Contig 004520:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF044C10+                                                            TTTTTTTTTTG
                      ____________________________________________________________
consensus                                                              TTTTTTTTTTG
 
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JMSF044C10+           GAAGGGAATGTTTAACAGTGTTTCATAGAAGATGAAAGGTTTAGAACAACCAAAAATGCT
rJMSF044C10-                                                          ACCAAAAATGCT
                      ____________________________________________________________
consensus             GAAGGGAATGTTTAACAGTGTTTCATAGAAGATGAAAGGTTTAGAACAACCAAAAATGCT
 
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JMSF044C10+           TATTGAAGGGACATGAAGTTTTCTATTTTTCTTACAAAAATGAAAAATCATACCAAATGT
rJMSF044C10-          TATTGAAGGGACATGAAGTTTTCTATTTTTCTTACAAAAATGAAAAATCATACCAAATGT
                      ____________________________________________________________
consensus             TATTGAAGGGACATGAAGTTTTCTATTTTTCTTACAAAAATGAAAAATCATACCAAATGT
 
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JMSF044C10+           AACTACATAATGGTTTATAGAAGAGCTGCTTGAATGCTCACTTTTACTGTCTGCTTCAGA
rJMSF044C10-          AACTACATAATGGTTTATAGAAGAGCTGCTTGAATGCTCACTTTTACTGTCTGCTTCAGA
                      ____________________________________________________________
consensus             AACTACATAATGGTTTATAGAAGAGCTGCTTGAATGCTCACTTTTACTGTCTGCTTCAGA
 
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JMSF044C10+           ATGACTTAAAAACATTAACGACAACAAAGTTGTCATCTTTCTGGTTGAGAAGTGGTCCCG
rJMSF044C10-          ATGACTTAAAAACATTAACGACAACAAAGTTGTCATCTTTCTGGTTGAGAAGTGGTCCCG
JMFF016D11+                                                    TGGTTGAGAAGTGGTCCCG
                      ____________________________________________________________
consensus             ATGACTTAAAAACATTAACGACAACAAAGTTGTCATCTTTCTGGTTGAGAAGTGGTCCCG
 
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JMSF044C10+           GGTGCGCTCTCTTGCAACTGCTTGTTCTTCTCCAGCTTTTGCATGGCCATTTTTTTCTCT
rJMSF044C10-          GGTGCGCTCTCTTGCAACTGCTTGTTCTTCTCCAGCTTTTGCATGGCCATTTTTTTCTCT
JMFF016D11+           GGTGCGCTCTCTTGCAACTGCTTGTTCTTCTCCAGCTTTTGCATGGCCATTTTTTTCTCT
                      ____________________________________________________________
consensus             GGTGCGCTCTCTTGCAACTGCTTGTTCTTCTCCAGCTTTTGCATGGCCATTTTTTTCTCT
 
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JMSF044C10+           GCCTCAACTTGTTCGAGCAAAGCCTGTCTGTGCATTTCTGTCATCACATCTGTCATTGTC
rJMSF044C10-          GCCTCAACTTGTTCGAGCAAAGCCTGTCTGTGCATTTCTGTCATCACATCTGTCATTGTC
JMFF016D11+           GCCTCAACTTGTTCGAGCAAAGCCTGTCTGTGCATTTCTGTCATCACATCTGTCATTGTC
                      ____________________________________________________________
consensus             GCCTCAACTTGTTCGAGCAAAGCCTGTCTGTGCATTTCTGTCATCACATCTGTCATTGTC
 
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JMSF044C10+           GTTGCCTCTCTTTCAAGCTGCATCTGCATTACAACTTCTGCTTCCTTTTCAATTGGCTTG
rJMSF044C10-          GTTGCCTCTCTTTCAAGCTGCATCTGCATTACAACTTCTGCTTCCTTTTCAATTGGCTTG
JMFF016D11+           GTTGCCTCTCTTTCAAGCTGCATCTGCATTACAACTTCTGCTTCCTTTTCAATTGGCTTG
                      ____________________________________________________________
consensus             GTTGCCTCTCTTTCAAGCTGCATCTGCATTACAACTTCTGCTTCCTTTTCAATTGGCTTG
 
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JMSF044C10+           AAATATTCATTGATTGCACTCTCAGTGTCTTCTAGCTTCTTATTCAGAGCTTGCATCTCT
rJMSF044C10-          AAATATTCATTGATTGCACTCTCAGTGTCTTCTAGCTTCTTATTCAGAGCTTGCATCTCT
JMFF016D11+           AAATATTCATTGATTGCACTCTCAGTGTCTTCTAGCTTCTTATTCAGAGCTTGCATCTCT
                      ____________________________________________________________
consensus             AAATATTCATTGATTGCACTCTCAGTGTCTTCTAGCTTCTTATTCAGAGCTTGCATCTCT
 
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JMSF044C10+           TCCACCATGTTACGAACCTCCGTTAAAATTATCTGTTCTGGCACTTTCTTTATTGCTGCC
rJMSF044C10-          TCCACCATGTTACGAACCTCCGTTAAAATTATCTGTTCTGGCACTTTCTTTATTGCTGCC
JMFF016D11+           TCCACCATGTTACGAACCTCCGTTAAAATTATCTGTTCTGGCACTTTCTTTATTGCTGCC
                      ____________________________________________________________
consensus             TCCACCATGTTACGAACCTCCGTTAAAATTATCTGTTCTGGCACTTTCTTTATTGCTGCC
 
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JMSF044C10+           TTCCGCTCTTCTGCCTGCTGAAGACGCTGCTGAATCTGTAGGCGATAAGACCGGATTCTT
rJMSF044C10-          TTCCGCTCTTCTGCCTGCTGAAGACGCTGCTGAATCTGTAGGCGATAAGACCGGATTCTT
JMFF016D11+           TTCCGCTCTTCTGCCTGCTGAAGACGCTGCTGAATCTGTAGGCGATAAGACCGGATTCTT
                      ____________________________________________________________
consensus             TTCCGCTCTTCTGCCTGCTGAAGACGCTGCTGAATCTGTAGGCGATAAGACCGGATTCTT
 
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JMSF044C10+           CGCTCTTCATAGCCCGACAGAACCCTAACGTAGAACAAAGCTTTTCTCCCAAAATCAATT
rJMSF044C10-          CGCTCTTCATAGCCCGACAGAACCCTAACGTAGAACAAAGCTTTTCTCCCAAAATCAATT
JMFF016D11+           CGCTCTTCATAGCCCGACAGAACCCTAACGTAGAACAAAGCTTTTCTCCCAAAATCAATT
                      ____________________________________________________________
consensus             CGCTCTTCATAGCCCGACAGAACCCTAACGTAGAACAAAGCTTTTCTCCCAAAATCAATT
 
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JMSF044C10+           AACCTCTTCATTGTAGAAAATGAAAAGCTCCAAACTCGATCAATCACATAACAACAAATA
rJMSF044C10-          AACCTCTTCATTGTAGAAAATGAAAAGCTCCAAACTCGATCAATCACATAACAACAAATA
JMFF016D11+           AACCTCTTCATTGTAGAAAATGAAAAGCTCCAAACTCGATCAATCACATAACAACAAATA
                      ____________________________________________________________
consensus             AACCTCTTCATTGTAGAAAATGAAAAGCTCCAAACTCGATCAATCACATAACAACAAATA
 
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JMSF044C10+           AATCCAGGGACGGAGCACGAT                                       
rJMSF044C10-          AATCCAGGGACGGAGCACGAT                                       
JMFF016D11+           AATCCAGGGACGGAGCACGATGGGATGATTGCTGAAAACGGATTATTTGAATAAGGAATT
                      ____________________________________________________________
consensus             AATCCAGGGACGGAGCACGATGGGATGATTGCTGAAAACGGATTATTTGAATAAGGAATT