| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011M22 | Sequence | 581 | 004514 (11) | ref|XP_006345079.1| | 2e-93 | PREDICTED: serine/threonine-protein kinase 16-like [Solanum tuberosum] | |||||
| JMFF014I10 | Sequence | 202 | 004514 (11) | 762 | 004514 (11) | emb|CAN66918.1| | 2e-105 | hypothetical protein VITISV_043041 [Vitis vinifera] | |||
| JMFF019E18 | Sequence | 545 | 004514 (11) | ref|XP_006345079.1| | 2e-84 | PREDICTED: serine/threonine-protein kinase 16-like [Solanum tuberosum] | 710 | 004514 (11) | emb|CAN66918.1| | 4e-104 | hypothetical protein VITISV_043041 [Vitis vinifera] |
| JMFF035G24 | Sequence | 565 | 004514 (11) | ref|XP_006345079.1| | 5e-90 | PREDICTED: serine/threonine-protein kinase 16-like [Solanum tuberosum] | 675 | 004514 (11) | ref|XP_002269355.1| | 2e-91 | PREDICTED: serine/threonine-protein kinase 16 [Vitis vinifera] emb|CBI15371.3| u |
| JMFF036H10 | Sequence | 562 | 004514 (11) | ref|XP_006345079.1| | 4e-90 | PREDICTED: serine/threonine-protein kinase 16-like [Solanum tuberosum] | 764 | 004514 (11) | ref|XP_002269355.1| | 1e-104 | PREDICTED: serine/threonine-protein kinase 16 [Vitis vinifera] emb|CBI15371.3| u |
| JMSF021L24 | Sequence | 702 | 004514 (11) | ref|XP_006345079.1| | 9e-135 | PREDICTED: serine/threonine-protein kinase 16-like [Solanum tuberosum] | 782 | 004514 (11) | ref|XP_002269355.1| | 2e-116 | PREDICTED: serine/threonine-protein kinase 16 [Vitis vinifera] emb|CBI15371.3| u |
This contig is upended
. : . : . : . : . : . :
rJMFF036H10- TATATATATT
rJMFF014I10- ATATATT
____________________________________________________________
consensus TATATATATT
. : . : . : . : . : . :
rJMFF036H10- ATAATAAAAATGAATGTAACCATTTACTTAAACTAGGTATAAGACATTTTATGAATCCAC
rJMFF014I10- ATAATAAAAATGAATGTAACCATTTACTTAAACTAGGTATAAGACATTTTATGAATCCAC
rJMFF019E18- TTTATGAATCCAC
rJMFF035G24- ATTTTATGAATCCAC
rJMSF021L24- CATTTACTTAAACTAGGTATAAGACATTTTATGAATCCAC
____________________________________________________________
consensus ATAATAAAAATGAATGTAACCATTTACTTAAACTAGGTATAAGACATTTTATGAATCCAC
. : . : . : . : . : . :
rJMFF036H10- ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
rJMFF014I10- ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
rJMFF019E18- ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
rJMFF035G24- ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
rJMSF021L24- ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
____________________________________________________________
consensus ATTGAAGTTCAGGCACTCATATATCACAGAGCAAAAGATAGATATTGGCCATTTCTTGAA
. : . : . : . : . : . :
rJMFF036H10- TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
rJMFF014I10- TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
rJMFF019E18- TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
rJMFF035G24- TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
rJMSF021L24- TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
____________________________________________________________
consensus TTAAAACCAAAAGAAAAATGCAACTGCAAAAACCTCCTCCAGTATGTTGTCCCTAACCAA
. : . : . : . : . : . :
rJMFF036H10- TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
rJMFF014I10- TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
rJMFF019E18- TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
rJMFF035G24- TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
rJMSF021L24- TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
____________________________________________________________
consensus TGACGACCTATGCTTCTTATCATATTTTTCGCAAAGTAATTATGAGCATGTCTCTTAGGT
. : . : . : . : . : . :
rJMFF036H10- CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
rJMFF014I10- CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
rJMFF019E18- CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
rJMFF035G24- CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
rJMSF021L24- CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
____________________________________________________________
consensus CGACAGCGCACCTCTCAGTGAGAGAACTTCGAGATCAACTTATCAACGTGAATCACAATA
. : . : . : . : . : . :
rJMFF036H10- TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
rJMFF014I10- TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
rJMFF019E18- TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
rJMFF035G24- TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
rJMSF021L24- TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
____________________________________________________________
consensus TCATCTATGTGGGGGCGAACAGTTGCTTGAGGCTGAAGCATCCATGTCACGAACTGGTGA
. : . : . : . : . : . :
rJMFF036H10- AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
rJMFF014I10- AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
rJMFF019E18- AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
rJMFF035G24- AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
rJMSF021L24- AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
____________________________________________________________
consensus AGGGCTTCGGGATATTTGGGGTCAGAAAGACCTGTTGGCCACTTTACCTGAGCATTAACA
. : . : . : . : . : . :
rJMFF036H10- ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
rJMFF014I10- ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
rJMFF019E18- ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
rJMFF035G24- ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
rJMSF021L24- ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
____________________________________________________________
consensus ATGGCCAACTGTAGGCTTCCACCGGATTCCCCAAGCGCATACTCAAACGGGGACACTCCA
. : . : . : . : . : . :
rJMFF036H10- TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
rJMFF014I10- TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
rJMFF019E18- TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
rJMFF035G24- TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
rJMSF021L24- TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
____________________________________________________________
consensus TACATTATTGCATATAAAGTACAACCCAATGACCAGATATCAGTTCTTTCATCAATATCA
. : . : . : . : . : . :
rJMFF036H10- GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
rJMFF014I10- GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
rJMFF019E18- GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
rJMFF035G24- GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
rJMSF021L24- GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
____________________________________________________________
consensus GCATGGCTTGGGCAATCCCACAGTTCAGGAGCTCGGAAGGGTGCTGAGACATGCTCCGAT
. : . : . : . : . : . :
rJMFF036H10- GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
rJMFF014I10- GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
rJMFF019E18- GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
rJMFF035G24- GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
rJMSF021L24- GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
JMSF021L24+ CAGGACGA
____________________________________________________________
consensus GCCCATTCCTGCAACTGTAAAGCCTCTGAACGAGACCGTATTTGCTTTCTTGCAGGACGA
. : . : . : . : . : . :
rJMFF036H10- GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAN
rJMFF014I10- GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAG
rJMFF019E18- GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAN
rJMFF035G24- GCACTTCCAAAATCCATCAATATTGCAAGAGGTGGNTTGCCCTTTTCTATGTGTCAAAAG
rJMSF021L24- GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAG
JMSF021L24+ GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAG
____________________________________________________________
consensus GCACTTCCAAAATCCATCAATATTGCAAGAGGTGG-TTGCCCTTTTCTATGTGTCAAAAG
. : . : . : . : . : . :
rJMFF036H10- GACATTGCCAGGTTTTACATCATTATGTGCATAGG
rJMFF014I10- GACATTGCCAGGTTTTACATCATTATGTGCATAGGA
rJMFF019E18- GACATTGCCAGGNTTTACATCATTATGTGCATAGGA
rJMSF021L24- GACATTGCCAGGTTTTACATCATTATGTGCATAGGATGGTTCAAAATTGTGCATATGCTT
JMSF021L24+ GACATTGCCAGGTTTTACATCATTATGTGCATAGGATGGTTCAAAATTGTGCATATGCTT
____________________________________________________________
consensus GACATTGCCAGGTTTTACATCATTATGTGCATAGGATGGTTCAAAATTGTGCATATGCTT
. : . : . : . : . : . :
rJMSF021L24- GAGTCCTGCACAAAGCTGACGAA
JMSF021L24+ GAGTCCTGCACAAAGCTGACGAAATATTTGAAGAACATCTGAGGTAGAAAAGGACTCCTT
JMFF011M22+ GTAGAAAAGGACTCCTT
____________________________________________________________
consensus GAGTCCTGCACAAAGCTGACGAAATATTTGAAGAACATCTGAGGTAGAAAAGGACTCCTT
. : . : . : . : . : . :
JMSF021L24+ CTTTGCTTTCATAGCCGTGGCATTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
JMFF011M22+ CTTTGCTTTCATAGCCGTGGCATTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
JMFF036H10+ TTGCTTTCATAGCCGTGGCATTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
JMFF019E18+ TTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
JMFF035G24+ TTGCTTTCATAGCCGTGGCATTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
____________________________________________________________
consensus CTTTGCTTTCATAGCCGTGGCATTGTCCAGCAAGGTTCCATCCATGTGGACAGGAAACAA
. : . : . : . : . : . :
JMSF021L24+ TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
JMFF011M22+ TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
JMFF036H10+ TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
JMFF019E18+ TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
JMFF035G24+ TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
____________________________________________________________
consensus TAAGTATGCTTCATGCTTCCAAGATTGACCTTCAGAGGCCTTGACAGCTATGACAGCATG
. : . : . : . : . : . :
JMSF021L24+ ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
JMFF011M22+ ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
JMFF036H10+ ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
JMFF019E18+ ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
JMFF035G24+ ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
____________________________________________________________
consensus ATCAAGGAGAGGAAGCAGATTGGGATGACTAAACAGTGATGAAACACGGATCTCTTCCTT
. : . : . : . : . : . :
JMSF021L24+ CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
JMFF011M22+ CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
JMFF036H10+ CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
JMFF019E18+ CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
JMFF035G24+ CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
____________________________________________________________
consensus CACCAAATCCAATTGTTCACTATTCTGAATAAGAACTTTCTTCATTGCATAAGTTCCATT
. : . : . : . : . : . :
JMSF021L24+ ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
JMFF011M22+ ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
JMFF036H10+ ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
JMFF019E18+ ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
JMFF035G24+ ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
____________________________________________________________
consensus ATCAGAGGCATGAGAAGGGTCCTTGAATTTCTTGGAAACTCCGGGTTTGGCGGGGTCGGC
. : . : . : . : . : . :
JMSF021L24+ GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
JMFF011M22+ GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
JMFF036H10+ GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
JMFF019E18+ GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
JMFF035G24+ GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
____________________________________________________________
consensus GAGGATCTCCTTCACAAGGTAGACGTACGCGAAGCCACCCTCGCCGAGCTGGCGGACGAT
. : . : . : . : . : . :
JMSF021L24+ CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
JMFF011M22+ CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
JMFF036H10+ CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
JMFF019E18+ CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
JMFF035G24+ CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
JMFF014I10+ CGTTGACGGCGTCGTACAGAGC
____________________________________________________________
consensus CCGGAACCGGTTATCATTGATCCAGACGTCACCACCGCCGTTGACGGCGTCGTACAGAGC
. : . : . : . : . : . :
JMSF021L24+ ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
JMFF011M22+ ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
JMFF036H10+ ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
JMFF019E18+ ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
JMFF035G24+ ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
JMFF014I10+ ACTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
____________________________________________________________
consensus ATTCAGCCCCGAGAACGAGCACCCCATCTTCTTTCTAGCAATGGGTCAGCTCCCTCTCGC
. : . : . : . : . : . :
JMSF021L24+ TTCTCACTCTAGATCTCTAACAAAATTCTCT
JMFF011M22+ TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
JMFF036H10+ TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
JMFF019E18+ TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
JMFF035G24+ TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
JMFF014I10+ TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
____________________________________________________________
consensus TTCTCACTCTAGATCTCTAACAAAATTCTCTCTCTCTCTAGGAATGGAAGTTTTCCGTAG
. : . : . : . : . : . :
JMFF011M22+ CCTGGTAAGAGTTGGAGGTATCTC
JMFF036H10+ CCTGGTAAGAGTTGGAGGTATCTC
JMFF019E18+ CCTGGTAAGAGTTGGAGGTATCTC
JMFF035G24+ CCTGGTAAGAGTTGGAGGTATCTC
JMFF014I10+ CCTGGTAAGAGTTGGAGGTATCTCAGTATCTCCCTCGTCGCGGATCCACCACACGAAGAT
____________________________________________________________
consensus CCTGGTAAGAGTTGGAGGTATCTCAGTATCTCCCTCGTCGCGGATCCACCACACGAAGAT