| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015C09 | Sequence | 574 | 004517 (2) | ref|XP_006343674.1| | 83.2 | PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum] | 714 | 004519 (4) | ref|XP_004242571.1| | 127 | PREDICTED: uncharacterized protein DDB_G0287625 [Solanum lycopersicum] |
| JMFF015F08 | Sequence | 542 | 004519 (4) | ref|XP_006343674.1| | 105 | PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum] | 505 | 004519 (4) | ref|XP_006343674.1| | 105 | PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum] |
| JMFF029E02 | Sequence | 483 | 004517 (2) | ref|XP_006343674.1| | 81.3 | PREDICTED: uncharacterized protein LOC102595293 [Solanum tuberosum] | 589 | 004519 (4) | ref|XP_004242571.1| | 124 | PREDICTED: uncharacterized protein DDB_G0287625 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF015C09+ TTCACGGATGAAGCTAACATTGACGTTGTAG
____________________________________________________________
consensus TTCACGGATGAAGCTAACATTGACGTTGTAG
. : . : . : . : . : . :
rJMFF015C09+ TGGAAGAGGGGGATGATAAAGACGATGACTTAGTGCAAAAAGATGAAAATATTGATAAGC
____________________________________________________________
consensus TGGAAGAGGGGGATGATAAAGACGATGACTTAGTGCAAAAAGATGAAAATATTGATAAGC
. : . : . : . : . : . :
rJMFF029E02+ TCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
rJMFF015C09+ CTATGGGTAGAAGTGAAAATTGTGAGAGTTCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
____________________________________________________________
consensus CTATGGGTAGAAGTGAAAATTGTGAGAGTTCTGTGGTTGAAGCAGGAGGTTCAGAGCACA
. : . : . : . : . : . :
rJMFF029E02+ TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGGCAGGG
rJMFF015C09+ TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGACAGGG
rJMFF015F08+ GG
JMFF015F08- GG
____________________________________________________________
consensus TGATTCCGGGGGTGTCAATTCCAGGTGTTTCAGGAGTCCCAGAGACTTGTGGCGGCAGGG
. : . : . : . : . : . :
rJMFF029E02+ CTGTGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
rJMFF015C09+ CTGTGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
rJMFF015F08+ CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
JMFF015F08- CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
____________________________________________________________
consensus CTATGGATGAGGAATGGGATAGTGACAGTGACGATGATGATTTGCGCATTGTGTTGAATG
. : . : . : . : . : . :
rJMFF029E02+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
rJMFF015C09+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
rJMFF015F08+ ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
JMFF015F08- ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
____________________________________________________________
consensus ACAACAATCATGGACCTATGGGAATGGACAGAATGGGAGGTGATGGTGATGATGACGATG
. : . : . : . : . : . :
rJMFF029E02+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
rJMFF015C09+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
rJMFF015F08+ ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
JMFF015F08- ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
____________________________________________________________
consensus ATGATGGGGACCCTTTGGTTATTGTAGCTAACAGTGATGATCCTAGTCATCAACCAATGG
. : . : . : . : . : . :
rJMFF029E02+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
rJMFF015C09+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
rJMFF015F08+ TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
JMFF015F08- TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
____________________________________________________________
consensus TGGAGGAGCAAGAATGGGGTGATGAGCTGGGCAATTCTGCCGATGGGGAGAGGAAGGAGG
. : . : . : . : . : . :
rJMFF029E02+ ATGCTACAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
rJMFF015C09+ ATGCTACAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
rJMFF015F08+ ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
JMFF015F08- ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
____________________________________________________________
consensus ATGCTGCAAAAGTGAATGTTGGACCAGGATATGCGCCAAAGATTGGGTACAGCAATCATG
. : . : . : . : . : . :
rJMFF029E02+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
rJMFF015C09+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
rJMFF015F08+ GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
JMFF015F08- GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
____________________________________________________________
consensus GGTACCACCATCCATATCATTCACAGTTTAAGGTCAGTCGTGACGTTGACACCTGGGGTT
. : . : . : . : . : . :
rJMFF029E02+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
rJMFF015C09+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
rJMFF015F08+ TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
JMFF015F08- TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
____________________________________________________________
consensus TGTGCTTCCTCATCTTGTTTGATCAGACTATGAAATGTAAATTGACTTATAGTTGTCATG
. : . : . : . : . : . :
rJMFF029E02+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
rJMFF015C09+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
rJMFF015F08+ TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
JMFF015F08- TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
____________________________________________________________
consensus TGATGTGGAACTAGTGATTATAAACTGGTCAGAATTGTTGAATGCACTCGTAAAATGGAT
. : . : . : . : . : . :
rJMFF029E02+ AGTTGTACTGATTTTGAT
rJMFF015C09+ AGTTGTACTGATTTTGAT
rJMFF015F08+ AGTTGTACTGATTTTGAT
JMFF015F08- AGTTGTACTGATTTTGATATTAATGAAATTGTCTTCTTTTTTTGCTTTCCAAAAAAAAAA
____________________________________________________________
consensus AGTTGTACTGATTTTGATATTAATGAAATTGTCTTCTTTTTTTGCTTTCCAAAAAAAAAA