Contig 004509:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF034L24-                             TTCTGGCTCCGATTCATTGACAGAAGTTAAATCTGGTATTC
                      ____________________________________________________________
consensus                                TTCTGGCTCCGATTCATTGACAGAAGTTAAATCTGGTATTC
 
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rJMSF034L24-          CTTTAAACTGACCACCAGGGTTATAGATTACAATTTAATGACTGGAATCAGACTACACAT
                      ____________________________________________________________
consensus             CTTTAAACTGACCACCAGGGTTATAGATTACAATTTAATGACTGGAATCAGACTACACAT
 
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rJMSF034L24-          TTGGCAAGATGTGTGGTCTGATTTTGATATGGAAACCAGAAATTTTGAGATGCCTTATCC
                      ____________________________________________________________
consensus             TTGGCAAGATGTGTGGTCTGATTTTGATATGGAAACCAGAAATTTTGAGATGCCTTATCC
 
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rJMSF006E22-                                                ATTTCTAATTACATTNGCCNCA
rJMSF034L24-          AAAAGAACTGCAGCTATCATCACTAAGTGCAGTTTGGGATTTCTAATTACATTTGCCACA
                      ____________________________________________________________
consensus             AAAAGAACTGCAGCTATCATCACTAAGTGCAGTTTGGGATTTCTAATTACATTTGCCACA
 
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rJMSF006E22-          CAAAAACANCCACAAGANCNATGNCTTATNTCTAGCTTATAGCCTTATACCATGGCTCNA
rJMSF034L24-          CAAAAACAACCACAAGAACAATGGCTTATATCTAGCTTATAGCCTTATACCATGGC-AAA
                      ____________________________________________________________
consensus             CAAAAACAACCACAAGAACAATGGCTTATATCTAGCTTATAGCCTTATACCATGGCTCAA
 
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rJMSF006E22-          GCTCAAAGGTTCTATAATGGTGGCAACCCTTTCCAGTATGANTGTCCANGCAANGAAATT
rJMSF034L24-          GCTCAAAGGTTCTATAATGGTGGCAACCCTTTCCAGTATGAATGTCCAGGCAATGAAATT
                      ____________________________________________________________
consensus             GCTCAAAGGTTCTATAATGGTGGCAACCCTTTCCAGTATGAATGTCCAGGCAATGAAATT
 
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rJMSF006E22-          CATGGAGATTTTACTTAAAGCTTCAAAGTTCAAACTGCTTACCTTCNAAAGTCTGTCCNA
rJMSF034L24-          CATGGAGATTTTACTTAAAGCTTCAAAGTTCAAACTGCTTACCTTCAAAAGTCTGTCCAA
                      ____________________________________________________________
consensus             CATGGAGATTTTACTTAAAGCTTCAAAGTTCAAACTGCTTACCTTCAAAAGTCTGTCCAA
 
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rJMSF006E22-          AATCCCAGT                                                   
rJMSF034L24-          AATCCCAGTTCTTGGGAGCAACACTGTAAGAAGTGAGGGTGACTTTATCGCTGGTAGCTA
                      ____________________________________________________________
consensus             AATCCCAGTTCTTGGGAGCAACACTGTAAGAAGTGAGGGTGACTTTATCGCTGGTAGCTA
 
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rJMSF034L24-          TCTCGAACGAAAGAGGTTGGTTCTTCAAGTCAGCATTTATGTGCCAGATTTGGCCCCAAT
                      ____________________________________________________________
consensus             TCTCGAACGAAAGAGGTTGGTTCTTCAAGTCAGCATTTATGTGCCAGATTTGGCCCCAAT
 
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rJMSF034L24-          TCCTGCCCATTGGAAGCCATCCTGTTCTCGTGCCCTTAATTTTCACCGCAACGATGTCAC
JMSF034L24+                                                   TTTCACCGCAACGATGTCAC
                      ____________________________________________________________
consensus             TCCTGCCCATTGGAAGCCATCCTGTTCTCGTGCCCTTAATTTTCACCGCAACGATGTCAC
 
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rJMSF034L24-          CAGCACCCGCAACGTTGCTGATCAGCACCGACAGGGAGATTCCTGCACCGGTTAAGGTGA
JMSF034L24+           CAGCACCCGCAACGTTGCTGATCAGCACCGACAGGGAGATTCCTGCACCGGTTAAGGTGA
                      ____________________________________________________________
consensus             CAGCACCCGCAACGTTGCTGATCAGCACCGACAGGGAGATTCCTGCACCGGTTAAGGTGA
 
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rJMSF034L24-          ATCGCACTCCTCCTTCCTTTCTGCACTTTATTCTGCGGTACTGAATGGGCATATTCGAAG
JMSF034L24+           ATCGCACTCCTCCTTCCTTTCTGCACTTTATTCTGCGGTACTGAATGGGCATATTCGAAG
                      ____________________________________________________________
consensus             ATCGCACTCCTCCTTCCTTTCTGCACTTTATTCTGCGGTACTGAATGGGCATATTCGAAG
 
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rJMSF034L24-          CTTTCCNAAGGGC                                               
JMSF034L24+           CTTTCCAAAGGGCAATCTTTTCAAAAGCCTCGATAGGCAGCACGAAATGAGCGTTGGGGG
                      ____________________________________________________________
consensus             CTTTCCAAAGGGCAATCTTTTCAAAAGCCTCGATAGGCAGCACGAAATGAGCGTTGGGGG
 
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JMSF034L24+           GATTGCAATGGCCGCCGCCGTCGGGGTCGAAGCCGTAGTTGGGAGCGCAAAAATTGGTAG
JMFF013F06+                                             GTAGTTGGGAGCGCAAAAATTGGTAG
                      ____________________________________________________________
consensus             GATTGCAATGGCCGCCGCCGTCGGGGTCGAAGCCGTAGTTGGGAGCGCAAAAATTGGTAG
 
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JMSF034L24+           CGGTGACAATAATGGAAGTTCCGGGGATACACCACCGGAGATCCTCCACGCACCTGACCT
JMFF013F06+           CGGTGACAATAATGGAAGTTCCGGGGATACACCACCGGAGATCCTCCACGCACCTGACCT
                      ____________________________________________________________
consensus             CGGTGACAATAATGGAAGTTCCGGGGATACACCACCGGAGATCCTCCACGCACCTGACCT
 
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JMSF034L24+           CAAAGCACGCGCCGCAGATCTGACCCCTCTCGAACAGCACCGTGCTCAGCCCAGCCGTCG
JMSF006E22+                                    CCTCCCGAACAGCACCGTGCTCAGCCCAGCCGTCG
JMFF013F06+           CAAAGCACGCGCCGCAGATCTGACCCCTCTCGAACAGCACCGTGCTCAGCCCAGCCGTCG
                      ____________________________________________________________
consensus             CAAAGCACGCGCCGCAGATCTGACCCCTCTCGAACAGCACCGTGCTCAGCCCAGCCGTCG
 
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JMSF034L24+           CCTTGCCGTAGCCGCTCCTCTCCAAATCCCCGAACCCGCACGCGCCGCCCACCGCATCCC
JMSF006E22+           CCTTGCCGTAGCCGCTCCTCTCCAAATCCCCGAACCCGCACGCGCCGCCCACCGCATCCC
JMFF013F06+           CCTTGCCGTAGCCGCTCCTCTCCAAATCCCCGAACCCGCACGCGCCGCCCACCGCATCCC
                      ____________________________________________________________
consensus             CCTTGCCGTAGCCGCTCCTCTCCAAATCCCCGAACCCGCACGCGCCGCCCACCGCATCCC
 
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JMSF034L24+           GGGGATCCGCCGGCGCGTAGTAGGTCGCCCGCGCTGGCCGCCACTCGGATTGCACGGGCG
JMSF006E22+           GGGGATCCGCCGGCGCGTAGTAGGTCGCCCGCGCTGGCCGCCACTCGGATTGCACGGGCG
JMFF013F06+           GGGGATCCGCCGGCGCGTAGTAGGTCGCCCGCGCTGGCCGCCACTCGGATTGCACGGGCG
                      ____________________________________________________________
consensus             GGGGATCCGCCGGCGCGTAGTAGGTCGCCCGCGCTGGCCGCCACTCGGATTGCACGGGCG
 
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JMSF034L24+           CGGAGGAGGATGGCCAGTGGTAGTGTGAATGAACCGACGGCGTTATCGAACAGAGTATCA
JMSF006E22+           CGGAGGAGGATGGCCAGTGGTAGTGTGAATGAACCGACGGCGTTATCGAACAGAGTATCA
JMFF013F06+           CGGAGGAGGATGGCCAGTGGTAGTGTGAATGAACCGACGGCGTTATCGAACAGAGTATCA
                      ____________________________________________________________
consensus             CGGAGGAGGATGGCCAGTGGTAGTGTGAATGAACCGACGGCGTTATCGAACAGAGTATCA
 
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JMSF034L24+           CGGCGGCTAGAACACGTAGTACAGTTGCCGGCATGGTATTGTAGCTCTTATGGCTTCTGC
JMSF006E22+           CGGCGGCTAGAACACGTAGTACAGTTGCCGGCATGGTATTGTAGCTCTTATGGCTTCTGC
JMFF013F06+           CGGCGGCTAGAACACGTAGTACAGTTGCCGGCATGGTATTGTAGCTCTTATGGCTTCTGC
                      ____________________________________________________________
consensus             CGGCGGCTAGAACACGTAGTACAGTTGCCGGCATGGTATTGTAGCTCTTATGGCTTCTGC
 
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JMSF034L24+           CGGAGTCGGCGCCGACGCTGTGACAGCGGAAAATGCAAGCAAGGTGGTGTGCTTGTATAG
JMSF006E22+           CGGAGTCGGCGCCGACGCTGTGACAGCGGAAAATGCAAGCAAGGTGGTGTGCTTGTATAG
JMFF013F06+           CGGAGTCGGCGCCGACGCTGTGACAGCGGAAAATGCAAGCAAGGTGGTGTGCTTGTATAG
                      ____________________________________________________________
consensus             CGGAGTCGGCGCCGACGCTGTGACAGCGGAAAATGCAAGCAAGGTGGTGTGCTTGTATAG
 
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JMSF034L24+           ATTTTTTTAATTTT                                              
JMSF006E22+           ATTTTTTTAATTTT                                              
JMFF013F06+           ATTTTTTTAATTTTCCGGTTTCGAAATCGGCGGTGTGGGGTATTTACTTCCACTGTTGGT
                      ____________________________________________________________
consensus             ATTTTTTTAATTTTCCGGTTTCGAAATCGGCGGTGTGGGGTATTTACTTCCACTGTTGGT