             TTTGCCTCATGGTATGCTAGTATTGCGATTGTCCCAAGAGCAAAGGGTTGATAAACAAGG
 
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JMFF025O23+           GTCAGGACCCTTGAAGGGTGGTACTTCGGAAACAAGTAACCATAATAATCCCCAATTGTT
JMFF017F03+           GTCAGGACCCTTGAAGGGTGGTACTTCGGAAACAAGTAACCATAATAATCCCCAATTGTT
                      ____________________________________________________________
consensus             GTCAGGACCCTTGAAGGGTGGTACTTCGGAAACAAGTAACCATAATAATCCCCAATTGTT
 
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JMFF025O23+           AACATACTGTTCCAAGAAAAGAGGCACCCATTCCCCAGAAGCCAACACACTACCACTGCA
JMFF017F03+           AACATACTGTTCCAAGAAAAGAGGCACCCATTCCCCAGAAGCCAACACACTACCACTGCA
                      ____________________________________________________________
consensus             AACATACTGTTCCAAGAAAAGAGGCACCCATTCCCCAGAAGCCAACACACTACCACTGCA
 
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JMFF025O23+           ATATACTTCCCCTCAAGCCTAGACGGAGCGCGCTCTTCAACCGCCATGGATTCACTTCTT
JMFF017F03+           ATATACTTCCCCTCAAGCCTAGACGGAGCGCGCTCTTCAACCGCCATGGATTCACTTCTT
                      ____________________________________________________________
consensus             ATATACTTCCCCTCAAGCCTAGACGGAGCGCGCTCTTCAACCGCCATGGATTCACTTCTT
 
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JMFF025O23+           CTTCTTCACCTCCTTAATGAAATCCGTGCAGTTGCTTAAGGATTTCTGTTAAGGTCATAC
JMFF017F03+           CTTCTTCACCTCCTTAATGAAATCCGTGCAGTTGCTTAAGGATTTCTGTTAAGGTCATAC
                      ____________________________________________________________
consensus             CTTCTTCACCTCCTTAATGAAATCCGTGCAGTTGCTTAAGGATTTCTGTTAAGGTCATAC