| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008L24 | Sequence | 543 | 004504 (7) | ref|XP_009786348.1| | 2e-51 | PREDICTED: telomere repeat-binding factor 1-like [Nicotiana sylvestris] ref|XP_0 | 797 | 004504 (7) | ref|XP_006364407.1| | 2e-28 | PREDICTED: telomere repeat-binding factor 1-like isoform X1 [Solanum tuberosum] |
| JMFF012H18 | Sequence | 555 | 004504 (7) | ref|XP_009786348.1| | 2e-53 | PREDICTED: telomere repeat-binding factor 1-like [Nicotiana sylvestris] ref|XP_0 | 796 | 004504 (7) | ref|XP_006364407.1| | 4e-28 | PREDICTED: telomere repeat-binding factor 1-like isoform X1 [Solanum tuberosum] |
| JMFF024D23 | Sequence | 528 | 004504 (7) | ref|XP_009786348.1| | 1e-47 | PREDICTED: telomere repeat-binding factor 1-like [Nicotiana sylvestris] ref|XP_0 | 708 | 004504 (7) | ref|XP_009622790.1| | 103 | PREDICTED: single myb histone 5-like isoform X1 [Nicotiana tomentosiformis] |
| JMFF041K18 | Sequence | 601 | 004504 (7) | ref|XP_006364407.1| | 4e-82 | PREDICTED: telomere repeat-binding factor 1-like isoform X1 [Solanum tuberosum] | 549 | 022382 | |||
This contig is upended
. : . : . : . : . : . :
rJMFF024D23- TTCTTCCTTAATATCA
rJMFF012H18- TTTCTTCCTTAATATCA
rJMFF008L24- TTCTTCCTTAATATCA
____________________________________________________________
consensus TTTCTTCCTTAATATCA
. : . : . : . : . : . :
rJMFF024D23- TACACTCATTGAAGTGCATTGCAGATATAACATTACTTTGCATACTTTGCATTACACTTG
rJMFF012H18- TACACTCATTGAAGTGCATTGCAGATATAACATTACTTTGCATACTTTGCATTACACTTG
rJMFF008L24- TACACTCATTGAAGTGCATTGCAGATATAACATTACTTTGCATACTTTGCATTACACTTG
____________________________________________________________
consensus TACACTCATTGAAGTGCATTGCAGATATAACATTACTTTGCATACTTTGCATTACACTTG
. : . : . : . : . : . :
rJMFF024D23- TCTTCAATTTACTTAACTATAGACATCAATGCTACACGATGCACTTCAGACTTTTGTATA
rJMFF012H18- TCTTCAATTTACTTAACTATAGACATCAATGCTACACGATGCACTTCAGACTTTTGTATA
rJMFF008L24- TCTTCAATTTACTTAACTATAGACATCAATGCTACACGATGCACTTCAGACTTTTGTATA
____________________________________________________________
consensus TCTTCAATTTACTTAACTATAGACATCAATGCTACACGATGCACTTCAGACTTTTGTATA
. : . : . : . : . : . :
rJMFF024D23- GACAAAATTTTCCAGATTTACACTACTATCCACATAATTCTTCTTCTCTTTCTCTCATAG
rJMFF012H18- GACAAAATTTTCCAGATTTACACTACTATCCACATAATTCTTCTTCTCTTTCTCTCATAG
rJMFF008L24- GACAAAATTTTCCAGATTTACACTACTATCCACATAATTCTTCTTCTCTTTCTCTCATAG
____________________________________________________________
consensus GACAAAATTTTCCAGATTTACACTACTATCCACATAATTCTTCTTCTCTTTCTCTCATAG
. : . : . : . : . : . :
rJMFF024D23- CACCTTTCATCACAAAATCAAAGGGGTGGCGAGAATTATCAGACATGAATAGTCTGATAG
rJMFF012H18- CACCTTTCATCACAAAATCAAAGGGGTGGCGAGAATTATCAGACATGAATAGTCTGATAG
rJMFF008L24- CACCTTTCATCACAAAATCAAAGGGGTGGCGAGAATTATCAGACATGAATAGTCTGATAG
____________________________________________________________
consensus CACCTTTCATCACAAAATCAAAGGGGTGGCGAGAATTATCAGACATGAATAGTCTGATAG
. : . : . : . : . : . :
rJMFF024D23- TTCAATGCCTTAGTTGCTGCTTCAGCAAAACACCGGGCCGCTTCTGCCTCTGCTTCTGCC
rJMFF012H18- TTCAATGCCTTAGTTGCTGCTTCAGCAAAACACCGGGCCGCTTCTGCCTCTGCTTCTGCC
rJMFF008L24- TTCAATGCCTTAGTTGCTGCTTCAGCAAAACACCGGGCCGCTTCTGCCTCTGCTTCTGCC
____________________________________________________________
consensus TTCAATGCCTTAGTTGCTGCTTCAGCAAAACACCGGGCCGCTTCTGCCTCTGCTTCTGCC
. : . : . : . : . : . :
rJMFF024D23- TCCTCAGCTTCCCTTGCAGCCCATTCGGCCTCCGCAATAGCAGCTTCTGCTTCTGCAACT
rJMFF012H18- TCCTCAGCTTCCCTTGCAGCCCATTCGGCCTCCGCAATAGCAGCTTCTGCTTCTGCAACT
rJMFF008L24- TCCTCAGCTTCCCTTGCAGCCCATTCGGCCTCCGCAATAGCAGCTTCTGCTTCTGCAACT
____________________________________________________________
consensus TCCTCAGCTTCCCTTGCAGCCCATTCGGCCTCCGCAATAGCAGCTTCTGCTTCTGCAACT
. : . : . : . : . : . :
rJMFF024D23- GCTTGTGCGGCAGCTGCAGCAGCATCTTGTGCATTCATGTTCCTCATTTTCTCTAGCTCA
rJMFF012H18- GCTTGTGCGGCAGCTGCAGCAGCATCTTGTGCATTCATGTTCCTCATTTTCTCTAGCTCA
rJMFF008L24- GCTTGTGCGGCAGCTGCAGCAGCATCTTGTGCATTCATGTTCCTCATTTTCTCTAGCTCA
____________________________________________________________
consensus GCTTGTGCGGCAGCTGCAGCAGCATCTTGTGCATTCATGTTCCTCATTTTCTCTAGCTCA
. : . : . : . : . : . :
rJMFF024D23- GCATCAATCTGTGCTTTAGTCAGTATTCTTATTCCATTCTTTTCCGGCATTGGAGGATGT
rJMFF012H18- GCATCAATCTGTGCTTTAGTCAGTATTCTTATTCCATTCTTTTCCGGCATTGGAGGATGT
rJMFF008L24- GCATCAATCTGTGCTTTAGTCAGTATTCTTATTCCATTCTTTTCCGGCATTGGAGGATGT
____________________________________________________________
consensus GCATCAATCTGTGCTTTAGTCAGTATTCTTATTCCATTCTTTTCCGGCATTGGAGGATGT
. : . : . : . : . : . :
rJMFF024D23- GTTTGCTTTCCCTCCAGAAGCAACAGAGAAGGATCCCCCTTTACATCAATAGACAATGAC
rJMFF012H18- GTTTGCTTTCCCTCCAGAAGCAACAGAGAAGGATCCCCCTTTACATCAATAGACAATGAC
rJMFF008L24- GTTTGCTTTCCCTCCAGAAGCAACAGAGAAGGATCCCCCTTTACATCAATAGACAATGAC
____________________________________________________________
consensus GTTTGCTTTCCCTCCAGAAGCAACAGAGAAGGATCCCCCTTTACATCAATAGACAATGAC
. : . : . : . : . : . :
rJMFF024D23- ATTCCACTCGGTGCAATCCTGTAATAATGCTTCACCTTTATGAGCCTTCTTCGTTCTGTC
rJMFF012H18- ATTCCACTCGGTGCAATCCTGTAATAATGCTTCACCTTTATGAGCCTTCTTCGTTCTGTC
rJMFF008L24- ATTCCACTCGGTGCAATCCTGTAATAATGCTTCACCTTTATGAGCCTTCTTCGTTCTGTC
JMFF041K18+ GCAATCCTGTAATAATGCTTCACCTTTAT-AGCCCTCTTCGTTCTGTC
____________________________________________________________
consensus ATTCCACTCGGTGCAATCCTGTAATAATGCTTCACCTTTATGAGCCTTCTTCGTTCTGTC
. : . : . : . : . : . :
rJMFF024D23- AAGTCCTTCAAATTTGCCACTATCAGTCTTTCCAAGTTTGTTGGTGCCTTGTAGTGCTCC
rJMFF012H18- AAGTCCTTCAAATTTGCCACTATCAGTCTTTCCAAGTTTGTTGGTGCCTTGTAGTGCTCC
rJMFF008L24- AAGTCCTTCAAATTTGCCACTATCAGTCTTTCCAAGTTTGTTGGTGCCTTGTAGTGCTCC
JMFF041K18+ AAGTCCTTCAAATTTGCCACTATCAGTCTTTCCAAGTTTGTTGGTGCCTAGTAGTGCTCC
____________________________________________________________
consensus AAGTCCTTCAAATTTGCCACTATCAGTCTTTCCAAGTTTGTTGGTGCCTTGTAGTGCTCC
. : . : . : . : . : . :
rJMFF024D23- TCAATGTACATGG
rJMFF012H18- TCAATGTACATGGGATATTGCATTTCGACTAN-ATCCACGANGTTCCTTCAGCTTGGCTA
rJMFF008L24- TCAATGTACAT-GGATATTGCATTTCGACTAGAATCCACGANGTTCCTTCAGCTTGGCTA
JMFF041K18+ TCAATGTACAT-GGATATTGCATTTCGACTAG-ATCCACGAGGTTCCTTCAGCTTGGCTA
____________________________________________________________
consensus TCAATGTACAT-GGATATTGCATTTCGACTAG-ATCCACGAGGTTCCTTCAGCTTGGCTA
. : . : . : . : . : . :
rJMFF012H18- TAGCCTCCATTATTAGATCACCCAAGCTTGTTATTGGCTTCTTANAACCAACATCTGGCA
rJMFF008L24- TAGCCTCCATTATTAGATCACCCAAGCTTGNTATTGGCTTCTTANAACCAACATCTGGCA
JMFF041K18+ TAGCCTCCACTATTAGATCACCCAAGCTTGTTATTGGCTTCTTAGAACCAACATCTGGCA
JMFF008L24+ GGCA
JMFF012H18+ GAACCAACATCTGGCA
____________________________________________________________
consensus TAGCCTCCATTATTAGATCACCCAAGCTTGTTATTGGCTTCTTAGAACCAACATCTGGCA
. : . : . : . : . : . :
JMFF041K18+ GTGTTTCACTAACTGTTGCAAGGGGCTTAGCATCA-GGGACTTCCATATCATTGTCAGCC
JMFF008L24+ GTGTTTCACTAACTGTTGCAAGGGGCTTAGCATCA-GGGACTTCCATATCATTGTCAGCC
JMFF024D23+ CTGTTGCAAGGGGCTTAGCATCAGGGGACTTCCATATCATTGTCAGCC
JMFF012H18+ GTGTTTCACTAACTGTTGCAAGGGGCTTAGCATCA-GGGACTTCCATATCATTGTCAGCC
____________________________________________________________
consensus GTGTTTCACTAACTGTTGCAAGGGGCTTAGCATCA-GGGACTTCCATATCATTGTCAGCC
. : . : . : . : . : . :
JMFF041K18+ AGAGTGGTAAGAGCCATAGAGTCATCATCACGTTTGGATATAGGCTGAGTACTTTTGCTA
JMFF008L24+ AGAGTGGTAAGAGCCATAGAGTCATCATCACGTTTGGATATAGGCTGAGTACTTTTGCTA
JMFF024D23+ AGAGTGGTAAGAGCCATAGAGTCATCATCACGTTTGGATATAGGCTGAGTACTTTTGCTA
JMFF012H18+ AGAGTGGTAAGAGCCATAGAGTCATCATCACGTTTGGATATAGGCTGAGTACTTTTGCTA
____________________________________________________________
consensus AGAGTGGTAAGAGCCATAGAGTCATCATCACGTTTGGATATAGGCTGAGTACTTTTGCTA
. : . : . : . : . : . :
JMFF041K18+ GCAATCTTACCCCGCTGCCGAGACCCCCACCCATTTGCCATGACATGGAGATTTCTCCAT
JMFF008L24+ GCAATCTTACCCCGCTGCCGAGACCCCCACCCATTTGCCATGACATGGAGATTTCTCCAT
JMFF024D23+ GCAATCTTACCCCGCTGCCGAGACCCCCACCCATTTGCCATGACATGGAGATTTCTCCAT
JMFF012H18+ GCAATCTTACCCCGCTGCCGAGACCCCCACCCATTTGCCATGACATGGAGATTTCTCCAT
____________________________________________________________
consensus GCAATCTTACCCCGCTGCCGAGACCCCCACCCATTTGCCATGACATGGAGATTTCTCCAT
. : . : . : . : . : . :
JMFF041K18+ TTATCCTTAAGGTCAACATTAGAGCGAGCACGCAAGACCGGAGCAAAGTCTGGATCTTTG
JMFF008L24+ TTATCCTTAAGGTCAACATTAGAGCGAGCACGCAAGACCGGAGCAAAGTCTGGATCTTTG
JMFF024D23+ TTATCCTTAAGGTCAACATTAGAGCGAGCACGCAAGACCGGAGCAAAGTCTGGATCTTTG
JMFF012H18+ TTATCCTTAAGGTCAACATTAGAGCGAGCACGCAAGACCGGAGCAAAGTCTGGATCTTTG
____________________________________________________________
consensus TTATCCTTAAGGTCAACATTAGAGCGAGCACGCAAGACCGGAGCAAAGTCTGGATCTTTG
. : . : . : . : . : . :
JMFF041K18+ AGTATGGTGCTCCATTTCCCCACCCCATACTTAGCTACACCAGCTTTAAGAGCAGCTTCT
JMFF008L24+ AGTATGGTGCTCCATTTCCCCACCCCATACTTAGCTACACCAGCTTTAAGAGCAGCTTCT
JMFF024D23+ AGTATGGTGCTCCATTTCCCCACCCCATACTTAGCTACACCAGCTTTAAGAGCAGCTTCT
JMFF012H18+ AGTATGGTGCTCCATTTCCCCACCCCATACTTAGCTACACCAGCTTTAAGAGCAGCTTCT
____________________________________________________________
consensus AGTATGGTGCTCCATTTCCCCACCCCATACTTAGCTACACCAGCTTTAAGAGCAGCTTCT
. : . : . : . : . : . :
JMFF041K18+ TCTTCTGATGTCCACTTCTGCTTTGGGGCACCCATTGATATGTTGACGCTCCACTGGAAA
JMFF008L24+ TCTTCTGATGTCCACTTCTGCTTTGGGGCACCCATTGATATGTTGACGCTCCACTGGAAA
JMFF024D23+ TCTTCTGATGTCCACTTCTGCTTTGGGGCACCCATTGATATGTTGACGCTCCACTGGAAA
JMFF012H18+ TCTTCTGATGTCCACTTCTGCTTTGGGGCACCCATTGATATGTTGACGCTCCACTGGAAA
____________________________________________________________
consensus TCTTCTGATGTCCACTTCTGCTTTGGGGCACCCATTGATATGTTGACGCTCCACTGGAAA
. : . : . : . : . : . :
JMFF041K18+ CTTTAAACTCTCCAACT
JMFF008L24+ CTTTAAACTCTCCAACTTTAAGTCGAACCAAATAGAAGGAGCGGCGCAGAATCTCTGATG
JMFF024D23+ CTTTAAACTCTCCAACTTTAAGTCGAACCAAATAGAAGGAGCGGCGCAGAATCTCTGATG
JMFF012H18+ CTTTAAACTCTCCAACTTTAAGTCGAACCAAATAGAAGGAGCGGCGCAGAATCTCTGATG
____________________________________________________________
consensus CTTTAAACTCTCCAACTTTAAGTCGAACCAAATAGAAGGAGCGGCGCAGAATCTCTGATG
. : . : . : . : . : . :
JMFF008L24+ AGTCAAAGGTATGTCGGCGTCACGTTGAAGTTAGGCAATATCGTCTTGCACTCGGTAGTT
JMFF024D23+ AGTCAAAGGTATGTCGGCGTCACGTTGAAGTTAGGCAATATCGTCTTGCACTCGGTAGTT
JMFF012H18+ AGTCAAAGGTATGTCGGCGTCACGTTGAAGTTAGGCAATATCGTCTTGCACTCGGTAGTT
____________________________________________________________
consensus AGTCAAAGGTATGTCGGCGTCACGTTGAAGTTAGGCAATATCGTCTTGCACTCGGTAGTT
. : . : . : . : . : . :
JMFF008L24+ GGGAGAACAGTGAGAATGAAAAACATCTGAAACCCTAAAGAGGTAGGAGCAATCGT
JMFF024D23+ GGGAGAACAGTGAGAATGAAAAACATCTGAAACCCTAAAGAGGTAGGAGCAATCGT
JMFF012H18+ GGGAGAACAGTGAGAATGAAAAACATCTGAAACCCTAAAGAGGTAGGAGCAATCGTATGC
____________________________________________________________
consensus GGGAGAACAGTGAGAATGAAAAACATCTGAAACCCTAAAGAGGTAGGAGCAATCGTATGC