Contig 004511:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013H24Sequence326004511 (2)703013024 (6)ref|XP_009119726.1|2e-60PREDICTED: acyl-coenzyme A thioesterase 8 isoform X1 [Brassica rapa]
JMFF030I22Sequence350004511 (2)513013024 (6)ref|XP_010479876.1|1e-24PREDICTED: acyl-coenzyme A thioesterase 8-like [Camelina sativa]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+                     ANNCCCCCCNTTTTTTTAAANNAAGGCCNAAAAAAAAAAAAAAAAAGATT
JMFF013H24+                                                  AAAAAAAAAAAAAAAAAGATT
                      ____________________________________________________________
consensus                       ANNCCCCCCNTTTTTTTAAANNAAGGCCNAAAAAAAAAAAAAAAAAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+           TAAAGTACACAATGAAGGTATGGAAAAGAAACAAAAGTACAAATAGATCTGTACTCTTCA
JMFF013H24+           TAAAGTACACAATGAAGGTATGGAAAAGAAACAAAAGTACAAATAGATCTGTACTCTTCA
                      ____________________________________________________________
consensus             TAAAGTACACAATGAAGGTATGGAAAAGAAACAAAAGTACAAATAGATCTGTACTCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+           TTTATCCAGCCAACATGGCTACATGTACTAAAAACTGTATCCTTTGATTTGTAAAAGGCT
JMFF013H24+           TTTATCCAGCCAACATGGCTACATGTACTAAAAACTGTATCCTTTGATTTGTAAAAGGCT
                      ____________________________________________________________
consensus             TTTATCCAGCCAACATGGCTACATGTACTAAAAACTGTATCCTTTGATTTGTAAAAGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+           TGATGCTTATTTCCATGGCACAATTTGAAAACCCTCGATGCTAATCATGTTTAACTCATA
JMFF013H24+           TGATGCTTATTTCCATGGCACAATTTGAAAACCCTCGATGCTAATCATGTTTAACTCATA
                      ____________________________________________________________
consensus             TGATGCTTATTTCCATGGCACAATTTGAAAACCCTCGATGCTAATCATGTTTAACTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+           CTAGCACTATCCATTAATTTAAAACAAAACAAAACAAAATAAAAATAAAAGCCATTTTGG
JMFF013H24+           CTAGCACTATCCATTAATTTAAAACAAAACAAAACAAAATAAAAATAAAAGCCATTTTGG
                      ____________________________________________________________
consensus             CTAGCACTATCCATTAATTTAAAACAAAACAAAACAAAATAAAAATAAAAGCCATTTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF030I22+           CTTTTAAAAAGCAATTCAACTTTGCATATACAGAATGCATAAGAAAAAAGCAGAAAAAGC
JMFF013H24+           CTTTTAAAAAGCAATTCAACTTTGCATATACAGAATGCATAAGAAAAAAGCAGAAAAAGC
                      ____________________________________________________________
consensus             CTTTTAAAAAGCAATTCAACTTTGCATATACAGAATGCATAAGAAAAAAGCAGAAAAAGC